Coordinate-aware organelle record

Thymus praecox subsp. polytrichus chloroplast genome

Available PP272181.1 151,747 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	406	1465	1059
trnK-UUU	gene	translation-rna	−	1685	4226	2541
matK	gene	other	−	1965	3489	1524
rps16	gene	ribosomal-protein	−	4772	5917	1145
trnQ-UUG	gene	translation-rna	−	6830	6902	72
psbK	gene	photosystem-ii	+	7282	7468	186
psbI	gene	photosystem-ii	+	7855	7966	111
trnS-GCU	gene	translation-rna	−	8117	8205	88
trnG-UCC	gene	translation-rna	+	8921	9673	752
trnR-UCU	gene	translation-rna	+	9853	9925	72
atpA	gene	atp-synthase	−	10031	11555	1524
atpF	gene	atp-synthase	−	11649	12899	1250
atpH	gene	atp-synthase	−	13165	13411	246
atpI	gene	atp-synthase	−	14447	15191	744
rps2	gene	ribosomal-protein	−	15413	16124	711
rpoC2	gene	rna-polymerase	−	16331	20525	4194
rpoC1	gene	rna-polymerase	−	20674	23479	2805
rpoB	gene	rna-polymerase	−	23505	26718	3213
trnC-GCA	gene	translation-rna	+	27847	27918	71
petN	gene	cytochrome	+	28078	28168	90
psbM	gene	photosystem-ii	−	29145	29250	105
trnD-GUC	gene	translation-rna	−	29761	29835	74
trnY-GUA	gene	translation-rna	−	29945	30029	84
trnE-UUC	gene	translation-rna	−	30108	30181	73
trnT-GGU	gene	translation-rna	+	30741	30813	72
psbD	gene	photosystem-ii	+	32153	33215	1062
psbC	gene	photosystem-ii	+	33162	34584	1422
trnS-UGA	gene	translation-rna	−	34828	34921	93
psbZ	gene	photosystem-ii	+	35267	35456	189
trnG-GCC	gene	translation-rna	+	35727	35798	71
trnfM-CAU	gene	translation-rna	−	35962	36036	74
rps14	gene	ribosomal-protein	−	36180	36483	303
psaB	gene	photosystem-i	−	36606	38811	2205
psaA	gene	photosystem-i	−	38836	41089	2253
ycf3	gene	other	−	41854	43782	1928
trnS-GGA	gene	translation-rna	+	44619	44706	87
rps4	gene	ribosomal-protein	−	44993	45599	606
trnT-UGU	gene	translation-rna	−	45997	46070	73
trnL-UAA	gene	translation-rna	+	46738	47293	555
trnF-GAA	gene	translation-rna	+	47585	47658	73
ndhJ	gene	nad-dehydrogenase	−	48291	48768	477
ndhK	gene	nad-dehydrogenase	−	48878	49556	678
ndhC	gene	nad-dehydrogenase	−	49607	49970	363
trnV-UAC	gene	translation-rna	−	50938	51581	643
trnM-CAU	gene	translation-rna	+	51761	51834	73
atpE	gene	atp-synthase	−	52029	52431	402
atpB	gene	atp-synthase	−	52427	53918	1491
rbcL	gene	other	+	54721	56155	1434
accD	gene	other	+	56839	58321	1482
psaI	gene	photosystem-i	+	58790	58901	111
ycf4	gene	other	+	59349	59904	555
cemA	gene	other	+	60550	61240	690
petA	gene	cytochrome	+	61453	62416	963
psbJ	gene	photosystem-ii	−	63411	63534	123
psbL	gene	photosystem-ii	−	63668	63785	117
psbF	gene	photosystem-ii	−	63808	63928	120
psbE	gene	photosystem-ii	−	63942	64194	252
petL	gene	cytochrome	+	65065	65161	96
petG	gene	cytochrome	+	65330	65444	114
trnW-CCA	gene	translation-rna	−	65564	65638	74
trnP-UGG	gene	translation-rna	−	65811	65885	74
psaJ	gene	photosystem-i	+	66164	66299	135
rpl33	gene	ribosomal-protein	+	66746	66950	204
rps18	gene	ribosomal-protein	+	67120	67426	306
rpl20	gene	ribosomal-protein	−	67658	68045	387
rps12	gene	ribosomal-protein	−	68848	96928	28080
rps12	gene	ribosomal-protein	+	68848	138496	69648
clpP	gene	other	−	69086	70993	1907
psbB	gene	photosystem-ii	+	71444	72971	1527
psbT	gene	photosystem-ii	+	73146	73248	102
psbN	gene	photosystem-ii	−	73316	73448	132
psbH	gene	photosystem-ii	+	73553	73775	222
petB	gene	cytochrome	+	73900	75284	1384
petD	gene	cytochrome	+	75471	76652	1181
rpoA	gene	rna-polymerase	−	76834	77842	1008
rps11	gene	ribosomal-protein	−	77913	78330	417
rpl36	gene	ribosomal-protein	−	78439	78553	114
infA	gene	other	−	78616	78850	234
rps8	gene	ribosomal-protein	−	78973	79378	405
rpl14	gene	ribosomal-protein	−	79544	79913	369
rpl16	gene	ribosomal-protein	−	80044	81319	1275
rps3	gene	ribosomal-protein	−	81463	82126	663
rpl22	gene	ribosomal-protein	−	82110	82578	468
rps19	gene	ribosomal-protein	−	82647	82926	279
rpl2	gene	ribosomal-protein	−	82986	84474	1488
rpl23	gene	ribosomal-protein	−	84492	84774	282
trnI-CAU	gene	translation-rna	−	84939	85013	74
ycf2	gene	other	+	85101	91905	6804
ycf15	gene	other	+	92046	92244	198
trnL-CAA	gene	translation-rna	−	92499	92580	81
ndhB	gene	nad-dehydrogenase	−	93140	95348	2208
rps7	gene	ribosomal-protein	−	95613	96081	468
trnV-GAC	gene	translation-rna	+	98570	98642	72
rrn16	gene	ribosomal-rna	+	98868	100359	1491
trnI-GAU	gene	translation-rna	+	100657	101679	1022
trnA-UGC	gene	translation-rna	+	101748	102626	878
rrn23	gene	ribosomal-rna	+	102791	105602	2811
rrn4.5	gene	ribosomal-rna	+	105700	105803	103
rrn5	gene	ribosomal-rna	+	106063	106184	121
trnR-ACG	gene	translation-rna	+	106422	106501	79
trnN-GUU	gene	translation-rna	−	107026	107098	72
ycf1	gene	other	+	107427	108558	1131
ndhF	gene	nad-dehydrogenase	−	108451	110683	2232
rpl32	gene	ribosomal-protein	+	111162	111333	171
trnL-UAG	gene	translation-rna	+	112061	112141	80
ccsA	gene	other	+	112243	113221	978
ndhD	gene	nad-dehydrogenase	−	113467	114856	1389
psaC	gene	photosystem-i	−	115090	115336	246
ndhE	gene	nad-dehydrogenase	−	115570	115876	306
ndhG	gene	nad-dehydrogenase	−	116099	116630	531
ndhI	gene	nad-dehydrogenase	−	117012	117519	507
ndhA	gene	nad-dehydrogenase	−	117594	119684	2090
ndhH	gene	nad-dehydrogenase	−	119685	120867	1182
rps15	gene	ribosomal-protein	−	120966	121239	273
ycf1	gene	other	−	121659	127203	5544
trnN-GUU	gene	translation-rna	+	127532	127604	72
trnR-ACG	gene	translation-rna	−	128129	128208	79
rrn5	gene	ribosomal-rna	−	128446	128567	121
rrn4.5	gene	ribosomal-rna	−	128827	128930	103
rrn23	gene	ribosomal-rna	−	129028	131839	2811
trnA-UGC	gene	translation-rna	−	132004	132882	878
trnI-GAU	gene	translation-rna	−	132951	133973	1022
rrn16	gene	ribosomal-rna	−	134271	135762	1491
trnV-GAC	gene	translation-rna	−	135988	136060	72
rps7	gene	ribosomal-protein	+	138549	139017	468
ndhB	gene	nad-dehydrogenase	+	139282	141490	2208
trnL-CAA	gene	translation-rna	+	142050	142131	81
ycf15	gene	other	−	142386	142584	198
ycf2	gene	other	−	142725	149529	6804
trnI-CAU	gene	translation-rna	+	149617	149691	74
rpl23	gene	ribosomal-protein	+	149856	150138	282
rpl2	gene	ribosomal-protein	+	150156	151644	1488
rps19	gene	ribosomal-protein	+	151704	151747	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP272181.1DNA · accDPP272181DNA · atpBPP272181DNA · matKPP272181DNA · ndhFPP272181DNA · psbAPP272181DNA · rbcLPP272181DNA · rps12PP272181DNA · ycf1PP272181