Coordinate-aware organelle record

Ajuga ovalifolia chloroplast genome

Available NC_084168.1 150,443 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	401	1460	1059
trnK-UUU	gene	translation-rna	−	1692	4262	2570
matK	gene	other	−	1958	3521	1563
rps16	gene	ribosomal-protein	−	5155	6299	1144
trnQ-UUG	gene	translation-rna	−	7120	7192	72
psbK	gene	photosystem-ii	+	7529	7715	186
psbI	gene	photosystem-ii	+	8095	8206	111
trnS-GCU	gene	translation-rna	−	8321	8409	88
trnG-UCC	gene	translation-rna	+	9088	9849	761
trnR-UCU	gene	translation-rna	+	10034	10106	72
atpA	gene	atp-synthase	−	10211	11735	1524
atpF	gene	atp-synthase	−	11850	13096	1246
atpH	gene	atp-synthase	−	13453	13699	246
atpI	gene	atp-synthase	−	14675	15419	744
rps2	gene	ribosomal-protein	−	15653	16364	711
rpoC2	gene	rna-polymerase	−	16662	20748	4086
rpoC1	gene	rna-polymerase	−	20908	23758	2850
rpoB	gene	rna-polymerase	−	23784	26997	3213
trnC-GCA	gene	translation-rna	+	28147	28218	71
petN	gene	cytochrome	+	28525	28615	90
psbM	gene	photosystem-ii	−	29161	29266	105
trnD-GUC	gene	translation-rna	−	29780	29854	74
trnY-GUA	gene	translation-rna	−	29953	30037	84
trnE-UUC	gene	translation-rna	−	30096	30169	73
trnT-GGU	gene	translation-rna	+	30575	30647	72
psbD	gene	photosystem-ii	+	32026	33088	1062
psbC	gene	photosystem-ii	+	33035	34457	1422
trnS-UGA	gene	translation-rna	−	34711	34804	93
psbZ	gene	photosystem-ii	+	35129	35318	189
trnG-GCC	gene	translation-rna	+	35584	35655	71
trnfM-CAU	gene	translation-rna	−	35833	35907	74
rps14	gene	ribosomal-protein	−	36051	36354	303
psaB	gene	photosystem-i	−	36476	38681	2205
psaA	gene	photosystem-i	−	38706	40959	2253
ycf3	gene	other	−	41680	43579	1899
trnS-GGA	gene	translation-rna	+	43999	44086	87
rps4	gene	ribosomal-protein	−	44396	45002	606
trnT-UGU	gene	translation-rna	−	45345	45418	73
trnL-UAA	gene	translation-rna	+	46071	46637	566
trnF-GAA	gene	translation-rna	+	46935	47008	73
ndhJ	gene	nad-dehydrogenase	−	47639	48116	477
ndhK	gene	nad-dehydrogenase	−	48216	48891	675
ndhC	gene	nad-dehydrogenase	−	48943	49306	363
trnV-UAC	gene	translation-rna	−	50131	50796	665
trnM-CAU	gene	translation-rna	+	50976	51049	73
atpE	gene	atp-synthase	−	51248	51650	402
atpB	gene	atp-synthase	−	51646	53143	1497
rbcL	gene	other	+	53940	55389	1449
accD	gene	other	+	56115	57591	1476
psaI	gene	photosystem-i	+	58044	58155	111
ycf4	gene	other	+	58567	59122	555
cemA	gene	other	+	59775	60465	690
petA	gene	cytochrome	+	60692	61655	963
psbJ	gene	photosystem-ii	−	62560	62683	123
psbL	gene	photosystem-ii	−	62824	62941	117
psbF	gene	photosystem-ii	−	62964	63084	120
psbE	gene	photosystem-ii	−	63098	63350	252
petL	gene	cytochrome	+	64239	64335	96
petG	gene	cytochrome	+	64504	64618	114
trnW-CCA	gene	translation-rna	−	64741	64815	74
trnP-UGG	gene	translation-rna	−	64976	65050	74
psaJ	gene	photosystem-i	+	65349	65484	135
rpl33	gene	ribosomal-protein	+	65969	66170	201
rps18	gene	ribosomal-protein	+	66360	66666	306
rpl20	gene	ribosomal-protein	−	66912	67299	387
rps12	gene	ribosomal-protein	−	68138	96177	28039
rps12	gene	ribosomal-protein	+	68138	137223	69085
clpP	gene	other	−	68377	70320	1943
psbB	gene	photosystem-ii	+	70777	72304	1527
psbT	gene	photosystem-ii	+	72479	72581	102
psbN	gene	photosystem-ii	−	72646	72778	132
psbH	gene	photosystem-ii	+	72883	73105	222
petB	gene	cytochrome	+	73221	74560	1339
petD	gene	cytochrome	+	74753	75968	1215
rpoA	gene	rna-polymerase	−	76153	77167	1014
rps11	gene	ribosomal-protein	−	77236	77653	417
rpl36	gene	ribosomal-protein	−	77754	77868	114
infA	gene	other	−	77963	78197	234
rps8	gene	ribosomal-protein	−	78327	78732	405
rpl14	gene	ribosomal-protein	−	78899	79268	369
rpl16	gene	ribosomal-protein	−	79395	80629	1234
rps3	gene	ribosomal-protein	−	80785	81436	651
rpl22	gene	ribosomal-protein	−	81420	81888	468
rps19	gene	ribosomal-protein	−	81942	82221	279
rpl2	gene	ribosomal-protein	−	82273	83762	1489
rpl23	gene	ribosomal-protein	−	83780	84062	282
trnI-CAU	gene	translation-rna	−	84227	84301	74
ycf2	gene	other	+	84389	91136	6747
ycf15	gene	other	+	91277	91475	198
trnL-CAA	gene	translation-rna	−	91742	91823	81
ndhB	gene	nad-dehydrogenase	−	92374	94584	2210
rps7	gene	ribosomal-protein	−	94859	95327	468
trnV-GAC	gene	translation-rna	+	97754	97826	72
rrn16S	gene	ribosomal-rna	+	98057	99547	1490
trnI-GAU	gene	translation-rna	+	99845	100865	1020
trnA-UGC	gene	translation-rna	+	100924	101801	877
rrn23S	gene	ribosomal-rna	+	101971	104781	2810
rrn4.5S	gene	ribosomal-rna	+	104879	104982	103
rrn5S	gene	ribosomal-rna	+	105211	105332	121
trnR-ACG	gene	translation-rna	+	105584	105658	74
trnN-GUU	gene	translation-rna	−	106217	106289	72
ycf1	gene	other	+	106630	107785	1155
ndhF	gene	nad-dehydrogenase	−	107675	109916	2241
rpl32	gene	ribosomal-protein	+	110498	110675	177
trnL-UAG	gene	translation-rna	+	111073	111153	80
ccsA	gene	other	+	111246	112218	972
ndhD	gene	nad-dehydrogenase	−	112475	114005	1530
psaC	gene	photosystem-i	−	114097	114343	246
ndhE	gene	nad-dehydrogenase	−	114593	114899	306
ndhG	gene	nad-dehydrogenase	−	115132	115663	531
ndhI	gene	nad-dehydrogenase	−	116000	116507	507
ndhA	gene	nad-dehydrogenase	−	116582	118655	2073
ndhH	gene	nad-dehydrogenase	−	118656	119838	1182
rps15	gene	ribosomal-protein	−	119934	120207	273
ycf1	gene	other	−	120582	123912	3330
trnN-GUU	gene	translation-rna	+	126314	126386	72
trnR-ACG	gene	translation-rna	−	126945	127019	74
rrn5S	gene	ribosomal-rna	−	127271	127392	121
rrn4.5S	gene	ribosomal-rna	−	127621	127724	103
rrn23S	gene	ribosomal-rna	−	127822	130632	2810
trnA-UGC	gene	translation-rna	−	130802	131679	877
trnI-GAU	gene	translation-rna	−	131738	132758	1020
rrn16S	gene	ribosomal-rna	−	133056	134546	1490
trnV-GAC	gene	translation-rna	−	134777	134849	72
rps7	gene	ribosomal-protein	+	137276	137744	468
ndhB	gene	nad-dehydrogenase	+	138019	140229	2210
trnL-CAA	gene	translation-rna	+	140780	140861	81
ycf15	gene	other	−	141128	141326	198
ycf2	gene	other	−	141467	148214	6747
trnI-CAU	gene	translation-rna	+	148302	148376	74
rpl23	gene	ribosomal-protein	+	148541	148823	282
rpl2	gene	ribosomal-protein	+	148841	150330	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_084168.1DNA · accDNC_084168DNA · atpBNC_084168DNA · matKNC_084168DNA · ndhFNC_084168DNA · psbANC_084168DNA · rbcLNC_084168DNA · rps12NC_084168DNA · ycf1NC_084168