Coordinate-aware organelle record

Ziziphora pamiroalaica chloroplast genome

Available PV138186.1 151,725 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	399	1458	1059
trnK-UUU	gene	translation-rna	−	1685	4275	2590
matK	gene	other	−	2009	3539	1530
rps16	gene	ribosomal-protein	−	4811	5953	1142
trnQ-UUG	gene	translation-rna	−	6847	6919	72
psbK	gene	photosystem-ii	+	7299	7491	192
psbI	gene	photosystem-ii	+	7881	7992	111
trnS-GCU	gene	translation-rna	−	8122	8210	88
trnG-UCC	gene	translation-rna	+	8928	9680	752
trnR-UCU	gene	translation-rna	+	9860	9932	72
atpA	gene	atp-synthase	−	10040	11564	1524
atpF	gene	atp-synthase	−	11656	12920	1264
atpH	gene	atp-synthase	−	13192	13438	246
atpI	gene	atp-synthase	−	14469	15213	744
rps2	gene	ribosomal-protein	−	15436	16147	711
rpoC2	gene	rna-polymerase	−	16377	20577	4200
rpoC1	gene	rna-polymerase	−	20730	23542	2812
rpoB	gene	rna-polymerase	−	23568	26781	3213
trnC-GCA	gene	translation-rna	+	27903	27974	71
petN	gene	cytochrome	+	28134	28224	90
psbM	gene	photosystem-ii	−	29181	29286	105
trnD-GUC	gene	translation-rna	−	29810	29884	74
trnY-GUA	gene	translation-rna	−	30001	30085	84
trnE-UUC	gene	translation-rna	−	30164	30237	73
trnT-GGU	gene	translation-rna	+	30788	30860	72
psbD	gene	photosystem-ii	+	32231	33293	1062
psbC	gene	photosystem-ii	+	33240	34662	1422
trnS-UGA	gene	translation-rna	−	34907	35000	93
psbZ	gene	photosystem-ii	+	35338	35527	189
trnG-GCC	gene	translation-rna	+	35796	35867	71
trnfM-CAU	gene	translation-rna	−	36043	36117	74
rps14	gene	ribosomal-protein	−	36261	36564	303
psaB	gene	photosystem-i	−	36689	38894	2205
psaA	gene	photosystem-i	−	38919	41172	2253
ycf3	gene	other	−	41959	43901	1942
trnS-GGA	gene	translation-rna	+	44745	44832	87
rps4	gene	ribosomal-protein	−	45119	45725	606
trnT-UGU	gene	translation-rna	−	46094	46167	73
trnL-UAA	gene	translation-rna	+	46845	47422	577
trnF-GAA	gene	translation-rna	+	47714	47787	73
ndhJ	gene	nad-dehydrogenase	−	48427	48904	477
ndhC	gene	nad-dehydrogenase	−	49743	50106	363
trnV-UAC	gene	translation-rna	−	51071	51716	645
trnM-CAU	gene	translation-rna	+	51896	51969	73
atpE	gene	atp-synthase	−	52179	52581	402
atpB	gene	atp-synthase	−	52577	54011	1434
rbcL	gene	other	+	54828	56283	1455
accD	gene	other	+	57045	58527	1482
psaI	gene	photosystem-i	+	58999	59110	111
ycf4	gene	other	+	59560	60115	555
cemA	gene	other	+	60494	61184	690
petA	gene	cytochrome	+	61408	62371	963
psbJ	gene	photosystem-ii	−	63386	63509	123
psbL	gene	photosystem-ii	−	63638	63860	222
psbF	gene	photosystem-ii	−	63778	63898	120
psbE	gene	photosystem-ii	−	63912	64164	252
petL	gene	cytochrome	+	65036	65132	96
petG	gene	cytochrome	+	65301	65415	114
trnW-CCA	gene	translation-rna	−	65529	65603	74
trnP-UGG	gene	translation-rna	−	65776	65850	74
psaJ	gene	photosystem-i	+	66099	66258	159
rpl33	gene	ribosomal-protein	+	66721	66925	204
rps18	gene	ribosomal-protein	+	67075	67381	306
rpl20	gene	ribosomal-protein	−	67613	68000	387
rps12	gene	ribosomal-protein	−	68813	96997	28184
rps12	gene	ribosomal-protein	+	68813	138498	69685
clpP	gene	other	−	69049	70977	1928
psbB	gene	photosystem-ii	+	71442	72969	1527
psbT	gene	photosystem-ii	+	73160	73262	102
psbN	gene	photosystem-ii	−	73330	73462	132
psbH	gene	photosystem-ii	+	73567	73789	222
petB	gene	cytochrome	+	73922	75293	1371
petD	gene	cytochrome	+	75480	76669	1189
rpoA	gene	rna-polymerase	−	76868	77876	1008
rps11	gene	ribosomal-protein	−	77946	78363	417
rpl36	gene	ribosomal-protein	−	78472	78586	114
infA	gene	other	−	78681	78915	234
rps8	gene	ribosomal-protein	−	79039	79444	405
rpl14	gene	ribosomal-protein	−	79619	79988	369
rpl16	gene	ribosomal-protein	−	80126	81406	1280
rps3	gene	ribosomal-protein	−	81556	82219	663
rpl22	gene	ribosomal-protein	−	82203	82671	468
rps19	gene	ribosomal-protein	−	82740	82890	150
rpl2	gene	ribosomal-protein	−	83078	84576	1498
rpl23	gene	ribosomal-protein	−	84594	84876	282
trnI-CAU	gene	translation-rna	−	85041	85115	74
ycf2	gene	other	+	85203	91974	6771
ycf15	gene	other	+	92115	92313	198
trnL-CAA	gene	translation-rna	−	92568	92649	81
ndhB	gene	nad-dehydrogenase	−	93209	95363	2154
rps7	gene	ribosomal-protein	−	95682	96150	468
trnV-GAC	gene	translation-rna	+	98633	98711	78
rrn16	gene	ribosomal-rna	+	98937	100428	1491
trnI-GAU	gene	translation-rna	+	100726	101746	1020
trnA-UGC	gene	translation-rna	+	101816	102694	878
rrn23	gene	ribosomal-rna	+	102858	105667	2809
rrn4.5	gene	ribosomal-rna	+	105767	105870	103
rrn5	gene	ribosomal-rna	+	106130	106251	121
trnR-ACG	gene	translation-rna	+	106494	106568	74
trnN-GUU	gene	translation-rna	−	107092	107164	72
ndhF	gene	nad-dehydrogenase	−	108517	110749	2232
rpl32	gene	ribosomal-protein	+	111175	111346	171
trnL-UAG	gene	translation-rna	+	112106	112186	80
ccsA	gene	other	+	112287	113265	978
ndhD	gene	nad-dehydrogenase	−	113513	115043	1530
psaC	gene	photosystem-i	−	115143	115389	246
ndhE	gene	nad-dehydrogenase	−	115629	115932	303
ndhG	gene	nad-dehydrogenase	−	116149	116680	531
ndhI	gene	nad-dehydrogenase	−	117064	117571	507
ndhA	gene	nad-dehydrogenase	−	117646	119726	2080
ndhH	gene	nad-dehydrogenase	−	119727	120963	1236
rps15	gene	ribosomal-protein	−	121008	121281	273
ycf1	gene	other	−	121697	127319	5622
trnN-GUU	gene	translation-rna	+	127537	127609	72
trnR-ACG	gene	translation-rna	−	128133	128207	74
rrn5	gene	ribosomal-rna	−	128450	128571	121
rrn4.5	gene	ribosomal-rna	−	128831	128934	103
rrn23	gene	ribosomal-rna	−	129034	131843	2809
trnA-UGC	gene	translation-rna	−	132007	132885	878
trnI-GAU	gene	translation-rna	−	132955	133975	1020
rrn16	gene	ribosomal-rna	−	134273	135764	1491
trnV-GAC	gene	translation-rna	−	135996	136068	72
rps7	gene	ribosomal-protein	+	138551	139019	468
ndhB	gene	nad-dehydrogenase	+	139338	141492	2154
trnL-CAA	gene	translation-rna	+	142052	142133	81
ycf15	gene	other	−	142388	142586	198
ycf2	gene	other	−	142727	149498	6771
trnI-CAU	gene	translation-rna	+	149586	149660	74
rpl23	gene	ribosomal-protein	+	149825	150107	282
rpl2	gene	ribosomal-protein	+	150125	151623	1498

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV138186.1DNA · accDPV138186DNA · atpBPV138186DNA · matKPV138186DNA · ndhFPV138186DNA · psbAPV138186DNA · rbcLPV138186DNA · rps12PV138186DNA · ycf1PV138186