Coordinate-aware organelle record

Ballota nigra chloroplast genome

Available NC_066022.1 151,909 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	4	79	75
psbA	gene	photosystem-ii	−	322	1381	1059
trnK-UUU	gene	translation-rna	−	1613	4193	2580
matK	gene	other	−	1922	3443	1521
rps16	gene	ribosomal-protein	−	4957	6097	1140
trnQ-UUG	gene	translation-rna	−	7073	7145	72
psbK	gene	photosystem-ii	+	7481	7667	186
psbI	gene	photosystem-ii	+	8045	8156	111
trnS-GCU	gene	translation-rna	−	8277	8365	88
trnG-UCC	gene	translation-rna	+	9042	9801	759
trnR-UCU	gene	translation-rna	+	9971	10043	72
atpA	gene	atp-synthase	−	10139	11663	1524
atpF	gene	atp-synthase	−	11749	12970	1221
atpH	gene	atp-synthase	−	13327	13573	246
atpI	gene	atp-synthase	−	14561	15305	744
rps2	gene	ribosomal-protein	−	15536	16247	711
rpoC2	gene	rna-polymerase	−	16467	20637	4170
rpoC1	gene	rna-polymerase	−	20794	23623	2829
rpoB	gene	rna-polymerase	−	23649	26862	3213
trnC-GCA	gene	translation-rna	+	27959	28030	71
petN	gene	cytochrome	+	28862	28952	90
psbM	gene	photosystem-ii	−	29714	29819	105
trnD-GUC	gene	translation-rna	−	30366	30440	74
trnY-GUA	gene	translation-rna	−	30545	30629	84
trnE-UUC	gene	translation-rna	−	30688	30761	73
trnT-GGU	gene	translation-rna	+	31357	31429	72
psbD	gene	photosystem-ii	+	32679	33741	1062
psbC	gene	photosystem-ii	+	33724	35110	1386
trnS-UGA	gene	translation-rna	−	35345	35438	93
psbZ	gene	photosystem-ii	+	35763	35952	189
trnG-GCC	gene	translation-rna	+	36176	36247	71
trnfM-CAU	gene	translation-rna	−	36393	36467	74
rps14	gene	ribosomal-protein	−	36623	36926	303
psaB	gene	photosystem-i	−	37053	39258	2205
psaA	gene	photosystem-i	−	39283	41536	2253
pafI	gene	other	−	42250	44182	1932
trnS-GGA	gene	translation-rna	+	44493	44580	87
rps4	gene	ribosomal-protein	−	44863	45469	606
trnT-UGU	gene	translation-rna	−	45871	45944	73
trnL-UAA	gene	translation-rna	+	46642	47216	574
trnF-GAA	gene	translation-rna	+	47514	47587	73
ndhJ	gene	nad-dehydrogenase	−	48248	48725	477
ndhK	gene	nad-dehydrogenase	−	48825	49587	762
ndhC	gene	nad-dehydrogenase	−	49556	49919	363
trnV-UAC	gene	translation-rna	−	50882	51547	665
trnM-CAU	gene	translation-rna	+	51735	51808	73
atpE	gene	atp-synthase	−	52030	52432	402
atpB	gene	atp-synthase	−	52428	53925	1497
rbcL	gene	other	+	54733	56179	1446
accD	gene	other	+	56869	58327	1458
psaI	gene	photosystem-i	+	59038	59149	111
pafII	gene	other	+	59603	60158	555
cemA	gene	other	+	60713	61403	690
petA	gene	cytochrome	+	61608	62571	963
psbJ	gene	photosystem-ii	−	63609	63732	123
psbL	gene	photosystem-ii	−	63869	63986	117
psbF	gene	photosystem-ii	−	64009	64129	120
psbE	gene	photosystem-ii	−	64143	64395	252
petL	gene	cytochrome	+	65319	65415	96
petG	gene	cytochrome	+	65589	65703	114
trnW-CCA	gene	translation-rna	−	65832	65906	74
trnP-UGG	gene	translation-rna	−	66069	66143	74
psaJ	gene	photosystem-i	+	66415	66550	135
rpl33	gene	ribosomal-protein	+	67020	67221	201
rps18	gene	ribosomal-protein	+	67367	67673	306
rpl20	gene	ribosomal-protein	−	67889	68264	375
rps12	gene	ribosomal-protein	−	69005	97082	28077
clpP1	gene	other	−	69249	71120	1871
psbB	gene	photosystem-ii	+	71557	73084	1527
psbT	gene	photosystem-ii	+	73275	73383	108
pbf1	gene	other	−	73443	73575	132
psbH	gene	photosystem-ii	+	73678	73900	222
petB	gene	cytochrome	+	74024	75398	1374
petD	gene	cytochrome	+	75592	76800	1208
rpoA	gene	rna-polymerase	−	76962	77976	1014
rps11	gene	ribosomal-protein	−	78047	78464	417
rpl36	gene	ribosomal-protein	−	78580	78694	114
infA	gene	other	−	78790	79024	234
rps8	gene	ribosomal-protein	−	79141	79555	414
rpl14	gene	ribosomal-protein	−	79728	80097	369
rpl16	gene	ribosomal-protein	−	80224	81520	1296
rps3	gene	ribosomal-protein	−	81666	82329	663
rpl22	gene	ribosomal-protein	−	82313	82778	465
rps19	gene	ribosomal-protein	−	82836	83115	279
rpl2	gene	ribosomal-protein	−	83167	84652	1485
rpl23	gene	ribosomal-protein	−	84670	84952	282
trnI-CAU	gene	translation-rna	−	85060	85134	74
ycf2	gene	other	+	85222	92098	6876
ycf15	gene	other	+	92140	92389	249
trnL-CAA	gene	translation-rna	−	92649	92730	81
ndhB	gene	nad-dehydrogenase	−	93274	95486	2212
rps7	gene	ribosomal-protein	−	95763	96231	468
trnV-GAC	gene	translation-rna	+	98693	98765	72
rrn16	gene	ribosomal-rna	+	98992	100483	1491
trnI-GAU	gene	translation-rna	+	100772	101781	1009
trnA-UGC	gene	translation-rna	+	101845	102724	879
rrn23	gene	ribosomal-rna	+	102915	105726	2811
rrn4.5	gene	ribosomal-rna	+	105824	105927	103
rrn5	gene	ribosomal-rna	+	106182	106303	121
trnR-ACG	gene	translation-rna	+	106537	106611	74
trnN-GUU	gene	translation-rna	−	107183	107255	72
ycf1	gene	other	+	107580	108699	1119
ndhF	gene	nad-dehydrogenase	−	108644	110867	2223
rpl32	gene	ribosomal-protein	+	111371	111548	177
trnL-UAG	gene	translation-rna	+	112274	112354	80
ccsA	gene	other	+	112444	113416	972
ndhD	gene	nad-dehydrogenase	−	113591	114986	1395
psaC	gene	photosystem-i	−	115214	115460	246
ndhE	gene	nad-dehydrogenase	−	115722	116028	306
ndhG	gene	nad-dehydrogenase	−	116243	116774	531
ndhI	gene	nad-dehydrogenase	−	117150	117657	507
ndhA	gene	nad-dehydrogenase	−	117743	119909	2166
ndhH	gene	nad-dehydrogenase	−	119910	121092	1182
rps15	gene	ribosomal-protein	−	121192	121465	273
ycf1	gene	other	−	121848	127404	5556
trnN-GUU	gene	translation-rna	+	127729	127801	72
trnR-ACG	gene	translation-rna	−	128373	128447	74
rrn5	gene	ribosomal-rna	−	128681	128802	121
rrn4.5	gene	ribosomal-rna	−	129057	129160	103
rrn23	gene	ribosomal-rna	−	129258	132069	2811
trnA-UGC	gene	translation-rna	−	132260	133139	879
trnI-GAU	gene	translation-rna	−	133203	134212	1009
rrn16	gene	ribosomal-rna	−	134501	135992	1491
trnV-GAC	gene	translation-rna	−	136219	136291	72
rps7	gene	ribosomal-protein	+	138753	139221	468
ndhB	gene	nad-dehydrogenase	+	139498	141710	2212
trnL-CAA	gene	translation-rna	+	142254	142335	81
ycf15	gene	other	−	142595	142844	249
ycf2	gene	other	−	142886	149762	6876
trnI-CAU	gene	translation-rna	+	149850	149924	74
rpl23	gene	ribosomal-protein	+	150032	150314	282
rpl2	gene	ribosomal-protein	+	150332	151817	1485

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_066022.1DNA · accDNC_066022DNA · atpBNC_066022DNA · matKNC_066022DNA · ndhFNC_066022DNA · psbANC_066022DNA · rbcLNC_066022DNA · rps12NC_066022DNA · ycf1NC_066022