Coordinate-aware organelle record

Ziziphora capitata chloroplast genome

Available PV226239.1 151,725 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	399	1458	1059
trnK-UUU	gene	translation-rna	−	1685	4275	2590
matK	gene	other	−	2009	3539	1530
rps16	gene	ribosomal-protein	−	4810	5952	1142
trnQ-UUG	gene	translation-rna	−	6842	6914	72
psbK	gene	photosystem-ii	+	7294	7486	192
psbI	gene	photosystem-ii	+	7876	7987	111
trnS-GCU	gene	translation-rna	−	8118	8206	88
trnG-UCC	gene	translation-rna	+	8924	9676	752
trnR-UCU	gene	translation-rna	+	9856	9928	72
atpA	gene	atp-synthase	−	10036	11560	1524
atpF	gene	atp-synthase	−	11652	12907	1255
atpH	gene	atp-synthase	−	13179	13425	246
atpI	gene	atp-synthase	−	14462	15206	744
rps2	gene	ribosomal-protein	−	15430	16141	711
rpoC2	gene	rna-polymerase	−	16368	20568	4200
rpoC1	gene	rna-polymerase	−	20721	23533	2812
rpoB	gene	rna-polymerase	−	23559	26772	3213
trnC-GCA	gene	translation-rna	+	27874	27945	71
petN	gene	cytochrome	+	28105	28195	90
psbM	gene	photosystem-ii	−	29153	29258	105
trnD-GUC	gene	translation-rna	−	29782	29856	74
trnY-GUA	gene	translation-rna	−	29973	30057	84
trnE-UUC	gene	translation-rna	−	30136	30209	73
trnT-GGU	gene	translation-rna	+	30760	30832	72
psbD	gene	photosystem-ii	+	32203	33265	1062
psbC	gene	photosystem-ii	+	33212	34634	1422
trnS-UGA	gene	translation-rna	−	34879	34972	93
psbZ	gene	photosystem-ii	+	35310	35499	189
trnG-GCC	gene	translation-rna	+	35768	35839	71
trnfM-CAU	gene	translation-rna	−	36014	36088	74
rps14	gene	ribosomal-protein	−	36232	36535	303
psaB	gene	photosystem-i	−	36660	38865	2205
psaA	gene	photosystem-i	−	38890	41143	2253
ycf3	gene	other	−	41925	43867	1942
trnS-GGA	gene	translation-rna	+	44711	44798	87
rps4	gene	ribosomal-protein	−	45085	45691	606
trnT-UGU	gene	translation-rna	−	46060	46133	73
trnL-UAA	gene	translation-rna	+	46806	47383	577
trnF-GAA	gene	translation-rna	+	47675	47748	73
ndhJ	gene	nad-dehydrogenase	−	48388	48865	477
ndhC	gene	nad-dehydrogenase	−	49704	50067	363
trnV-UAC	gene	translation-rna	−	51031	51676	645
trnM-CAU	gene	translation-rna	+	51856	51929	73
atpE	gene	atp-synthase	−	52139	52541	402
atpB	gene	atp-synthase	−	52537	53971	1434
rbcL	gene	other	+	54789	56244	1455
accD	gene	other	+	57003	58485	1482
psaI	gene	photosystem-i	+	58957	59068	111
ycf4	gene	other	+	59518	60073	555
cemA	gene	other	+	60452	61142	690
petA	gene	cytochrome	+	61366	62329	963
psbJ	gene	photosystem-ii	−	63350	63473	123
psbL	gene	photosystem-ii	−	63602	63824	222
psbF	gene	photosystem-ii	−	63742	63862	120
psbE	gene	photosystem-ii	−	63876	64128	252
petL	gene	cytochrome	+	65000	65096	96
petG	gene	cytochrome	+	65265	65379	114
trnW-CCA	gene	translation-rna	−	65493	65567	74
trnP-UGG	gene	translation-rna	−	65740	65814	74
psaJ	gene	photosystem-i	+	66066	66225	159
rpl33	gene	ribosomal-protein	+	66677	66881	204
rps18	gene	ribosomal-protein	+	67031	67337	306
rpl20	gene	ribosomal-protein	−	67568	67955	387
rps12	gene	ribosomal-protein	−	68760	96976	28216
rps12	gene	ribosomal-protein	+	68760	138480	69720
clpP	gene	other	−	68996	70918	1922
psbB	gene	photosystem-ii	+	71383	72910	1527
psbT	gene	photosystem-ii	+	73107	73209	102
psbN	gene	photosystem-ii	−	73277	73409	132
psbH	gene	photosystem-ii	+	73514	73736	222
petB	gene	cytochrome	+	73869	75240	1371
petD	gene	cytochrome	+	75427	76622	1195
rpoA	gene	rna-polymerase	−	76821	77829	1008
rps11	gene	ribosomal-protein	−	77899	78316	417
rpl36	gene	ribosomal-protein	−	78425	78539	114
infA	gene	other	−	78634	78868	234
rps8	gene	ribosomal-protein	−	78992	79397	405
rpl14	gene	ribosomal-protein	−	79572	79941	369
rpl16	gene	ribosomal-protein	−	80079	81367	1288
rps3	gene	ribosomal-protein	−	81517	82180	663
rpl22	gene	ribosomal-protein	−	82164	82632	468
rps19	gene	ribosomal-protein	−	82701	82851	150
rpl2	gene	ribosomal-protein	−	83039	84537	1498
rpl23	gene	ribosomal-protein	−	84555	84837	282
trnI-CAU	gene	translation-rna	−	85002	85076	74
ycf2	gene	other	+	85164	91953	6789
ycf15	gene	other	+	92094	92292	198
trnL-CAA	gene	translation-rna	−	92547	92628	81
ndhB	gene	nad-dehydrogenase	−	93188	95342	2154
rps7	gene	ribosomal-protein	−	95661	96129	468
trnV-GAC	gene	translation-rna	+	98612	98690	78
rrn16	gene	ribosomal-rna	+	98916	100407	1491
trnI-GAU	gene	translation-rna	+	100705	101725	1020
trnA-UGC	gene	translation-rna	+	101795	102673	878
rrn23	gene	ribosomal-rna	+	102837	105646	2809
rrn4.5	gene	ribosomal-rna	+	105746	105849	103
rrn5	gene	ribosomal-rna	+	106109	106230	121
trnR-ACG	gene	translation-rna	+	106473	106547	74
trnN-GUU	gene	translation-rna	−	107071	107143	72
ndhF	gene	nad-dehydrogenase	−	108496	110728	2232
rpl32	gene	ribosomal-protein	+	111154	111325	171
trnL-UAG	gene	translation-rna	+	112085	112165	80
ccsA	gene	other	+	112266	113244	978
ndhD	gene	nad-dehydrogenase	−	113492	115022	1530
psaC	gene	photosystem-i	−	115122	115368	246
ndhE	gene	nad-dehydrogenase	−	115608	115911	303
ndhG	gene	nad-dehydrogenase	−	116128	116659	531
ndhI	gene	nad-dehydrogenase	−	117046	117553	507
ndhA	gene	nad-dehydrogenase	−	117628	119714	2086
ndhH	gene	nad-dehydrogenase	−	119715	120951	1236
rps15	gene	ribosomal-protein	−	120996	121269	273
ycf1	gene	other	−	121685	127301	5616
trnN-GUU	gene	translation-rna	+	127519	127591	72
trnR-ACG	gene	translation-rna	−	128115	128189	74
rrn5	gene	ribosomal-rna	−	128432	128553	121
rrn4.5	gene	ribosomal-rna	−	128813	128916	103
rrn23	gene	ribosomal-rna	−	129016	131825	2809
trnA-UGC	gene	translation-rna	−	131989	132867	878
trnI-GAU	gene	translation-rna	−	132937	133957	1020
rrn16	gene	ribosomal-rna	−	134255	135746	1491
trnV-GAC	gene	translation-rna	−	135978	136050	72
rps7	gene	ribosomal-protein	+	138533	139001	468
ndhB	gene	nad-dehydrogenase	+	139320	141474	2154
trnL-CAA	gene	translation-rna	+	142034	142115	81
ycf15	gene	other	−	142370	142568	198
ycf2	gene	other	−	142709	149498	6789
trnI-CAU	gene	translation-rna	+	149586	149660	74
rpl23	gene	ribosomal-protein	+	149825	150107	282
rpl2	gene	ribosomal-protein	+	150125	151623	1498

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV226239.1DNA · accDPV226239DNA · atpBPV226239DNA · matKPV226239DNA · ndhFPV226239DNA · psbAPV226239DNA · rbcLPV226239DNA · rps12PV226239DNA · ycf1PV226239