Thymus subnervosus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PZ130073.1 · 11–84 bp · −
psbA · PZ130073.1 · 407–1,465 bp · −
trnK-UUU · PZ130073.1 · 1,686–4,226 bp · −
matK · PZ130073.1 · 1,966–3,489 bp · −
rps16 · PZ130073.1 · 4,773–5,917 bp · −
trnQ-UUG · PZ130073.1 · 6,831–6,902 bp · −
trnS-GCU · PZ130073.1 · 8,113–8,200 bp · −
atpA · PZ130073.1 · 10,035–11,558 bp · −
atpF · PZ130073.1 · 11,654–12,901 bp · −
atpH · PZ130073.1 · 13,168–13,413 bp · −
atpI · PZ130073.1 · 14,450–15,193 bp · −
rps2 · PZ130073.1 · 15,416–16,126 bp · −
rpoC2 · PZ130073.1 · 16,333–20,526 bp · −
rpoC1 · PZ130073.1 · 20,676–23,480 bp · −
rpoB · PZ130073.1 · 23,507–26,719 bp · −
psbM · PZ130073.1 · 29,146–29,250 bp · −
trnD-GUC · PZ130073.1 · 29,768–29,841 bp · −
trnY-GUA · PZ130073.1 · 29,952–30,035 bp · −
trnE-UUC · PZ130073.1 · 30,115–30,187 bp · −
trnS-UGA · PZ130073.1 · 34,842–34,934 bp · −
trnfM-CAU · PZ130073.1 · 35,973–36,046 bp · −
rps14 · PZ130073.1 · 36,191–36,493 bp · −
psaB · PZ130073.1 · 36,617–38,821 bp · −
psaA · PZ130073.1 · 38,847–41,099 bp · −
ycf3 · PZ130073.1 · 41,865–43,793 bp · −
rps4 · PZ130073.1 · 45,010–45,615 bp · −
trnT-UGU · PZ130073.1 · 46,009–46,081 bp · −
ndhJ · PZ130073.1 · 48,309–48,785 bp · −
ndhK · PZ130073.1 · 48,896–49,573 bp · −
ndhC · PZ130073.1 · 49,625–49,987 bp · −
trnV-UAC · PZ130073.1 · 50,956–51,598 bp · −
atpE · PZ130073.1 · 52,047–52,448 bp · −
atpB · PZ130073.1 · 52,445–53,935 bp · −
psbJ · PZ130073.1 · 63,414–63,536 bp · −
psbL · PZ130073.1 · 63,671–63,787 bp · −
psbF · PZ130073.1 · 63,811–63,930 bp · −
psbE · PZ130073.1 · 63,945–64,196 bp · −
trnW-CCA · PZ130073.1 · 65,567–65,640 bp · −
trnP-UGG · PZ130073.1 · 65,814–65,887 bp · −
rpl20 · PZ130073.1 · 67,662–68,048 bp · −
rps12 · PZ130073.1 · 68,852–68,965 bp · −
rps12 · PZ130073.1 · 96,146–96,939 bp · −
clpP · PZ130073.1 · 69,090–70,996 bp · −
psbN · PZ130073.1 · 73,320–73,451 bp · −
rpoA · PZ130073.1 · 76,840–77,847 bp · −
rps11 · PZ130073.1 · 77,919–78,335 bp · −
rpl36 · PZ130073.1 · 78,445–78,558 bp · −
infA · PZ130073.1 · 78,622–78,855 bp · −
rps8 · PZ130073.1 · 78,981–79,385 bp · −
rpl14 · PZ130073.1 · 79,555–79,923 bp · −
rpl16 · PZ130073.1 · 80,055–81,329 bp · −
rps3 · PZ130073.1 · 81,474–82,136 bp · −
rpl22 · PZ130073.1 · 82,121–82,588 bp · −
rps19 · PZ130073.1 · 82,658–82,936 bp · −
rpl2 · PZ130073.1 · 82,998–84,485 bp · −
rpl23 · PZ130073.1 · 84,504–84,785 bp · −
trnI-CAU · PZ130073.1 · 84,951–85,024 bp · −
trnL-CAA · PZ130073.1 · 92,511–92,591 bp · −
ndhB · PZ130073.1 · 93,152–95,359 bp · −
rps7 · PZ130073.1 · 95,625–96,092 bp · −
trnN-GUU · PZ130073.1 · 107,031–107,102 bp · −
ndhF · PZ130073.1 · 108,456–110,687 bp · −
ndhD · PZ130073.1 · 113,470–114,858 bp · −
psaC · PZ130073.1 · 115,094–115,339 bp · −
ndhE · PZ130073.1 · 115,574–115,879 bp · −
ndhG · PZ130073.1 · 116,103–116,633 bp · −
ndhI · PZ130073.1 · 117,018–117,524 bp · −
ndhA · PZ130073.1 · 117,608–119,697 bp · −
ndhH · PZ130073.1 · 119,699–120,880 bp · −
rps15 · PZ130073.1 · 120,980–121,252 bp · −
ycf1 · PZ130073.1 · 121,703–127,246 bp · −
trnR-ACG · PZ130073.1 · 128,173–128,251 bp · −
rrn5 · PZ130073.1 · 128,490–128,610 bp · −
rrn4.5 · PZ130073.1 · 128,871–128,973 bp · −
rrn23 · PZ130073.1 · 129,072–131,882 bp · −
trnA-UGC · PZ130073.1 · 132,048–132,925 bp · −
trnI-GAU · PZ130073.1 · 132,995–134,015 bp · −
rrn16 · PZ130073.1 · 134,314–135,804 bp · −
trnV-GAC · PZ130073.1 · 136,031–136,102 bp · −
ycf15 · PZ130073.1 · 142,423–142,620 bp · −
ycf2 · PZ130073.1 · 142,762–149,565 bp · −
psbK · PZ130073.1 · 7,283–7,468 bp · +
psbI · PZ130073.1 · 7,851–7,961 bp · +
trnG-UCC · PZ130073.1 · 8,925–9,676 bp · +
trnR-UCU · PZ130073.1 · 9,857–9,928 bp · +
trnC-GCA · PZ130073.1 · 27,849–27,919 bp · +
petN · PZ130073.1 · 28,080–28,169 bp · +
trnT-GGU · PZ130073.1 · 30,752–30,823 bp · +
psbD · PZ130073.1 · 32,164–33,225 bp · +
psbC · PZ130073.1 · 33,173–34,594 bp · +
psbZ · PZ130073.1 · 35,280–35,468 bp · +
trnG-GCC · PZ130073.1 · 35,740–35,810 bp · +
trnS-GGA · PZ130073.1 · 44,636–44,722 bp · +
trnL-UAA · PZ130073.1 · 46,758–47,311 bp · +
trnF-GAA · PZ130073.1 · 47,604–47,676 bp · +
trnM-CAU · PZ130073.1 · 51,779–51,851 bp · +
rbcL · PZ130073.1 · 54,739–56,172 bp · +
accD · PZ130073.1 · 56,857–58,338 bp · +
psaI · PZ130073.1 · 58,802–58,912 bp · +
ycf4 · PZ130073.1 · 59,361–59,915 bp · +
cemA · PZ130073.1 · 60,557–61,246 bp · +
petA · PZ130073.1 · 61,456–62,418 bp · +
petL · PZ130073.1 · 65,068–65,163 bp · +
petG · PZ130073.1 · 65,333–65,446 bp · +
psaJ · PZ130073.1 · 66,167–66,301 bp · +
rpl33 · PZ130073.1 · 66,749–66,952 bp · +
rps18 · PZ130073.1 · 67,123–67,428 bp · +
rps12 · PZ130073.1 · 137,739–138,532 bp · +
psbB · PZ130073.1 · 71,448–72,974 bp · +
psbT · PZ130073.1 · 73,150–73,251 bp · +
psbH · PZ130073.1 · 73,557–73,778 bp · +
petB · PZ130073.1 · 73,904–75,287 bp · +
petD · PZ130073.1 · 75,475–76,657 bp · +
ycf2 · PZ130073.1 · 85,113–91,916 bp · +
ycf15 · PZ130073.1 · 92,058–92,255 bp · +
trnV-GAC · PZ130073.1 · 98,576–98,647 bp · +
rrn16 · PZ130073.1 · 98,874–100,364 bp · +
trnI-GAU · PZ130073.1 · 100,663–101,683 bp · +
trnA-UGC · PZ130073.1 · 101,753–102,630 bp · +
rrn23 · PZ130073.1 · 102,796–105,606 bp · +
rrn4.5 · PZ130073.1 · 105,705–105,807 bp · +
rrn5 · PZ130073.1 · 106,068–106,188 bp · +
trnR-ACG · PZ130073.1 · 106,427–106,505 bp · +
ycf1 · PZ130073.1 · 107,432–108,562 bp · +
rpl32 · PZ130073.1 · 111,165–111,335 bp · +
trnL-UAG · PZ130073.1 · 112,063–112,142 bp · +
ccsA · PZ130073.1 · 112,246–113,223 bp · +
trnN-GUU · PZ130073.1 · 127,576–127,647 bp · +
rps7 · PZ130073.1 · 138,586–139,053 bp · +
ndhB · PZ130073.1 · 139,319–141,526 bp · +
trnL-CAA · PZ130073.1 · 142,087–142,167 bp · +
trnI-CAU · PZ130073.1 · 149,654–149,727 bp · +
rpl23 · PZ130073.1 · 149,893–150,174 bp · +
rpl2 · PZ130073.1 · 150,193–151,680 bp · +
rps19 · PZ130073.1 · 151,742–151,784 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Thymus subnervosus
ANNOTATED PLASTOME
PZ130073.1
151,784 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37946 75892 113838 151784 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 407 1465 1059 Locate
trnK-UUU gene − 1686 4226 2541 Locate
matK gene − 1966 3489 1524 Locate
rps16 gene − 4773 5917 1145 Locate
trnQ-UUG gene − 6831 6902 72 Locate
psbK gene + 7283 7468 186 Locate
psbI gene + 7851 7961 111 Locate
trnS-GCU gene − 8113 8200 88 Locate
trnG-UCC gene + 8925 9676 752 Locate
trnR-UCU gene + 9857 9928 72 Locate
atpA gene − 10035 11558 1524 Locate
atpF gene − 11654 12901 1248 Locate
atpH gene − 13168 13413 246 Locate
atpI gene − 14450 15193 744 Locate
rps2 gene − 15416 16126 711 Locate
rpoC2 gene − 16333 20526 4194 Locate
rpoC1 gene − 20676 23480 2805 Locate
rpoB gene − 23507 26719 3213 Locate
trnC-GCA gene + 27849 27919 71 Locate
petN gene + 28080 28169 90 Locate
psbM gene − 29146 29250 105 Locate
trnD-GUC gene − 29768 29841 74 Locate
trnY-GUA gene − 29952 30035 84 Locate
trnE-UUC gene − 30115 30187 73 Locate
trnT-GGU gene + 30752 30823 72 Locate
psbD gene + 32164 33225 1062 Locate
psbC gene + 33173 34594 1422 Locate
trnS-UGA gene − 34842 34934 93 Locate
psbZ gene + 35280 35468 189 Locate
trnG-GCC gene + 35740 35810 71 Locate
trnfM-CAU gene − 35973 36046 74 Locate
rps14 gene − 36191 36493 303 Locate
psaB gene − 36617 38821 2205 Locate
psaA gene − 38847 41099 2253 Locate
ycf3 gene − 41865 43793 1929 Locate
trnS-GGA gene + 44636 44722 87 Locate
rps4 gene − 45010 45615 606 Locate
trnT-UGU gene − 46009 46081 73 Locate
trnL-UAA gene + 46758 47311 554 Locate
trnF-GAA gene + 47604 47676 73 Locate
ndhJ gene − 48309 48785 477 Locate
ndhK gene − 48896 49573 678 Locate
ndhC gene − 49625 49987 363 Locate
trnV-UAC gene − 50956 51598 643 Locate
trnM-CAU gene + 51779 51851 73 Locate
atpE gene − 52047 52448 402 Locate
atpB gene − 52445 53935 1491 Locate
rbcL gene + 54739 56172 1434 Locate
accD gene + 56857 58338 1482 Locate
psaI gene + 58802 58912 111 Locate
ycf4 gene + 59361 59915 555 Locate
cemA gene + 60557 61246 690 Locate
petA gene + 61456 62418 963 Locate
psbJ gene − 63414 63536 123 Locate
psbL gene − 63671 63787 117 Locate
psbF gene − 63811 63930 120 Locate
psbE gene − 63945 64196 252 Locate
petL gene + 65068 65163 96 Locate
petG gene + 65333 65446 114 Locate
trnW-CCA gene − 65567 65640 74 Locate
trnP-UGG gene − 65814 65887 74 Locate
psaJ gene + 66167 66301 135 Locate
rpl33 gene + 66749 66952 204 Locate
rps18 gene + 67123 67428 306 Locate
rpl20 gene − 67662 68048 387 Locate
rps12 gene − 68852 68965 114 Locate
clpP gene − 69090 70996 1907 Locate
psbB gene + 71448 72974 1527 Locate
psbT gene + 73150 73251 102 Locate
psbN gene − 73320 73451 132 Locate
psbH gene + 73557 73778 222 Locate
petB gene + 73904 75287 1384 Locate
petD gene + 75475 76657 1183 Locate
rpoA gene − 76840 77847 1008 Locate
rps11 gene − 77919 78335 417 Locate
rpl36 gene − 78445 78558 114 Locate
infA gene − 78622 78855 234 Locate
rps8 gene − 78981 79385 405 Locate
rpl14 gene − 79555 79923 369 Locate
rpl16 gene − 80055 81329 1275 Locate
rps3 gene − 81474 82136 663 Locate
rpl22 gene − 82121 82588 468 Locate
rps19 gene − 82658 82936 279 Locate
rpl2 gene − 82998 84485 1488 Locate
rpl23 gene − 84504 84785 282 Locate
trnI-CAU gene − 84951 85024 74 Locate
ycf2 gene + 85113 91916 6804 Locate
ycf15 gene + 92058 92255 198 Locate
trnL-CAA gene − 92511 92591 81 Locate
ndhB gene − 93152 95359 2208 Locate
rps7 gene − 95625 96092 468 Locate
rps12 gene − 96146 96939 794 Locate
trnV-GAC gene + 98576 98647 72 Locate
rrn16 gene + 98874 100364 1491 Locate
trnI-GAU gene + 100663 101683 1021 Locate
trnA-UGC gene + 101753 102630 878 Locate
rrn23 gene + 102796 105606 2811 Locate
rrn4.5 gene + 105705 105807 103 Locate
rrn5 gene + 106068 106188 121 Locate
trnR-ACG gene + 106427 106505 79 Locate
trnN-GUU gene − 107031 107102 72 Locate
ycf1 gene + 107432 108562 1131 Locate
ndhF gene − 108456 110687 2232 Locate
rpl32 gene + 111165 111335 171 Locate
trnL-UAG gene + 112063 112142 80 Locate
ccsA gene + 112246 113223 978 Locate
ndhD gene − 113470 114858 1389 Locate
psaC gene − 115094 115339 246 Locate
ndhE gene − 115574 115879 306 Locate
ndhG gene − 116103 116633 531 Locate
ndhI gene − 117018 117524 507 Locate
ndhA gene − 117608 119697 2090 Locate
ndhH gene − 119699 120880 1182 Locate
rps15 gene − 120980 121252 273 Locate
ycf1 gene − 121703 127246 5544 Locate
trnN-GUU gene + 127576 127647 72 Locate
trnR-ACG gene − 128173 128251 79 Locate
rrn5 gene − 128490 128610 121 Locate
rrn4.5 gene − 128871 128973 103 Locate
rrn23 gene − 129072 131882 2811 Locate
trnA-UGC gene − 132048 132925 878 Locate
trnI-GAU gene − 132995 134015 1021 Locate
rrn16 gene − 134314 135804 1491 Locate
trnV-GAC gene − 136031 136102 72 Locate
rps12 gene + 137739 138532 794 Locate
rps7 gene + 138586 139053 468 Locate
ndhB gene + 139319 141526 2208 Locate
trnL-CAA gene + 142087 142167 81 Locate
ycf15 gene − 142423 142620 198 Locate
ycf2 gene − 142762 149565 6804 Locate
trnI-CAU gene + 149654 149727 74 Locate
rpl23 gene + 149893 150174 282 Locate
rpl2 gene + 150193 151680 1488 Locate
rps19 gene + 151742 151784 43 Locate
Status Available
Accession PZ130073.1
Length 151,784 bp
GC content 37.9%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources