Coordinate-aware organelle record

Thymus mongolicus chloroplast genome

Available NC_046520.1 151,834 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	406	1465	1059
trnK-UUU	gene	translation-rna	−	1685	4286	2601
matK	gene	other	−	2025	3549	1524
rps16	gene	ribosomal-protein	−	4832	5977	1145
trnQ-UUG	gene	translation-rna	−	6894	6966	72
psbK	gene	photosystem-ii	+	7346	7532	186
psbI	gene	photosystem-ii	+	7913	8024	111
trnS-GCU	gene	translation-rna	−	8174	8262	88
trnG-UCC	gene	translation-rna	+	8979	9730	751
trnR-UCU	gene	translation-rna	+	9911	9983	72
atpA	gene	atp-synthase	−	10089	11613	1524
atpF	gene	atp-synthase	−	11708	12957	1249
atpH	gene	atp-synthase	−	13223	13469	246
atpI	gene	atp-synthase	−	14505	15249	744
rps2	gene	ribosomal-protein	−	15471	16182	711
rpoC2	gene	rna-polymerase	−	16391	20585	4194
rpoC1	gene	rna-polymerase	−	20734	23539	2805
rpoB	gene	rna-polymerase	−	23565	26778	3213
trnC-GCA	gene	translation-rna	+	27907	27978	71
petN	gene	cytochrome	+	28138	28228	90
psbM	gene	photosystem-ii	−	29204	29309	105
trnD-GUC	gene	translation-rna	−	29826	29900	74
trnY-GUA	gene	translation-rna	−	30010	30094	84
trnE-UUC	gene	translation-rna	−	30173	30246	73
trnT-GGU	gene	translation-rna	+	30810	30882	72
psbD	gene	photosystem-ii	+	32222	33284	1062
psbC	gene	photosystem-ii	+	33231	34653	1422
trnS-UGA	gene	translation-rna	−	34900	34993	93
psbZ	gene	photosystem-ii	+	35338	35527	189
trnG-GCC	gene	translation-rna	+	35798	35869	71
trnfM-CAU	gene	translation-rna	−	36031	36105	74
rps14	gene	ribosomal-protein	−	36249	36552	303
psaB	gene	photosystem-i	−	36675	38880	2205
psaA	gene	photosystem-i	−	38905	41158	2253
ycf3	gene	other	−	41923	43852	1929
trnS-GGA	gene	translation-rna	+	44694	44781	87
rps4	gene	ribosomal-protein	−	45068	45674	606
trnT-UGU	gene	translation-rna	−	46067	46140	73
trnL-UAA	gene	translation-rna	+	46814	47368	554
trnF-GAA	gene	translation-rna	+	47661	47734	73
ndhJ	gene	nad-dehydrogenase	−	48365	48842	477
ndhK	gene	nad-dehydrogenase	−	48952	49630	678
ndhC	gene	nad-dehydrogenase	−	49681	50044	363
trnV-UAC	gene	translation-rna	−	51012	51655	643
trnM-CAU	gene	translation-rna	+	51835	51908	73
atpE	gene	atp-synthase	−	52103	52505	402
atpB	gene	atp-synthase	−	52501	54076	1575
rbcL	gene	other	+	54795	56229	1434
accD	gene	other	+	56913	58395	1482
psaI	gene	photosystem-i	+	58858	58969	111
ycf4	gene	other	+	59417	59972	555
cemA	gene	other	+	60616	61306	690
petA	gene	cytochrome	+	61519	62482	963
psbJ	gene	photosystem-ii	−	63476	63599	123
psbL	gene	photosystem-ii	−	63733	63850	117
psbF	gene	photosystem-ii	−	63873	63993	120
psbE	gene	photosystem-ii	−	64007	64259	252
petL	gene	cytochrome	+	65130	65226	96
petG	gene	cytochrome	+	65395	65509	114
trnW-CCA	gene	translation-rna	−	65629	65703	74
trnP-UGG	gene	translation-rna	−	65876	65950	74
psaJ	gene	photosystem-i	+	66229	66364	135
rpl33	gene	ribosomal-protein	+	66811	67015	204
rps18	gene	ribosomal-protein	+	67185	67491	306
rpl20	gene	ribosomal-protein	−	67724	68111	387
rps12	gene	ribosomal-protein	−	68914	97002	28088
rps12	gene	ribosomal-protein	+	68914	138582	69668
clpP	gene	other	−	69152	71059	1907
psbB	gene	photosystem-ii	+	71510	73037	1527
psbT	gene	photosystem-ii	+	73212	73314	102
psbN	gene	photosystem-ii	−	73382	73514	132
psbH	gene	photosystem-ii	+	73619	73841	222
petB	gene	cytochrome	+	73966	75350	1384
petD	gene	cytochrome	+	75537	76718	1181
rpoA	gene	rna-polymerase	−	76900	77908	1008
rps11	gene	ribosomal-protein	−	77979	78396	417
rpl36	gene	ribosomal-protein	−	78505	78619	114
infA	gene	other	−	78682	78916	234
rps8	gene	ribosomal-protein	−	79041	79446	405
rpl14	gene	ribosomal-protein	−	79617	79986	369
rpl16	gene	ribosomal-protein	−	80117	81392	1275
rps3	gene	ribosomal-protein	−	81536	82199	663
rpl22	gene	ribosomal-protein	−	82183	82651	468
rps19	gene	ribosomal-protein	−	82720	82870	150
rpl2	gene	ribosomal-protein	−	83060	84548	1488
rpl23	gene	ribosomal-protein	−	84566	84848	282
trnI-CAU	gene	translation-rna	−	85013	85087	74
ycf2	gene	other	+	85175	91979	6804
ycf15	gene	other	+	92054	92318	264
trnL-CAA	gene	translation-rna	−	92573	92654	81
ndhB	gene	nad-dehydrogenase	−	93214	95422	2208
rps7	gene	ribosomal-protein	−	95687	96155	468
trnV-GAC	gene	translation-rna	+	98638	98710	72
rrn16	gene	ribosomal-rna	+	98936	100427	1491
trnI-GAU	gene	translation-rna	+	100725	101747	1022
trnA-UGC	gene	translation-rna	+	101816	102694	878
rrn23	gene	ribosomal-rna	+	102859	105670	2811
rrn4.5	gene	ribosomal-rna	+	105768	105871	103
rrn5	gene	ribosomal-rna	+	106131	106252	121
trnR-ACG	gene	translation-rna	+	106495	106569	74
trnN-GUU	gene	translation-rna	−	107093	107165	72
ycf1	gene	other	+	107494	108563	1069
ndhF	gene	nad-dehydrogenase	−	108518	110750	2232
rpl32	gene	ribosomal-protein	+	111227	111398	171
trnL-UAG	gene	translation-rna	+	112124	112204	80
ccsA	gene	other	+	112307	113285	978
ndhD	gene	nad-dehydrogenase	−	113531	115061	1530
psaC	gene	photosystem-i	−	115155	115401	246
ndhE	gene	nad-dehydrogenase	−	115635	115941	306
ndhG	gene	nad-dehydrogenase	−	116164	116695	531
ndhI	gene	nad-dehydrogenase	−	117079	117586	507
ndhA	gene	nad-dehydrogenase	−	117669	119759	2090
ndhH	gene	nad-dehydrogenase	−	119760	120942	1182
rps15	gene	ribosomal-protein	−	121041	121314	273
ycf1	gene	other	−	121752	127296	5544
trnN-GUU	gene	translation-rna	+	127625	127697	72
trnR-ACG	gene	translation-rna	−	128221	128295	74
rrn5	gene	ribosomal-rna	−	128538	128659	121
rrn4.5	gene	ribosomal-rna	−	128919	129022	103
rrn23	gene	ribosomal-rna	−	129120	131931	2811
trnA-UGC	gene	translation-rna	−	132096	132974	878
trnI-GAU	gene	translation-rna	−	133043	134065	1022
rrn16	gene	ribosomal-rna	−	134363	135854	1491
trnV-GAC	gene	translation-rna	−	136080	136152	72
rps7	gene	ribosomal-protein	+	138635	139103	468
ndhB	gene	nad-dehydrogenase	+	139368	141576	2208
trnL-CAA	gene	translation-rna	+	142136	142217	81
ycf15	gene	other	−	142472	142736	264
ycf2	gene	other	−	142811	149615	6804
trnI-CAU	gene	translation-rna	+	149703	149777	74
rpl23	gene	ribosomal-protein	+	149942	150224	282
rpl2	gene	ribosomal-protein	+	150242	151730	1488
rps19	gene	ribosomal-protein	+	151791	151834	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_046520.1DNA · accDNC_046520DNA · atpBNC_046520DNA · matKNC_046520DNA · ndhFNC_046520DNA · psbANC_046520DNA · rbcLNC_046520DNA · rps12NC_046520DNA · ycf1NC_046520