Coordinate-aware organelle record

Volkameria inermis chloroplast genome

Available PQ463296.1 151,066 bp 132 coordinate-linked features
IRIRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 5-78 bp · − strandpsbA · gene · 248-1,306 bp · − strandtrnK-UUU · gene · 1,522-4,100 bp · − strandmatK · gene · 1,823-3,358 bp · − strandrps16 · gene · 4,747-5,898 bp · − strandtrnQ-UUG · gene · 6,800-6,871 bp · − strandpsbK · gene · 7,212-7,397 bp · + strandpsbI · gene · 7,807-7,917 bp · + strandtrnS-GCU · gene · 8,051-8,138 bp · − strandtrnG-UCC · gene · 8,667-9,429 bp · + strandtrnR-UCU · gene · 9,618-9,689 bp · + strandatpA · gene · 9,800-11,323 bp · − strandatpF · gene · 11,428-12,667 bp · − strandatpH · gene · 13,042-13,287 bp · − strandatpI · gene · 14,291-15,034 bp · − strandrps2 · gene · 15,284-15,994 bp · − strandrpoC2 · gene · 16,187-20,365 bp · − strandrpoC1 · gene · 20,532-23,340 bp · − strandrpoB · gene · 23,367-26,579 bp · − strandtrnC-GCA · gene · 27,764-27,834 bp · + strandpetN · gene · 28,396-28,485 bp · + strandpsbM · gene · 29,416-29,520 bp · − strandtrnD-GUC · gene · 30,042-30,115 bp · − strandtrnY-GUA · gene · 30,230-30,313 bp · − strandtrnE-UUC · gene · 30,373-30,445 bp · − strandtrnT-GGU · gene · 30,684-30,755 bp · + strandpsbD · gene · 31,920-32,981 bp · + strandpsbC · gene · 32,929-34,350 bp · + strandtrnS-UGA · gene · 34,611-34,703 bp · − strandpsbZ · gene · 35,028-35,216 bp · + strandtrnG-GCC · gene · 35,437-35,507 bp · + strandtrnM-CAU · gene · 35,684-35,757 bp · − strandrps14 · gene · 35,902-36,204 bp · − strandpsaB · gene · 36,327-38,531 bp · − strandpsaA · gene · 38,557-40,809 bp · − strandycf3 · gene · 41,541-43,413 bp · − strandtrnS-GGA · gene · 44,079-44,165 bp · + strandrps4 · gene · 44,476-45,081 bp · − strandtrnT-UGU · gene · 45,451-45,523 bp · − strandtrnL-UAA · gene · 46,223-46,793 bp · + strandtrnP-GAA · gene · 47,091-47,163 bp · + strandndhJ · gene · 47,795-48,271 bp · − strandndhK · gene · 48,372-49,049 bp · − strandndhC · gene · 49,102-49,464 bp · − strandtrnV-UAC · gene · 50,314-50,977 bp · − strandtrnM-CAU · gene · 51,158-51,230 bp · + strandatpE · gene · 51,486-51,887 bp · − strandatpB · gene · 51,884-53,380 bp · − strandrbcL · gene · 54,165-55,604 bp · + strandaccD · gene · 56,259-57,791 bp · + strandpsaI · gene · 58,507-58,617 bp · + strandycf4 · gene · 59,039-59,593 bp · + strandcemA · gene · 60,060-60,749 bp · + strandpetA · gene · 60,957-61,919 bp · + strandpsbJ · gene · 62,815-62,937 bp · − strandpsbL · gene · 63,071-63,187 bp · − strandpsbF · gene · 63,211-63,330 bp · − strandpsbE · gene · 63,345-63,596 bp · − strandpetL · gene · 64,507-64,602 bp · + strandpetG · gene · 64,780-64,893 bp · + strandtrnW-CCA · gene · 65,015-65,088 bp · − strandtrnP-UGG · gene · 65,256-65,329 bp · − strandpsaJ · gene · 65,613-65,747 bp · + strandrpl33 · gene · 66,230-66,430 bp · + strandrps18 · gene · 66,597-66,902 bp · + strandrpsl20 · gene · 67,138-67,524 bp · − strandrps12 · gene · 68,361-96,591 bp · − strandrps12 · gene · 68,361-137,780 bp · + strandclpP · gene · 68,604-70,560 bp · − strandpsbB · gene · 71,010-72,536 bp · + strandpsbT · gene · 72,713-72,820 bp · + strandpsbN · gene · 72,881-73,012 bp · − strandpsbH · gene · 73,118-73,339 bp · + strandpetB · gene · 73,461-74,827 bp · + strandpetD · gene · 75,016-76,232 bp · + strandrpoA · gene · 76,420-77,433 bp · − strandrps11 · gene · 77,510-77,926 bp · − strandrpl36 · gene · 78,029-78,142 bp · − strandinfA · gene · 78,238-78,471 bp · − strandrps8 · gene · 78,596-79,000 bp · − strandrpl14 · gene · 79,173-79,541 bp · − strandrpl16 · gene · 79,658-80,952 bp · − strandrps3 · gene · 81,112-81,762 bp · − strandrpl22 · gene · 81,747-82,214 bp · − strandrps19 · gene · 82,270-82,548 bp · − strandrpl2 · gene · 82,603-84,093 bp · − strandrpl23 · gene · 84,112-84,393 bp · − strandtrnI-CAU · gene · 84,559-84,632 bp · − strandycf2 · gene · 84,721-91,560 bp · + strandycf15 · gene · 91,636-92,028 bp · + strandtrnL-CAA · gene · 92,159-92,239 bp · − strandndhB · gene · 92,789-94,999 bp · − strandrps7 · gene · 95,274-95,741 bp · − strandtrnV-GAC · gene · 98,180-98,251 bp · + strandrrn16 · gene · 98,479-99,968 bp · − strandtrnI-GAU · gene · 100,267-101,285 bp · + strandtrnA-UGC · gene · 101,350-102,229 bp · + strandrrn23 · gene · 102,391-105,190 bp · + strandrrn4.5 · gene · 105,292-105,394 bp · + strandrrn5 · gene · 105,655-105,775 bp · + strandtrnR-ACG · gene · 106,010-106,083 bp · + strandtrnN-GUU · gene · 106,647-106,718 bp · − strandndhF · gene · 108,136-110,361 bp · − strandrpl32 · gene · 110,931-111,107 bp · + strandtrnL-UAG · gene · 111,553-111,632 bp · + strandccsA · gene · 111,717-112,682 bp · + strandndhD · gene · 112,923-114,452 bp · − strandpsaC · gene · 114,547-114,792 bp · − strandndhE · gene · 115,044-115,349 bp · − strandndhG · gene · 115,560-116,090 bp · − strandndhI · gene · 116,443-116,949 bp · − strandndhA · gene · 117,030-119,050 bp · − strandndhH · gene · 119,052-120,233 bp · − strandrps15 · gene · 120,330-120,602 bp · − strandycf1 · gene · 120,939-126,638 bp · − strandtrnN-GUU · gene · 126,857-126,928 bp · + strandtrnR-ACG · gene · 127,492-127,565 bp · − strandrrn5 · gene · 127,800-127,920 bp · − strandrrn4.5 · gene · 128,181-128,283 bp · − strandrrn23 · gene · 128,385-131,184 bp · − strandtrnA-UGC · gene · 131,346-132,225 bp · − strandtrnI-GAU · gene · 132,290-133,308 bp · − strandrrn16 · gene · 133,607-135,096 bp · + strandtrnV-GAC · gene · 135,324-135,395 bp · − strandrps7 · gene · 137,834-138,301 bp · + strandndhB · gene · 138,576-140,786 bp · + strandtrnL-CAA · gene · 141,336-141,416 bp · + strandycf15 · gene · 141,547-141,939 bp · − strandycf2 · gene · 142,015-148,854 bp · − strandtrnI-CAU · gene · 148,943-149,016 bp · + strandrpl23 · gene · 149,182-149,463 bp · + strandrpl2 · gene · 149,482-150,972 bp · + strandVolkameria inermisANNOTATED PLASTOMEPQ463296.1151,066 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PQ463296.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−47874
psbAgenephotosystem-ii−24713061059
trnK-UUUgenetranslation-rna−152141002579
matKgeneother−182233581536
rps16generibosomal-protein−474658981152
trnQ-UUGgenetranslation-rna−6799687172
psbKgenephotosystem-ii+72117397186
psbIgenephotosystem-ii+78067917111
trnS-GCUgenetranslation-rna−8050813888
trnG-UCCgenetranslation-rna+86669429763
trnR-UCUgenetranslation-rna+9617968972
atpAgeneatp-synthase−9799113231524
atpFgeneatp-synthase−11427126671240
atpHgeneatp-synthase−1304113287246
atpIgeneatp-synthase−1429015034744
rps2generibosomal-protein−1528315994711
rpoC2generna-polymerase−16186203654179
rpoC1generna-polymerase−20531233402809
rpoBgenerna-polymerase−23366265793213
trnC-GCAgenetranslation-rna+277632783471
petNgenecytochrome+283952848590
psbMgenephotosystem-ii−2941529520105
trnD-GUCgenetranslation-rna−300413011574
trnY-GUAgenetranslation-rna−302293031384
trnE-UUCgenetranslation-rna−303723044573
trnT-GGUgenetranslation-rna+306833075572
psbDgenephotosystem-ii+31919329811062
psbCgenephotosystem-ii+32928343501422
trnS-UGAgenetranslation-rna−346103470393
psbZgenephotosystem-ii+3502735216189
trnG-GCCgenetranslation-rna+354363550771
trnM-CAUgenetranslation-rna−356833575774
rps14generibosomal-protein−3590136204303
psaBgenephotosystem-i−36326385312205
psaAgenephotosystem-i−38556408092253
ycf3geneother−41540434131873
trnS-GGAgenetranslation-rna+440784416587
rps4generibosomal-protein−4447545081606
trnT-UGUgenetranslation-rna−454504552373
trnL-UAAgenetranslation-rna+4622246793571
trnP-GAAgenetranslation-rna+470904716373
ndhJgenenad-dehydrogenase−4779448271477
ndhKgenenad-dehydrogenase−4837149049678
ndhCgenenad-dehydrogenase−4910149464363
trnV-UACgenetranslation-rna−5031350977664
trnM-CAUgenetranslation-rna+511575123073
atpEgeneatp-synthase−5148551887402
atpBgeneatp-synthase−51883533801497
rbcLgeneother+54164556041440
accDgeneother+56258577911533
psaIgenephotosystem-i+5850658617111
ycf4geneother+5903859593555
cemAgeneother+6005960749690
petAgenecytochrome+6095661919963
psbJgenephotosystem-ii−6281462937123
psbLgenephotosystem-ii−6307063187117
psbFgenephotosystem-ii−6321063330120
psbEgenephotosystem-ii−6334463596252
petLgenecytochrome+645066460296
petGgenecytochrome+6477964893114
trnW-CCAgenetranslation-rna−650146508874
trnP-UGGgenetranslation-rna−652556532974
psaJgenephotosystem-i+6561265747135
rpl33generibosomal-protein+6622966430201
rps18generibosomal-protein+6659666902306
rpsl20generibosomal-protein−6713767524387
rps12generibosomal-protein−683609659128231
rps12generibosomal-protein+6836013778069420
clpPgeneother−68603705601957
psbBgenephotosystem-ii+71009725361527
psbTgenephotosystem-ii+7271272820108
psbNgenephotosystem-ii−7288073012132
psbHgenephotosystem-ii+7311773339222
petBgenecytochrome+73460748271367
petDgenecytochrome+75015762321217
rpoAgenerna-polymerase−76419774331014
rps11generibosomal-protein−7750977926417
rpl36generibosomal-protein−7802878142114
infAgeneother−7823778471234
rps8generibosomal-protein−7859579000405
rpl14generibosomal-protein−7917279541369
rpl16generibosomal-protein−79657809521295
rps3generibosomal-protein−8111181762651
rpl22generibosomal-protein−8174682214468
rps19generibosomal-protein−8226982548279
rpl2generibosomal-protein−82602840931491
rpl23generibosomal-protein−8411184393282
trnI-CAUgenetranslation-rna−845588463274
ycf2geneother+84720915606840
ycf15geneother+9163592028393
trnL-CAAgenetranslation-rna−921589223981
ndhBgenenad-dehydrogenase−92788949992211
rps7generibosomal-protein−9527395741468
trnV-GACgenetranslation-rna+981799825172
rrn16generibosomal-rna−98478999681490
trnI-GAUgenetranslation-rna+1002661012851019
trnA-UGCgenetranslation-rna+101349102229880
rrn23generibosomal-rna+1023901051902800
rrn4.5generibosomal-rna+105291105394103
rrn5generibosomal-rna+105654105775121
trnR-ACGgenetranslation-rna+10600910608374
trnN-GUUgenetranslation-rna−10664610671872
ndhFgenenad-dehydrogenase−1081351103612226
rpl32generibosomal-protein+110930111107177
trnL-UAGgenetranslation-rna+11155211163280
ccsAgeneother+111716112682966
ndhDgenenad-dehydrogenase−1129221144521530
psaCgenephotosystem-i−114546114792246
ndhEgenenad-dehydrogenase−115043115349306
ndhGgenenad-dehydrogenase−115559116090531
ndhIgenenad-dehydrogenase−116442116949507
ndhAgenenad-dehydrogenase−1170291190502021
ndhHgenenad-dehydrogenase−1190511202331182
rps15generibosomal-protein−120329120602273
ycf1geneother−1209381266385700
trnN-GUUgenetranslation-rna+12685612692872
trnR-ACGgenetranslation-rna−12749112756574
rrn5generibosomal-rna−127799127920121
rrn4.5generibosomal-rna−128180128283103
rrn23generibosomal-rna−1283841311842800
trnA-UGCgenetranslation-rna−131345132225880
trnI-GAUgenetranslation-rna−1322891333081019
rrn16generibosomal-rna+1336061350961490
trnV-GACgenetranslation-rna−13532313539572
rps7generibosomal-protein+137833138301468
ndhBgenenad-dehydrogenase+1385751407862211
trnL-CAAgenetranslation-rna+14133514141681
ycf15geneother−141546141939393
ycf2geneother−1420141488546840
trnI-CAUgenetranslation-rna+14894214901674
rpl23generibosomal-protein+149181149463282
rpl2generibosomal-protein+1494811509721491

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources