Coordinate-aware organelle record

Ziziphora clinopodioides chloroplast genome

Available PV116304.1 151,728 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	399	1458	1059
trnK-UUU	gene	translation-rna	−	1685	4275	2590
matK	gene	other	−	2009	3539	1530
rps16	gene	ribosomal-protein	−	4810	5958	1148
trnQ-UUG	gene	translation-rna	−	6853	6925	72
psbK	gene	photosystem-ii	+	7305	7497	192
psbI	gene	photosystem-ii	+	7886	7997	111
trnS-GCU	gene	translation-rna	−	8123	8211	88
trnG-UCC	gene	translation-rna	+	8910	9662	752
trnR-UCU	gene	translation-rna	+	9842	9914	72
atpA	gene	atp-synthase	−	10022	11546	1524
atpF	gene	atp-synthase	−	11638	12893	1255
atpH	gene	atp-synthase	−	13165	13411	246
atpI	gene	atp-synthase	−	14443	15187	744
rps2	gene	ribosomal-protein	−	15411	16122	711
rpoC2	gene	rna-polymerase	−	16352	20552	4200
rpoC1	gene	rna-polymerase	−	20705	23517	2812
rpoB	gene	rna-polymerase	−	23543	26756	3213
trnC-GCA	gene	translation-rna	+	27877	27948	71
petN	gene	cytochrome	+	28108	28198	90
psbM	gene	photosystem-ii	−	29156	29261	105
trnD-GUC	gene	translation-rna	−	29785	29859	74
trnY-GUA	gene	translation-rna	−	29976	30060	84
trnE-UUC	gene	translation-rna	−	30139	30212	73
trnT-GGU	gene	translation-rna	+	30763	30835	72
psbD	gene	photosystem-ii	+	32207	33269	1062
psbC	gene	photosystem-ii	+	33216	34638	1422
trnS-UGA	gene	translation-rna	−	34883	34976	93
psbZ	gene	photosystem-ii	+	35314	35503	189
trnG-GCC	gene	translation-rna	+	35772	35843	71
trnfM-CAU	gene	translation-rna	−	36018	36092	74
rps14	gene	ribosomal-protein	−	36236	36539	303
psaB	gene	photosystem-i	−	36664	38869	2205
psaA	gene	photosystem-i	−	38894	41147	2253
ycf3	gene	other	−	41933	43875	1942
trnS-GGA	gene	translation-rna	+	44719	44806	87
rps4	gene	ribosomal-protein	−	45093	45699	606
trnT-UGU	gene	translation-rna	−	46069	46142	73
trnL-UAA	gene	translation-rna	+	46815	47392	577
trnF-GAA	gene	translation-rna	+	47684	47757	73
ndhJ	gene	nad-dehydrogenase	−	48397	48874	477
ndhC	gene	nad-dehydrogenase	−	49713	50076	363
trnV-UAC	gene	translation-rna	−	51043	51688	645
trnM-CAU	gene	translation-rna	+	51868	51941	73
atpE	gene	atp-synthase	−	52151	52553	402
atpB	gene	atp-synthase	−	52549	53983	1434
rbcL	gene	other	+	54801	56256	1455
accD	gene	other	+	57009	58491	1482
psaI	gene	photosystem-i	+	58963	59074	111
ycf4	gene	other	+	59524	60079	555
cemA	gene	other	+	60458	61148	690
petA	gene	cytochrome	+	61372	62335	963
psbJ	gene	photosystem-ii	−	63359	63482	123
psbL	gene	photosystem-ii	−	63611	63833	222
psbF	gene	photosystem-ii	−	63751	63871	120
psbE	gene	photosystem-ii	−	63885	64137	252
petL	gene	cytochrome	+	65009	65105	96
petG	gene	cytochrome	+	65274	65388	114
trnW-CCA	gene	translation-rna	−	65502	65576	74
trnP-UGG	gene	translation-rna	−	65749	65823	74
psaJ	gene	photosystem-i	+	66074	66233	159
rpl33	gene	ribosomal-protein	+	66696	66900	204
rps18	gene	ribosomal-protein	+	67050	67356	306
rpl20	gene	ribosomal-protein	−	67587	67974	387
rps12	gene	ribosomal-protein	−	68782	96962	28180
rps12	gene	ribosomal-protein	+	68782	138489	69707
clpP	gene	other	−	69018	70943	1925
psbB	gene	photosystem-ii	+	71408	72935	1527
psbT	gene	photosystem-ii	+	73129	73231	102
psbN	gene	photosystem-ii	−	73299	73431	132
psbH	gene	photosystem-ii	+	73536	73758	222
petB	gene	cytochrome	+	73891	75263	1372
petD	gene	cytochrome	+	75450	76639	1189
rpoA	gene	rna-polymerase	−	76821	77829	1008
rps11	gene	ribosomal-protein	−	77899	78316	417
rpl36	gene	ribosomal-protein	−	78425	78539	114
infA	gene	other	−	78634	78868	234
rps8	gene	ribosomal-protein	−	78992	79397	405
rpl14	gene	ribosomal-protein	−	79572	79941	369
rpl16	gene	ribosomal-protein	−	80079	81359	1280
rps3	gene	ribosomal-protein	−	81509	82172	663
rpl22	gene	ribosomal-protein	−	82156	82624	468
rps19	gene	ribosomal-protein	−	82693	82843	150
rpl2	gene	ribosomal-protein	−	83031	84523	1492
rpl23	gene	ribosomal-protein	−	84541	84823	282
trnI-CAU	gene	translation-rna	−	84988	85062	74
ycf2	gene	other	+	85150	91939	6789
ycf15	gene	other	+	92080	92278	198
trnL-CAA	gene	translation-rna	−	92533	92614	81
ndhB	gene	nad-dehydrogenase	−	93174	95328	2154
rps7	gene	ribosomal-protein	−	95647	96115	468
trnV-GAC	gene	translation-rna	+	98598	98676	78
rrn16	gene	ribosomal-rna	+	98902	100393	1491
trnI-GAU	gene	translation-rna	+	100691	101711	1020
trnA-UGC	gene	translation-rna	+	101781	102659	878
rrn23	gene	ribosomal-rna	+	102823	105632	2809
rrn4.5	gene	ribosomal-rna	+	105732	105835	103
rrn5	gene	ribosomal-rna	+	106095	106216	121
trnR-ACG	gene	translation-rna	+	106459	106533	74
trnN-GUU	gene	translation-rna	−	107057	107129	72
ndhF	gene	nad-dehydrogenase	−	108482	110714	2232
rpl32	gene	ribosomal-protein	+	111140	111311	171
trnL-UAG	gene	translation-rna	+	112088	112168	80
ccsA	gene	other	+	112270	113248	978
ndhD	gene	nad-dehydrogenase	−	113496	115026	1530
psaC	gene	photosystem-i	−	115126	115372	246
ndhE	gene	nad-dehydrogenase	−	115612	115915	303
ndhG	gene	nad-dehydrogenase	−	116132	116663	531
ndhI	gene	nad-dehydrogenase	−	117049	117556	507
ndhA	gene	nad-dehydrogenase	−	117631	119717	2086
ndhH	gene	nad-dehydrogenase	−	119718	120954	1236
rps15	gene	ribosomal-protein	−	120999	121272	273
ycf1	gene	other	−	121688	127310	5622
trnN-GUU	gene	translation-rna	+	127528	127600	72
trnR-ACG	gene	translation-rna	−	128124	128198	74
rrn5	gene	ribosomal-rna	−	128441	128562	121
rrn4.5	gene	ribosomal-rna	−	128822	128925	103
rrn23	gene	ribosomal-rna	−	129025	131834	2809
trnA-UGC	gene	translation-rna	−	131998	132876	878
trnI-GAU	gene	translation-rna	−	132946	133966	1020
rrn16	gene	ribosomal-rna	−	134264	135755	1491
trnV-GAC	gene	translation-rna	−	135987	136059	72
rps7	gene	ribosomal-protein	+	138542	139010	468
ndhB	gene	nad-dehydrogenase	+	139329	141483	2154
trnL-CAA	gene	translation-rna	+	142043	142124	81
ycf15	gene	other	−	142379	142577	198
ycf2	gene	other	−	142718	149507	6789
trnI-CAU	gene	translation-rna	+	149595	149669	74
rpl23	gene	ribosomal-protein	+	149834	150116	282
rpl2	gene	ribosomal-protein	+	150134	151626	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV116304.1DNA · accDPV116304DNA · atpBPV116304DNA · matKPV116304DNA · ndhFPV116304DNA · psbAPV116304DNA · rbcLPV116304DNA · rps12PV116304DNA · ycf1PV116304