Coordinate-aware organelle record

Thymus praecox subsp. praecox chloroplast genome

Available PP272182.1 151,763 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	406	1465	1059
trnK-UUU	gene	translation-rna	−	1685	4226	2541
matK	gene	other	−	1965	3489	1524
rps16	gene	ribosomal-protein	−	4772	5917	1145
trnQ-UUG	gene	translation-rna	−	6832	6904	72
psbK	gene	photosystem-ii	+	7284	7470	186
psbI	gene	photosystem-ii	+	7858	7969	111
trnS-GCU	gene	translation-rna	−	8120	8208	88
trnG-UCC	gene	translation-rna	+	8924	9676	752
trnR-UCU	gene	translation-rna	+	9856	9928	72
atpA	gene	atp-synthase	−	10034	11558	1524
atpF	gene	atp-synthase	−	11652	12900	1248
atpH	gene	atp-synthase	−	13166	13412	246
atpI	gene	atp-synthase	−	14449	15193	744
rps2	gene	ribosomal-protein	−	15415	16126	711
rpoC2	gene	rna-polymerase	−	16334	20528	4194
rpoC1	gene	rna-polymerase	−	20677	23482	2805
rpoB	gene	rna-polymerase	−	23508	26721	3213
trnC-GCA	gene	translation-rna	+	27850	27921	71
petN	gene	cytochrome	+	28081	28171	90
psbM	gene	photosystem-ii	−	29147	29252	105
trnD-GUC	gene	translation-rna	−	29769	29843	74
trnY-GUA	gene	translation-rna	−	29953	30037	84
trnE-UUC	gene	translation-rna	−	30116	30189	73
trnT-GGU	gene	translation-rna	+	30751	30823	72
psbD	gene	photosystem-ii	+	32163	33225	1062
psbC	gene	photosystem-ii	+	33172	34594	1422
trnS-UGA	gene	translation-rna	−	34841	34934	93
psbZ	gene	photosystem-ii	+	35279	35468	189
trnG-GCC	gene	translation-rna	+	35739	35810	71
trnfM-CAU	gene	translation-rna	−	35972	36046	74
rps14	gene	ribosomal-protein	−	36190	36493	303
psaB	gene	photosystem-i	−	36616	38821	2205
psaA	gene	photosystem-i	−	38846	41099	2253
ycf3	gene	other	−	41869	43798	1929
trnS-GGA	gene	translation-rna	+	44640	44727	87
rps4	gene	ribosomal-protein	−	45014	45620	606
trnT-UGU	gene	translation-rna	−	46014	46087	73
trnL-UAA	gene	translation-rna	+	46769	47323	554
trnF-GAA	gene	translation-rna	+	47615	47688	73
ndhJ	gene	nad-dehydrogenase	−	48320	48797	477
ndhK	gene	nad-dehydrogenase	−	48907	49585	678
ndhC	gene	nad-dehydrogenase	−	49636	49999	363
trnV-UAC	gene	translation-rna	−	50967	51610	643
trnM-CAU	gene	translation-rna	+	51790	51863	73
atpE	gene	atp-synthase	−	52058	52460	402
atpB	gene	atp-synthase	−	52456	53947	1491
rbcL	gene	other	+	54750	56184	1434
accD	gene	other	+	56855	58337	1482
psaI	gene	photosystem-i	+	58800	58911	111
ycf4	gene	other	+	59361	59916	555
cemA	gene	other	+	60563	61253	690
petA	gene	cytochrome	+	61466	62429	963
psbJ	gene	photosystem-ii	−	63423	63546	123
psbL	gene	photosystem-ii	−	63680	63797	117
psbF	gene	photosystem-ii	−	63820	63940	120
psbE	gene	photosystem-ii	−	63954	64206	252
petL	gene	cytochrome	+	65077	65173	96
petG	gene	cytochrome	+	65342	65456	114
trnW-CCA	gene	translation-rna	−	65576	65650	74
trnP-UGG	gene	translation-rna	−	65823	65897	74
psaJ	gene	photosystem-i	+	66176	66311	135
rpl33	gene	ribosomal-protein	+	66758	66962	204
rps18	gene	ribosomal-protein	+	67132	67438	306
rpl20	gene	ribosomal-protein	−	67671	68058	387
rps12	gene	ribosomal-protein	−	68861	96937	28076
rps12	gene	ribosomal-protein	+	68861	138530	69669
clpP	gene	other	−	69099	71007	1908
psbB	gene	photosystem-ii	+	71458	72985	1527
psbT	gene	photosystem-ii	+	73160	73262	102
psbN	gene	photosystem-ii	−	73330	73462	132
psbH	gene	photosystem-ii	+	73567	73789	222
petB	gene	cytochrome	+	73914	75298	1384
petD	gene	cytochrome	+	75485	76666	1181
rpoA	gene	rna-polymerase	−	76848	77856	1008
rps11	gene	ribosomal-protein	−	77927	78344	417
rpl36	gene	ribosomal-protein	−	78453	78567	114
infA	gene	other	−	78630	78864	234
rps8	gene	ribosomal-protein	−	78988	79393	405
rpl14	gene	ribosomal-protein	−	79564	79933	369
rpl16	gene	ribosomal-protein	−	80064	81339	1275
rps3	gene	ribosomal-protein	−	81490	82153	663
rpl22	gene	ribosomal-protein	−	82137	82605	468
rps19	gene	ribosomal-protein	−	82674	82953	279
rpl2	gene	ribosomal-protein	−	83013	84501	1488
rpl23	gene	ribosomal-protein	−	84519	84801	282
trnI-CAU	gene	translation-rna	−	84966	85040	74
ycf2	gene	other	+	85128	91914	6786
ycf15	gene	other	+	92055	92253	198
trnL-CAA	gene	translation-rna	−	92508	92589	81
ndhB	gene	nad-dehydrogenase	−	93149	95357	2208
rps7	gene	ribosomal-protein	−	95622	96090	468
trnV-GAC	gene	translation-rna	+	98573	98645	72
rrn16	gene	ribosomal-rna	+	98871	100362	1491
trnI-GAU	gene	translation-rna	+	100660	101682	1022
trnA-UGC	gene	translation-rna	+	101751	102629	878
rrn23	gene	ribosomal-rna	+	102794	105605	2811
rrn4.5	gene	ribosomal-rna	+	105703	105806	103
rrn5	gene	ribosomal-rna	+	106066	106187	121
trnR-ACG	gene	translation-rna	+	106425	106504	79
trnN-GUU	gene	translation-rna	−	107029	107101	72
ycf1	gene	other	+	107430	108561	1131
ndhF	gene	nad-dehydrogenase	−	108454	110686	2232
rpl32	gene	ribosomal-protein	+	111164	111335	171
trnL-UAG	gene	translation-rna	+	112063	112143	80
ccsA	gene	other	+	112246	113224	978
ndhD	gene	nad-dehydrogenase	−	113472	114861	1389
psaC	gene	photosystem-i	−	115096	115342	246
ndhE	gene	nad-dehydrogenase	−	115576	115882	306
ndhG	gene	nad-dehydrogenase	−	116105	116636	531
ndhI	gene	nad-dehydrogenase	−	117020	117527	507
ndhA	gene	nad-dehydrogenase	−	117610	119700	2090
ndhH	gene	nad-dehydrogenase	−	119701	120883	1182
rps15	gene	ribosomal-protein	−	120982	121255	273
ycf1	gene	other	−	121699	127243	5544
trnN-GUU	gene	translation-rna	+	127572	127644	72
trnR-ACG	gene	translation-rna	−	128169	128248	79
rrn5	gene	ribosomal-rna	−	128486	128607	121
rrn4.5	gene	ribosomal-rna	−	128867	128970	103
rrn23	gene	ribosomal-rna	−	129068	131879	2811
trnA-UGC	gene	translation-rna	−	132044	132922	878
trnI-GAU	gene	translation-rna	−	132991	134013	1022
rrn16	gene	ribosomal-rna	−	134311	135802	1491
trnV-GAC	gene	translation-rna	−	136028	136100	72
rps7	gene	ribosomal-protein	+	138583	139051	468
ndhB	gene	nad-dehydrogenase	+	139316	141524	2208
trnL-CAA	gene	translation-rna	+	142084	142165	81
ycf15	gene	other	−	142420	142618	198
ycf2	gene	other	−	142759	149545	6786
trnI-CAU	gene	translation-rna	+	149633	149707	74
rpl23	gene	ribosomal-protein	+	149872	150154	282
rpl2	gene	ribosomal-protein	+	150172	151660	1488
rps19	gene	ribosomal-protein	+	151720	151763	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP272182.1DNA · accDPP272182DNA · atpBPP272182DNA · matKPP272182DNA · ndhFPP272182DNA · psbAPP272182DNA · rbcLPP272182DNA · rps12PP272182DNA · ycf1PP272182