Coordinate-aware organelle record

Thymus linearis chloroplast genome

Available NC_071852.1 151,828 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	408	1467	1059
trnK-UUU	gene	translation-rna	−	1687	4228	2541
matK	gene	other	−	1967	3491	1524
rps16	gene	ribosomal-protein	−	4774	5919	1145
trnQ-UUG	gene	translation-rna	−	6836	6908	72
psbK	gene	photosystem-ii	+	7288	7474	186
psbI	gene	photosystem-ii	+	7854	7965	111
trnS-GCU	gene	translation-rna	−	8115	8203	88
trnG-UCC	gene	translation-rna	+	8920	9672	752
trnR-UCU	gene	translation-rna	+	9852	9924	72
atpA	gene	atp-synthase	−	10030	11554	1524
atpF	gene	atp-synthase	−	11650	12904	1254
atpH	gene	atp-synthase	−	13170	13416	246
atpI	gene	atp-synthase	−	14452	15196	744
rps2	gene	ribosomal-protein	−	15418	16129	711
rpoC2	gene	rna-polymerase	−	16338	20532	4194
rpoC1	gene	rna-polymerase	−	20681	23486	2805
rpoB	gene	rna-polymerase	−	23512	26725	3213
trnC-GCA	gene	translation-rna	+	27854	27925	71
petN	gene	cytochrome	+	28085	28175	90
psbM	gene	photosystem-ii	−	29151	29256	105
trnD-GUC	gene	translation-rna	−	29796	29870	74
trnY-GUA	gene	translation-rna	−	29980	30064	84
trnE-UUC	gene	translation-rna	−	30143	30216	73
trnT-GGU	gene	translation-rna	+	30780	30852	72
psbD	gene	photosystem-ii	+	32192	33254	1062
psbC	gene	photosystem-ii	+	33201	34623	1422
trnS-UGA	gene	translation-rna	−	34876	34969	93
psbZ	gene	photosystem-ii	+	35314	35503	189
trnG-GCC	gene	translation-rna	+	35776	35847	71
trnfM-CAU	gene	translation-rna	−	36010	36084	74
rps14	gene	ribosomal-protein	−	36228	36531	303
psaB	gene	photosystem-i	−	36654	38859	2205
psaA	gene	photosystem-i	−	38884	41137	2253
ycf3	gene	other	−	41902	43831	1929
trnS-GGA	gene	translation-rna	+	44673	44760	87
rps4	gene	ribosomal-protein	−	45047	45653	606
trnT-UGU	gene	translation-rna	−	46046	46119	73
trnL-UAA	gene	translation-rna	+	46800	47354	554
trnF-GAA	gene	translation-rna	+	47646	47719	73
ndhJ	gene	nad-dehydrogenase	−	48351	48828	477
ndhK	gene	nad-dehydrogenase	−	48938	49616	678
ndhC	gene	nad-dehydrogenase	−	49667	50030	363
trnV-UAC	gene	translation-rna	−	50998	51641	643
trnM-CAU	gene	translation-rna	+	51821	51894	73
atpE	gene	atp-synthase	−	52089	52491	402
atpB	gene	atp-synthase	−	52487	53978	1491
rbcL	gene	other	+	54781	56215	1434
accD	gene	other	+	56899	58381	1482
psaI	gene	photosystem-i	+	58844	58955	111
ycf4	gene	other	+	59404	59959	555
cemA	gene	other	+	60603	61293	690
petA	gene	cytochrome	+	61506	62469	963
psbJ	gene	photosystem-ii	−	63463	63586	123
psbL	gene	photosystem-ii	−	63720	63837	117
psbF	gene	photosystem-ii	−	63860	63980	120
psbE	gene	photosystem-ii	−	63994	64246	252
petL	gene	cytochrome	+	65117	65213	96
petG	gene	cytochrome	+	65382	65496	114
trnW-CCA	gene	translation-rna	−	65616	65690	74
trnP-UGG	gene	translation-rna	−	65863	65937	74
psaJ	gene	photosystem-i	+	66216	66351	135
rpl33	gene	ribosomal-protein	+	66798	67002	204
rps18	gene	ribosomal-protein	+	67172	67478	306
rpl20	gene	ribosomal-protein	−	67711	68098	387
rps12	gene	ribosomal-protein	−	68901	96987	28086
rps12	gene	ribosomal-protein	+	68901	138576	69675
clpP	gene	other	−	69139	71046	1907
psbB	gene	photosystem-ii	+	71497	73024	1527
psbT	gene	photosystem-ii	+	73199	73301	102
psbN	gene	photosystem-ii	−	73369	73501	132
psbH	gene	photosystem-ii	+	73606	73828	222
petB	gene	cytochrome	+	73953	75338	1385
petD	gene	cytochrome	+	75525	76706	1181
rpoA	gene	rna-polymerase	−	76888	77896	1008
rps11	gene	ribosomal-protein	−	77967	78384	417
rpl36	gene	ribosomal-protein	−	78493	78607	114
infA	gene	other	−	78670	78904	234
rps8	gene	ribosomal-protein	−	79028	79433	405
rpl14	gene	ribosomal-protein	−	79602	79971	369
rpl16	gene	ribosomal-protein	−	80102	81377	1275
rps3	gene	ribosomal-protein	−	81521	82184	663
rpl22	gene	ribosomal-protein	−	82168	82636	468
rps19	gene	ribosomal-protein	−	82705	82984	279
rpl2	gene	ribosomal-protein	−	83045	84533	1488
rpl23	gene	ribosomal-protein	−	84551	84833	282
trnI-CAU	gene	translation-rna	−	84998	85072	74
ycf2	gene	other	+	85160	91964	6804
ycf15	gene	other	+	92054	92303	249
trnL-CAA	gene	translation-rna	−	92558	92639	81
ndhB	gene	nad-dehydrogenase	−	93199	95407	2208
rps7	gene	ribosomal-protein	−	95672	96140	468
trnV-GAC	gene	translation-rna	+	98623	98695	72
rrn16	gene	ribosomal-rna	+	98921	100412	1491
trnI-GAU	gene	translation-rna	+	100710	101732	1022
trnA-UGC	gene	translation-rna	+	101801	102679	878
rrn23	gene	ribosomal-rna	+	102844	105655	2811
rrn4.5	gene	ribosomal-rna	+	105753	105856	103
rrn5	gene	ribosomal-rna	+	106116	106237	121
trnR-ACG	gene	translation-rna	+	106475	106554	79
trnN-GUU	gene	translation-rna	−	107079	107151	72
ycf1	gene	other	+	107480	108611	1131
ndhF	gene	nad-dehydrogenase	−	108504	110736	2232
rpl32	gene	ribosomal-protein	+	111214	111385	171
trnL-UAG	gene	translation-rna	+	112110	112190	80
ccsA	gene	other	+	112293	113271	978
ndhD	gene	nad-dehydrogenase	−	113518	114907	1389
psaC	gene	photosystem-i	−	115142	115388	246
ndhE	gene	nad-dehydrogenase	−	115622	115928	306
ndhG	gene	nad-dehydrogenase	−	116151	116682	531
ndhI	gene	nad-dehydrogenase	−	117066	117573	507
ndhA	gene	nad-dehydrogenase	−	117656	119746	2090
ndhH	gene	nad-dehydrogenase	−	119747	120929	1182
rps15	gene	ribosomal-protein	−	121028	121301	273
ycf1	gene	other	−	121745	127289	5544
trnN-GUU	gene	translation-rna	+	127618	127690	72
trnR-ACG	gene	translation-rna	−	128215	128294	79
rrn5	gene	ribosomal-rna	−	128532	128653	121
rrn4.5	gene	ribosomal-rna	−	128913	129016	103
rrn23	gene	ribosomal-rna	−	129114	131925	2811
trnA-UGC	gene	translation-rna	−	132090	132968	878
trnI-GAU	gene	translation-rna	−	133037	134059	1022
rrn16	gene	ribosomal-rna	−	134357	135848	1491
trnV-GAC	gene	translation-rna	−	136074	136146	72
rps7	gene	ribosomal-protein	+	138629	139097	468
ndhB	gene	nad-dehydrogenase	+	139362	141570	2208
trnL-CAA	gene	translation-rna	+	142130	142211	81
ycf15	gene	other	−	142466	142715	249
ycf2	gene	other	−	142805	149609	6804
trnI-CAU	gene	translation-rna	+	149697	149771	74
rpl23	gene	ribosomal-protein	+	149936	150218	282
rpl2	gene	ribosomal-protein	+	150236	151724	1488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_071852.1DNA · accDNC_071852DNA · atpBNC_071852DNA · matKNC_071852DNA · ndhFNC_071852DNA · psbANC_071852DNA · rbcLNC_071852DNA · rps12NC_071852DNA · ycf1NC_071852