Teucrium stocksianum subsp. stocksianum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · MH325133.1 · 4–78 bp · −
psbA · MH325133.1 · 306–1,364 bp · −
trnK-UUU · MH325133.1 · 1,656–4,198 bp · −
matK · MH325133.1 · 1,886–3,448 bp · −
rps16 · MH325133.1 · 5,102–6,280 bp · −
trnQ-UUG · MH325133.1 · 6,986–7,057 bp · −
trnS-GCU · MH325133.1 · 8,202–8,289 bp · −
atpA · MH325133.1 · 10,085–11,608 bp · −
atpF · MH325133.1 · 11,683–12,932 bp · −
atpH · MH325133.1 · 13,288–13,533 bp · −
atpI · MH325133.1 · 14,486–15,229 bp · −
rps2 · MH325133.1 · 15,445–16,104 bp · −
rpoC2 · MH325133.1 · 16,382–20,512 bp · −
rpoC1 · MH325133.1 · 20,668–23,542 bp · −
rpoB · MH325133.1 · 23,548–26,760 bp · −
psbM · MH325133.1 · 28,963–29,067 bp · −
trnD-GUC · MH325133.1 · 29,585–29,658 bp · −
trnY-GUA · MH325133.1 · 29,767–29,850 bp · −
trnE-UUC · MH325133.1 · 29,910–29,982 bp · −
trnS-UGA · MH325133.1 · 34,560–34,651 bp · −
trnfM-CAU · MH325133.1 · 35,684–35,757 bp · −
rps14 · MH325133.1 · 35,893–36,195 bp · −
psaB · MH325133.1 · 36,318–38,522 bp · −
psaA · MH325133.1 · 38,548–40,800 bp · −
ycf3 · MH325133.1 · 41,501–43,455 bp · −
rps4 · MH325133.1 · 44,281–44,880 bp · −
trnT-UGU · MH325133.1 · 45,223–45,295 bp · −
ndhJ · MH325133.1 · 47,606–48,082 bp · −
ndhK · MH325133.1 · 48,188–49,039 bp · −
ndhC · MH325133.1 · 48,919–49,281 bp · −
trnV-UAC · MH325133.1 · 50,081–50,733 bp · −
atpE · MH325133.1 · 51,174–51,575 bp · −
atpB · MH325133.1 · 51,572–53,068 bp · −
psbJ · MH325133.1 · 61,991–62,113 bp · −
psbL · MH325133.1 · 62,255–62,371 bp · −
psbF · MH325133.1 · 62,395–62,514 bp · −
psbE · MH325133.1 · 62,529–62,780 bp · −
trnW-CCA · MH325133.1 · 64,194–64,267 bp · −
trnP-UGG · MH325133.1 · 64,428–64,501 bp · −
rpl20 · MH325133.1 · 66,327–66,713 bp · −
rps12 · MH325133.1 · 67,575–67,688 bp · −
rps12 · MH325133.1 · 94,966–95,762 bp · −
clpP · MH325133.1 · 67,816–69,761 bp · −
psbN · MH325133.1 · 72,079–72,210 bp · −
rpoA · MH325133.1 · 75,601–76,626 bp · −
rps11 · MH325133.1 · 76,697–77,113 bp · −
rpl36 · MH325133.1 · 77,215–77,328 bp · −
infA · MH325133.1 · 77,438–77,671 bp · −
rps8 · MH325133.1 · 77,802–78,251 bp · −
rpl14 · MH325133.1 · 78,380–78,748 bp · −
rpl16 · MH325133.1 · 78,875–80,118 bp · −
rps3 · MH325133.1 · 80,268–80,912 bp · −
rpl22 · MH325133.1 · 80,897–81,364 bp · −
rps19 · MH325133.1 · 81,424–81,705 bp · −
rpl2 · MH325133.1 · 81,758–83,261 bp · −
rpl23 · MH325133.1 · 83,280–83,561 bp · −
trnI-CAU · MH325133.1 · 83,727–83,800 bp · −
trnL-CAA · MH325133.1 · 91,340–91,420 bp · −
ndhB · MH325133.1 · 91,970–94,181 bp · −
rps7 · MH325133.1 · 94,445–94,912 bp · −
orf56 · MH325133.1 · 101,048–101,188 bp · −
trnN-GUU · MH325133.1 · 105,849–105,921 bp · −
ndhF · MH325133.1 · 107,259–109,511 bp · −
ndhD · MH325133.1 · 111,965–113,353 bp · −
psaC · MH325133.1 · 113,582–113,827 bp · −
ndhE · MH325133.1 · 114,078–114,383 bp · −
ndhG · MH325133.1 · 114,606–115,136 bp · −
ndhI · MH325133.1 · 115,491–115,997 bp · −
ndhA · MH325133.1 · 116,078–118,148 bp · −
ndhH · MH325133.1 · 118,150–119,331 bp · −
rps15 · MH325133.1 · 119,428–119,745 bp · −
ycf1 · MH325133.1 · 120,073–125,502 bp · −
trnR-ACG · MH325133.1 · 126,476–126,549 bp · −
rrn5 · MH325133.1 · 126,793–126,913 bp · −
rrn4.5 · MH325133.1 · 127,143–127,245 bp · −
rrn23 · MH325133.1 · 127,344–130,153 bp · −
trnA-UGC · MH325133.1 · 130,330–131,208 bp · −
trnI-GAU · MH325133.1 · 131,273–132,296 bp · −
rrn16 · MH325133.1 · 132,595–134,084 bp · −
trnV-GAC · MH325133.1 · 134,313–134,384 bp · −
ycf15 · MH325133.1 · 140,688–140,936 bp · −
ycf2 · MH325133.1 · 141,036–147,872 bp · −
psbK · MH325133.1 · 7,394–7,585 bp · +
psbI · MH325133.1 · 7,930–8,088 bp · +
trnR-UCU · MH325133.1 · 9,902–9,973 bp · +
trnC-GCA · MH325133.1 · 27,926–28,006 bp · +
petN · MH325133.1 · 28,299–28,394 bp · +
trnT-GGU · MH325133.1 · 30,396–30,467 bp · +
trnM-CAU · MH325133.1 · 30,402–30,460 bp · +
psbD · MH325133.1 · 31,871–32,932 bp · +
psbC · MH325133.1 · 32,880–34,301 bp · +
psbZ · MH325133.1 · 34,980–35,168 bp · +
trnG-UCC · MH325133.1 · 35,439–35,509 bp · +
trnS-GGA · MH325133.1 · 43,885–43,971 bp · +
trnL-UAA · MH325133.1 · 46,002–46,568 bp · +
trnF-GAA · MH325133.1 · 46,879–46,951 bp · +
trnM-CAU · MH325133.1 · 50,908–50,980 bp · +
rbcL · MH325133.1 · 53,843–55,303 bp · +
accD · MH325133.1 · 55,546–57,051 bp · +
psaI · MH325133.1 · 57,509–57,619 bp · +
ycf4 · MH325133.1 · 58,041–58,595 bp · +
cemA · MH325133.1 · 59,247–59,936 bp · +
petA · MH325133.1 · 60,162–61,124 bp · +
petL · MH325133.1 · 63,688–63,783 bp · +
petG · MH325133.1 · 63,958–64,071 bp · +
psaJ · MH325133.1 · 64,807–64,941 bp · +
rpl33 · MH325133.1 · 65,423–65,623 bp · +
rps18 · MH325133.1 · 65,785–66,090 bp · +
rps12 · MH325133.1 · 135,998–136,794 bp · +
psbB · MH325133.1 · 70,208–71,734 bp · +
psbT · MH325133.1 · 71,902–72,018 bp · +
psbH · MH325133.1 · 72,298–72,528 bp · +
petB · MH325133.1 · 72,650–74,002 bp · +
petD · MH325133.1 · 74,198–75,432 bp · +
ycf2 · MH325133.1 · 83,888–90,724 bp · +
ycf15 · MH325133.1 · 90,824–91,072 bp · +
trnV-GAC · MH325133.1 · 97,376–97,447 bp · +
rrn16 · MH325133.1 · 97,674–99,163 bp · +
trnI-GAU · MH325133.1 · 99,464–100,487 bp · +
trnA-UGC · MH325133.1 · 100,552–101,430 bp · +
rrn23 · MH325133.1 · 101,598–104,407 bp · +
rrn4.5 · MH325133.1 · 104,515–104,617 bp · +
rrn5 · MH325133.1 · 104,847–104,967 bp · +
trnR-ACG · MH325133.1 · 105,211–105,284 bp · +
ycf1 · MH325133.1 · 106,258–107,196 bp · +
rpl32 · MH325133.1 · 110,022–110,198 bp · +
trnL-UAG · MH325133.1 · 110,602–110,681 bp · +
ccsA · MH325133.1 · 110,779–111,750 bp · +
trnN-GUU · MH325133.1 · 125,839–125,911 bp · +
rps7 · MH325133.1 · 136,848–137,315 bp · +
ndhB · MH325133.1 · 137,579–139,790 bp · +
trnL-CAA · MH325133.1 · 140,340–140,420 bp · +
trnI-CAU · MH325133.1 · 147,960–148,033 bp · +
rpl23 · MH325133.1 · 148,199–148,480 bp · +
rpl2 · MH325133.1 · 148,499–150,002 bp · +
rps19 · MH325133.1 · 150,055–150,076 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Teucrium stocksianum subsp. stocksianum
ANNOTATED PLASTOME
MH325133.1
150,076 bp · 135 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37519 75038 112557 150076 bp
Forward strand 5′ → 3′
psbK psbI trnR-UCU trnC-GCA petN trnT-GGU trnM-CAU psbD psbC psbZ trnG-UCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 orf56 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
136 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 78 75 Locate
psbA gene − 306 1364 1059 Locate
trnK-UUU gene − 1656 4198 2543 Locate
matK gene − 1886 3448 1563 Locate
rps16 gene − 5102 6280 1179 Locate
trnQ-UUG gene − 6986 7057 72 Locate
psbK gene + 7394 7585 192 Locate
psbI gene + 7930 8088 159 Locate
trnS-GCU gene − 8202 8289 88 Locate
trnR-UCU gene + 9902 9973 72 Locate
atpA gene − 10085 11608 1524 Locate
atpF gene − 11683 12932 1250 Locate
atpH gene − 13288 13533 246 Locate
atpI gene − 14486 15229 744 Locate
rps2 gene − 15445 16104 660 Locate
rpoC2 gene − 16382 20512 4131 Locate
rpoC1 gene − 20668 23542 2875 Locate
rpoB gene − 23548 26760 3213 Locate
trnC-GCA gene + 27926 28006 81 Locate
petN gene + 28299 28394 96 Locate
psbM gene − 28963 29067 105 Locate
trnD-GUC gene − 29585 29658 74 Locate
trnY-GUA gene − 29767 29850 84 Locate
trnE-UUC gene − 29910 29982 73 Locate
trnT-GGU gene + 30396 30467 72 Locate
trnM-CAU gene + 30402 30460 59 Locate
psbD gene + 31871 32932 1062 Locate
psbC gene + 32880 34301 1422 Locate
trnS-UGA gene − 34560 34651 92 Locate
psbZ gene + 34980 35168 189 Locate
trnG-UCC gene + 35439 35509 71 Locate
trnfM-CAU gene − 35684 35757 74 Locate
rps14 gene − 35893 36195 303 Locate
psaB gene − 36318 38522 2205 Locate
psaA gene − 38548 40800 2253 Locate
ycf3 gene − 41501 43455 1955 Locate
trnS-GGA gene + 43885 43971 87 Locate
rps4 gene − 44281 44880 600 Locate
trnT-UGU gene − 45223 45295 73 Locate
trnL-UAA gene + 46002 46568 567 Locate
trnF-GAA gene + 46879 46951 73 Locate
ndhJ gene − 47606 48082 477 Locate
ndhK gene − 48188 49039 852 Locate
ndhC gene − 48919 49281 363 Locate
trnV-UAC gene − 50081 50733 653 Locate
trnM-CAU gene + 50908 50980 73 Locate
atpE gene − 51174 51575 402 Locate
atpB gene − 51572 53068 1497 Locate
rbcL gene + 53843 55303 1461 Locate
accD gene + 55546 57051 1506 Locate
psaI gene + 57509 57619 111 Locate
ycf4 gene + 58041 58595 555 Locate
cemA gene + 59247 59936 690 Locate
petA gene + 60162 61124 963 Locate
psbJ gene − 61991 62113 123 Locate
psbL gene − 62255 62371 117 Locate
psbF gene − 62395 62514 120 Locate
psbE gene − 62529 62780 252 Locate
petL gene + 63688 63783 96 Locate
petG gene + 63958 64071 114 Locate
trnW-CCA gene − 64194 64267 74 Locate
trnP-UGG gene − 64428 64501 74 Locate
psaJ gene + 64807 64941 135 Locate
rpl33 gene + 65423 65623 201 Locate
rps18 gene + 65785 66090 306 Locate
rpl20 gene − 66327 66713 387 Locate
rps12 gene − 67575 67688 114 Locate
clpP gene − 67816 69761 1946 Locate
psbB gene + 70208 71734 1527 Locate
psbT gene + 71902 72018 117 Locate
psbN gene − 72079 72210 132 Locate
psbH gene + 72298 72528 231 Locate
petB gene + 72650 74002 1353 Locate
petD gene + 74198 75432 1235 Locate
rpoA gene − 75601 76626 1026 Locate
rps11 gene − 76697 77113 417 Locate
rpl36 gene − 77215 77328 114 Locate
infA gene − 77438 77671 234 Locate
rps8 gene − 77802 78251 450 Locate
rpl14 gene − 78380 78748 369 Locate
rpl16 gene − 78875 80118 1244 Locate
rps3 gene − 80268 80912 645 Locate
rpl22 gene − 80897 81364 468 Locate
rps19 gene − 81424 81705 282 Locate
rpl2 gene − 81758 83261 1504 Locate
rpl23 gene − 83280 83561 282 Locate
trnI-CAU gene − 83727 83800 74 Locate
ycf2 gene + 83888 90724 6837 Locate
ycf15 gene + 90824 91072 249 Locate
trnL-CAA gene − 91340 91420 81 Locate
ndhB gene − 91970 94181 2212 Locate
rps7 gene − 94445 94912 468 Locate
rps12 gene − 94966 95762 797 Locate
trnV-GAC gene + 97376 97447 72 Locate
rrn16 gene + 97674 99163 1490 Locate
trnI-GAU gene + 99464 100487 1024 Locate
trnA-UGC gene + 100552 101430 879 Locate
orf56 gene − 101048 101188 141 Locate
rrn23 gene + 101598 104407 2810 Locate
rrn4.5 gene + 104515 104617 103 Locate
rrn5 gene + 104847 104967 121 Locate
trnR-ACG gene + 105211 105284 74 Locate
trnN-GUU gene − 105849 105921 73 Locate
ycf1 gene + 106258 107196 939 Locate
ndhF gene − 107259 109511 2253 Locate
rpl32 gene + 110022 110198 177 Locate
trnL-UAG gene + 110602 110681 80 Locate
ccsA gene + 110779 111750 972 Locate
ndhD gene − 111965 113353 1389 Locate
psaC gene − 113582 113827 246 Locate
ndhE gene − 114078 114383 306 Locate
ndhG gene − 114606 115136 531 Locate
ndhI gene − 115491 115997 507 Locate
ndhA gene − 116078 118148 2071 Locate
ndhH gene − 118150 119331 1182 Locate
rps15 gene − 119428 119745 318 Locate
ycf1 gene − 120073 125502 5430 Locate
trnN-GUU gene + 125839 125911 73 Locate
trnR-ACG gene − 126476 126549 74 Locate
rrn5 gene − 126793 126913 121 Locate
rrn4.5 gene − 127143 127245 103 Locate
rrn23 gene − 127344 130153 2810 Locate
trnA-UGC gene − 130330 131208 879 Locate
trnI-GAU gene − 131273 132296 1024 Locate
rrn16 gene − 132595 134084 1490 Locate
trnV-GAC gene − 134313 134384 72 Locate
rps12 gene + 135998 136794 797 Locate
rps7 gene + 136848 137315 468 Locate
ndhB gene + 137579 139790 2212 Locate
trnL-CAA gene + 140340 140420 81 Locate
ycf15 gene − 140688 140936 249 Locate
ycf2 gene − 141036 147872 6837 Locate
trnI-CAU gene + 147960 148033 74 Locate
rpl23 gene + 148199 148480 282 Locate
rpl2 gene + 148499 150002 1504 Locate
rps19 gene + 150055 150076 22 Locate
Status Available
Accession MH325133.1
Length 150,076 bp
GC content 38.3%
Annotated genes 135
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources