Coordinate-aware organelle record

Vitex rotundifolia chloroplast genome

Available NC_050991.1 154,370 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	8	82	74
psbA	gene	photosystem-ii	−	431	1490	1059
trnK-UUU	gene	translation-rna	−	1722	4301	2579
matK	gene	other	−	2021	3551	1530
rps16	gene	ribosomal-protein	−	5111	6270	1159
trnQ-UUG	gene	translation-rna	−	7457	7529	72
psbK	gene	photosystem-ii	+	7862	8048	186
psbI	gene	photosystem-ii	+	8430	8541	111
trnS-GCU	gene	translation-rna	−	8669	8757	88
trnG-UCC	gene	translation-rna	+	9478	10226	748
trnR-UCU	gene	translation-rna	+	10407	10479	72
atpA	gene	atp-synthase	−	10582	12106	1524
atpF	gene	atp-synthase	−	12186	13455	1269
atpH	gene	atp-synthase	−	13853	14099	246
atpI	gene	atp-synthase	−	15133	15877	744
rps2	gene	ribosomal-protein	−	16126	16837	711
rpoC2	gene	rna-polymerase	−	17066	21236	4170
rpoC1	gene	rna-polymerase	−	21402	24243	2841
rpoB	gene	rna-polymerase	−	24269	27458	3189
trnC-GCA	gene	translation-rna	+	28654	28725	71
petN	gene	cytochrome	+	29581	29671	90
psbM	gene	photosystem-ii	−	30677	30782	105
trnD-GUC	gene	translation-rna	−	31308	31382	74
trnY-GUA	gene	translation-rna	−	31490	31574	84
trnE-UUC	gene	translation-rna	−	31633	31706	73
trnT-GGU	gene	translation-rna	+	32132	32204	72
psbD	gene	photosystem-ii	+	33577	34639	1062
psbC	gene	photosystem-ii	+	34586	36008	1422
trnS-UGA	gene	translation-rna	−	36259	36352	93
psbZ	gene	photosystem-ii	+	36685	36874	189
trnG-GCC	gene	translation-rna	+	37143	37214	71
trnfM-CAU	gene	translation-rna	−	37371	37445	74
rps14	gene	ribosomal-protein	−	37594	37897	303
psaB	gene	photosystem-i	−	38019	40224	2205
psaA	gene	photosystem-i	−	40249	42502	2253
ycf3	gene	other	−	43235	45179	1944
trnS-GGA	gene	translation-rna	+	45972	46059	87
rps4	gene	ribosomal-protein	−	46340	46946	606
trnT-UGU	gene	translation-rna	−	47314	47387	73
trnL-UAA	gene	translation-rna	+	48050	48620	570
trnF-GAA	gene	translation-rna	+	48925	48998	73
ndhJ	gene	nad-dehydrogenase	−	49667	50144	477
ndhK	gene	nad-dehydrogenase	−	50250	50928	678
ndhC	gene	nad-dehydrogenase	−	50981	51344	363
trnV-UAC	gene	translation-rna	−	52380	53040	660
trnM-CAU	gene	translation-rna	+	53216	53289	73
atpE	gene	atp-synthase	−	53515	53917	402
atpB	gene	atp-synthase	−	53913	55410	1497
rbcL	gene	other	+	56207	57650	1443
accD	gene	other	+	58347	59829	1482
psaI	gene	photosystem-i	+	60554	60665	111
ycf4	gene	other	+	61105	61660	555
cemA	gene	other	+	62322	63012	690
petA	gene	cytochrome	+	63226	64189	963
psbJ	gene	photosystem-ii	−	65239	65362	123
psbL	gene	photosystem-ii	−	65495	65612	117
psbF	gene	photosystem-ii	−	65635	65755	120
psbE	gene	photosystem-ii	−	65769	66021	252
petL	gene	cytochrome	+	66955	67051	96
petG	gene	cytochrome	+	67225	67339	114
trnW-CCA	gene	translation-rna	−	67461	67535	74
trnP-UGG	gene	translation-rna	−	67690	67764	74
psaJ	gene	photosystem-i	+	68041	68176	135
rpl33	gene	ribosomal-protein	+	68653	68854	201
rps18	gene	ribosomal-protein	+	69022	69328	306
rpl20	gene	ribosomal-protein	−	69585	69972	387
rps12	gene	ribosomal-protein	−	70804	99197	28393
rps12	gene	ribosomal-protein	+	70804	141051	70247
clpP	gene	other	−	71050	73033	1983
psbB	gene	photosystem-ii	+	73502	75029	1527
psbT	gene	photosystem-ii	+	75230	75338	108
psbN	gene	photosystem-ii	−	75405	75537	132
psbH	gene	photosystem-ii	+	75624	75864	240
petB	gene	cytochrome	+	75988	77375	1387
petD	gene	cytochrome	+	77563	78786	1223
rpoA	gene	rna-polymerase	−	78947	79967	1020
rps11	gene	ribosomal-protein	−	80038	80455	417
rpl36	gene	ribosomal-protein	−	80556	80670	114
infA	gene	other	−	80765	80999	234
rps8	gene	ribosomal-protein	−	81123	81528	405
rpl14	gene	ribosomal-protein	−	81712	82081	369
rpl16	gene	ribosomal-protein	−	82207	83544	1337
rps3	gene	ribosomal-protein	−	83677	84340	663
rpl22	gene	ribosomal-protein	−	84324	84792	468
rps19	gene	ribosomal-protein	−	84843	85122	279
rpl2	gene	ribosomal-protein	−	85182	86664	1482
rpl23	gene	ribosomal-protein	−	86682	86964	282
trnI-CAU	gene	translation-rna	−	87129	87203	74
ycf2	gene	other	+	87311	94175	6864
trnL-CAA	gene	translation-rna	−	94774	94855	81
ndhB	gene	nad-dehydrogenase	−	95402	97614	2212
rps7	gene	ribosomal-protein	−	97877	98345	468
trnV-GAC	gene	translation-rna	+	100795	100867	72
rrn16	gene	ribosomal-rna	+	101094	102585	1491
trnI-GAU	gene	translation-rna	+	102883	103902	1019
trnA-UGC	gene	translation-rna	+	103966	104844	878
rrn23	gene	ribosomal-rna	+	105012	107823	2811
rrn4.5	gene	ribosomal-rna	+	107921	108024	103
rrn5	gene	ribosomal-rna	+	108279	108400	121
trnR-ACG	gene	translation-rna	+	108643	108717	74
trnN-GUU	gene	translation-rna	−	109286	109358	72
ycf1	gene	other	+	109689	110766	1077
ndhF	gene	nad-dehydrogenase	−	110734	112981	2247
rpl32	gene	ribosomal-protein	+	113519	113696	177
trnL-UAG	gene	translation-rna	+	114503	114583	80
ccsA	gene	other	+	114673	115660	987
ndhD	gene	nad-dehydrogenase	−	115943	117446	1503
psaC	gene	photosystem-i	−	117571	117817	246
ndhE	gene	nad-dehydrogenase	−	118079	118385	306
ndhG	gene	nad-dehydrogenase	−	118598	119129	531
ndhI	gene	nad-dehydrogenase	−	119484	119991	507
ndhA	gene	nad-dehydrogenase	−	120073	122254	2181
ndhH	gene	nad-dehydrogenase	−	122255	123437	1182
rps15	gene	ribosomal-protein	−	123535	123808	273
ycf1	gene	other	−	124222	129760	5538
trnN-GUU	gene	translation-rna	+	130091	130163	72
trnR-ACG	gene	translation-rna	−	130732	130806	74
rrn5	gene	ribosomal-rna	−	131049	131170	121
rrn4.5	gene	ribosomal-rna	−	131425	131528	103
rrn23	gene	ribosomal-rna	−	131626	134437	2811
trnA-UGC	gene	translation-rna	−	134605	135483	878
trnI-GAU	gene	translation-rna	−	135547	136566	1019
rrn16	gene	ribosomal-rna	−	136864	138355	1491
trnV-GAC	gene	translation-rna	−	138582	138654	72
rps7	gene	ribosomal-protein	+	141104	141572	468
ndhB	gene	nad-dehydrogenase	+	141835	144047	2212
trnL-CAA	gene	translation-rna	+	144594	144675	81
ycf2	gene	other	−	145274	152138	6864
trnI-CAU	gene	translation-rna	+	152246	152320	74
rpl23	gene	ribosomal-protein	+	152485	152767	282
rpl2	gene	ribosomal-protein	+	152785	154267	1482
rps19	gene	ribosomal-protein	+	154327	154370	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050991.1DNA · accDNC_050991DNA · atpBNC_050991DNA · matKNC_050991DNA · ndhFNC_050991DNA · psbANC_050991DNA · rbcLNC_050991DNA · rps12NC_050991DNA · ycf1NC_050991