Coordinate-aware organelle record

Teucrium polium chloroplast genome

Available PV340614.1 150,026 bp 130 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbpsaI · gene · 1,719-1,829 bp · + strandycf4 · gene · 2,249-2,803 bp · + strandcemA · gene · 3,432-4,121 bp · + strandpetA · gene · 4,347-5,309 bp · + strandpsbJ · gene · 6,183-6,305 bp · − strandpsbL · gene · 6,447-6,563 bp · − strandpsbF · gene · 6,587-6,706 bp · − strandpsbE · gene · 6,721-6,972 bp · − strandpetL · gene · 7,898-7,993 bp · + strandpetG · gene · 8,168-8,281 bp · + strandtrnW-CCA · gene · 8,404-8,477 bp · − strandtrnP-UGG · gene · 8,638-8,711 bp · − strandpsaJ · gene · 8,995-9,129 bp · + strandrpl33 · gene · 9,611-9,811 bp · + strandrps18 · gene · 9,973-10,278 bp · + strandrpl20 · gene · 10,515-10,901 bp · − strandrps12 · gene · 11,763-38,586 bp · − strandrps12 · gene · 11,763-79,652 bp · + strandclpP · gene · 12,041-13,983 bp · − strandpsbB · gene · 14,430-15,956 bp · + strandpsbT · gene · 16,133-16,240 bp · + strandpsbN · gene · 16,301-16,432 bp · − strandpsbH · gene · 16,520-16,750 bp · + strandpetB · gene · 16,872-18,225 bp · + strandpetD · gene · 18,414-19,166 bp · + strandrpoA · gene · 19,824-20,849 bp · − strandrps11 · gene · 20,920-21,336 bp · − strandrpl36 · gene · 21,438-21,551 bp · − strandinfA · gene · 21,662-21,895 bp · − strandrps8 · gene · 22,020-22,424 bp · − strandrpl14 · gene · 22,599-22,967 bp · − strandrpl16 · gene · 23,094-24,365 bp · − strandrps3 · gene · 24,515-25,159 bp · − strandrpl22 · gene · 25,144-25,611 bp · − strandrps19 · gene · 25,671-25,949 bp · − strandrpl2 · gene · 26,003-27,498 bp · − strandrpl23 · gene · 27,517-27,798 bp · − strandtrnI-CAU · gene · 27,964-28,037 bp · − strandycf2 · gene · 28,203-33,551 bp · + strandycf15 · gene · 33,651-33,899 bp · + strandtrnL-CAA · gene · 34,167-34,247 bp · − strandndhB · gene · 34,797-37,008 bp · − strandrps7 · gene · 37,272-37,739 bp · − strandtrnV-GAC · gene · 40,203-40,274 bp · + strandrrn16 · gene · 40,505-41,991 bp · + strandtrnI-GAU · gene · 42,290-43,312 bp · + strandtrnA-UGC · gene · 43,377-44,257 bp · + strandrrn23 · gene · 44,434-47,243 bp · + strandrrn4.5 · gene · 47,342-47,444 bp · + strandrrn5 · gene · 47,705-47,825 bp · + strandtrnR-ACG · gene · 48,069-48,142 bp · + strandtrnN-GUU · gene · 48,713-48,785 bp · − strandndhF · gene · 50,191-52,407 bp · − strandrpl32 · gene · 52,917-53,093 bp · + strandtrnL-UAG · gene · 53,528-53,607 bp · + strandccsA · gene · 53,642-54,676 bp · + strandndhD · gene · 55,850-56,218 bp · − strandpsaC · gene · 56,539-56,784 bp · − strandndhE · gene · 57,035-57,340 bp · − strandndhG · gene · 57,511-58,041 bp · − strandndhI · gene · 58,386-58,892 bp · − strandndhA · gene · 58,973-61,119 bp · − strandndhH · gene · 61,121-62,302 bp · − strandrps15 · gene · 62,399-62,671 bp · − strandycf1 · gene · 63,076-68,265 bp · − strandtrnN-GUU · gene · 68,660-68,732 bp · + strandtrnR-ACG · gene · 69,303-69,376 bp · − strandrrn5 · gene · 69,620-69,740 bp · − strandrrn4.5 · gene · 70,001-70,103 bp · − strandrrn23 · gene · 70,202-73,011 bp · − strandtrnA-UGC · gene · 73,188-74,068 bp · − strandtrnI-GAU · gene · 74,133-75,155 bp · − strandrrn16 · gene · 75,454-76,940 bp · − strandtrnV-GAC · gene · 77,171-77,242 bp · − strandrps7 · gene · 79,706-80,173 bp · + strandndhB · gene · 80,437-82,648 bp · + strandtrnL-CAA · gene · 83,198-83,278 bp · + strandycf15 · gene · 83,546-83,794 bp · − strandycf2 · gene · 83,894-89,242 bp · − strandtrnI-CAU · gene · 89,408-89,481 bp · + strandrpl23 · gene · 89,647-89,928 bp · + strandrpl2 · gene · 89,947-91,442 bp · + strandrps19 · gene · 91,496-91,774 bp · + strandrpl22 · gene · 91,834-92,301 bp · + strandtrnH-GUG · gene · 92,718-92,792 bp · − strandpsbA · gene · 93,188-94,246 bp · − strandtrnK-UUU · gene · 94,552-97,103 bp · − strandmatK · gene · 94,783-96,504 bp · − strandrps16 · gene · 97,871-98,892 bp · − strandtrnQ-UUG · gene · 99,723-99,794 bp · − strandpsbK · gene · 100,122-100,322 bp · + strandpsbI · gene · 100,715-100,825 bp · + strandtrnS-GCU · gene · 100,940-101,027 bp · − strandtrnR-UCU · gene · 102,670-102,741 bp · + strandatpA · gene · 102,853-104,376 bp · − strandatpF · gene · 104,925-105,736 bp · − strandatpH · gene · 106,093-106,338 bp · − strandatpI · gene · 107,338-108,081 bp · − strandrps2 · gene · 108,381-109,040 bp · − strandrpoC2 · gene · 109,354-113,484 bp · − strandrpoC1 · gene · 113,640-116,484 bp · − strandrbcL · gene · 117,203-118,663 bp · − strandatpB · gene · 119,433-120,929 bp · + strandatpE · gene · 120,926-121,327 bp · + strandtrnM-CAU · gene · 121,521-121,593 bp · − strandtrnV-UAC · gene · 121,767-122,419 bp · + strandndhC · gene · 123,338-123,700 bp · + strandndhK · gene · 123,754-124,431 bp · + strandndhJ · gene · 124,537-125,013 bp · + strandtrnF-GAA · gene · 125,675-125,747 bp · − strandtrnL-UAA · gene · 126,064-126,630 bp · − strandtrnT-UGU · gene · 127,342-127,414 bp · + strandrps4 · gene · 127,750-128,349 bp · + strandtrnS-GGA · gene · 128,642-128,728 bp · − strandycf3 · gene · 129,359-131,315 bp · + strandpsaB · gene · 134,317-136,521 bp · + strandrps14 · gene · 136,644-136,946 bp · + strandtrnfM-CAU · gene · 137,082-137,155 bp · + strandtrnG-UCC · gene · 137,330-137,400 bp · − strandpsbZ · gene · 137,670-137,858 bp · − strandtrnS-UGA · gene · 138,181-138,272 bp · + strandpsbC · gene · 138,531-139,952 bp · − strandpsbD · gene · 139,900-140,961 bp · − strandtrnE-UUC · gene · 142,834-142,906 bp · + strandtrnY-GUA · gene · 142,966-143,049 bp · + strandtrnD-GUC · gene · 143,158-143,231 bp · + strandpsbM · gene · 143,750-143,854 bp · + strandpetN · gene · 144,834-144,929 bp · − strandtrnC-GCA · gene · 145,590-145,670 bp · − strandrpoB · gene · 146,847-146,954 bp · + strandTeucrium poliumANNOTATED PLASTOMEPV340614.1150,026 bp · 130 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionPhotosystem IOtherCytochromePhotosystem IiTranslation RnaRibosomal ProteinRna PolymeraseNad DehydrogenaseRibosomal RnaAtp SynthaseVerified annotationSource: NCBI GenBankAccession: PV340614.1Features: 130 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features
GeneTypeGroupStrandStartEndLength
psaIgenephotosystem-i+17181829111
ycf4geneother+22482803555
cemAgeneother+34314121690
petAgenecytochrome+43465309963
psbJgenephotosystem-ii−61826305123
psbLgenephotosystem-ii−64466563117
psbFgenephotosystem-ii−65866706120
psbEgenephotosystem-ii−67206972252
petLgenecytochrome+7897799396
petGgenecytochrome+81678281114
trnW-CCAgenetranslation-rna−8403847774
trnP-UGGgenetranslation-rna−8637871174
psaJgenephotosystem-i+89949129135
rpl33generibosomal-protein+96109811201
rps18generibosomal-protein+997210278306
rpl20generibosomal-protein−1051410901387
rps12generibosomal-protein−117623858626824
rps12generibosomal-protein+117627965267890
clpPgeneother−12040139831943
psbBgenephotosystem-ii+14429159561527
psbTgenephotosystem-ii+1613216240108
psbNgenephotosystem-ii−1630016432132
psbHgenephotosystem-ii+1651916750231
petBgenecytochrome+16871182251354
petDgenecytochrome+1841319166753
rpoAgenerna-polymerase−19823208491026
rps11generibosomal-protein−2091921336417
rpl36generibosomal-protein−2143721551114
infAgeneother−2166121895234
rps8generibosomal-protein−2201922424405
rpl14generibosomal-protein−2259822967369
rpl16generibosomal-protein−23093243651272
rps3generibosomal-protein−2451425159645
rpl22generibosomal-protein−2514325611468
rps19generibosomal-protein−2567025949279
rpl2generibosomal-protein−26002274981496
rpl23generibosomal-protein−2751627798282
trnI-CAUgenetranslation-rna−279632803774
ycf2geneother+28202335515349
ycf15geneother+3365033899249
trnL-CAAgenetranslation-rna−341663424781
ndhBgenenad-dehydrogenase−34796370082212
rps7generibosomal-protein−3727137739468
trnV-GACgenetranslation-rna+402024027472
rrn16generibosomal-rna+40504419911487
trnI-GAUgenetranslation-rna+42289433121023
trnA-UGCgenetranslation-rna+4337644257881
rrn23generibosomal-rna+44433472432810
rrn4.5generibosomal-rna+4734147444103
rrn5generibosomal-rna+4770447825121
trnR-ACGgenetranslation-rna+480684814274
trnN-GUUgenetranslation-rna−487124878573
ndhFgenenad-dehydrogenase−50190524072217
rpl32generibosomal-protein+5291653093177
trnL-UAGgenetranslation-rna+535275360780
ccsAgeneother+53641546761035
ndhDgenenad-dehydrogenase−5584956218369
psaCgenephotosystem-i−5653856784246
ndhEgenenad-dehydrogenase−5703457340306
ndhGgenenad-dehydrogenase−5751058041531
ndhIgenenad-dehydrogenase−5838558892507
ndhAgenenad-dehydrogenase−58972611192147
ndhHgenenad-dehydrogenase−61120623021182
rps15generibosomal-protein−6239862671273
ycf1geneother−63075682655190
trnN-GUUgenetranslation-rna+686596873273
trnR-ACGgenetranslation-rna−693026937674
rrn5generibosomal-rna−6961969740121
rrn4.5generibosomal-rna−7000070103103
rrn23generibosomal-rna−70201730112810
trnA-UGCgenetranslation-rna−7318774068881
trnI-GAUgenetranslation-rna−74132751551023
rrn16generibosomal-rna−75453769401487
trnV-GACgenetranslation-rna−771707724272
rps7generibosomal-protein+7970580173468
ndhBgenenad-dehydrogenase+80436826482212
trnL-CAAgenetranslation-rna+831978327881
ycf15geneother−8354583794249
ycf2geneother−83893892425349
trnI-CAUgenetranslation-rna+894078948174
rpl23generibosomal-protein+8964689928282
rpl2generibosomal-protein+89946914421496
rps19generibosomal-protein+9149591774279
rpl22generibosomal-protein+9183392301468
trnH-GUGgenetranslation-rna−927179279275
psbAgenephotosystem-ii−93187942461059
trnK-UUUgenetranslation-rna−94551971032552
matKgeneother−94782965041722
rps16generibosomal-protein−97870988921022
trnQ-UUGgenetranslation-rna−997229979472
psbKgenephotosystem-ii+100121100322201
psbIgenephotosystem-ii+100714100825111
trnS-GCUgenetranslation-rna−10093910102788
trnR-UCUgenetranslation-rna+10266910274172
atpAgeneatp-synthase−1028521043761524
atpFgeneatp-synthase−104924105736812
atpHgeneatp-synthase−106092106338246
atpIgeneatp-synthase−107337108081744
rps2generibosomal-protein−108380109040660
rpoC2generna-polymerase−1093531134844131
rpoC1generna-polymerase−1136391164842845
rbcLgeneother−1172021186631461
atpBgeneatp-synthase+1194321209291497
atpEgeneatp-synthase+120925121327402
trnM-CAUgenetranslation-rna−12152012159373
trnV-UACgenetranslation-rna+121766122419653
ndhCgenenad-dehydrogenase+123337123700363
ndhKgenenad-dehydrogenase+123753124431678
ndhJgenenad-dehydrogenase+124536125013477
trnF-GAAgenetranslation-rna−12567412574773
trnL-UAAgenetranslation-rna−126063126630567
trnT-UGUgenetranslation-rna+12734112741473
rps4generibosomal-protein+127749128349600
trnS-GGAgenetranslation-rna−12864112872887
ycf3geneother+1293581313151957
psaBgenephotosystem-i+1343161365212205
rps14generibosomal-protein+136643136946303
trnfM-CAUgenetranslation-rna+13708113715574
trnG-UCCgenetranslation-rna−13732913740071
psbZgenephotosystem-ii−137669137858189
trnS-UGAgenetranslation-rna+13818013827292
psbCgenephotosystem-ii−1385301399521422
psbDgenephotosystem-ii−1398991409611062
trnE-UUCgenetranslation-rna+14283314290673
trnY-GUAgenetranslation-rna+14296514304984
trnD-GUCgenetranslation-rna+14315714323174
psbMgenephotosystem-ii+143749143854105
petNgenecytochrome−14483314492996
trnC-GCAgenetranslation-rna−14558914567081
rpoBgenerna-polymerase+146846146954108

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources