Gene evidence record

pafII

BLAST this gene Align records

Species with evidence46

DNA records0

Coordinate loci46

Organelle assemblies46

Evidence stateAvailable

Functional annotation

Curated function is shown separately from locus and sequence evidence.

The current release contains evidence for pafII across 46 species, 46 organelle assemblies, and 46 annotated loci. Loci and species are counted separately because inverted-repeat copies duplicate a locus within one assembly.

Gene symbol: pafII
Full name: pafII
Pathway: —
Localization: —
Metabolite group: —
Curation: Evidence-only gene record

Species evidence

Species-level DNA, coordinate and organelle coverage for this symbol.

46 species

Species	Taxonomy	Organelle	Coordinate loci	Accessions
Ajuga bracteosa	AjugoideaeAjuga	chloroplast	1	`NC_068635.1`	Species evidence
Ajuga macrosperma	AjugoideaeAjuga	chloroplast	1	`NC_084166.1`	Species evidence
Ajuga turkestanica	AjugoideaeAjuga	chloroplast	1	`PV192927.1`	Species evidence
Ballota nigra	LamioideaeBallota	chloroplast	1	`NC_066022.1`	Species evidence
Callicarpa longifolia	CallicarpoideaeCallicarpa	chloroplast	1	`NC_084175.1`	Species evidence
Callicarpa sp XL-2023a	CallicarpoideaeCallicarpa	chloroplast	1	`OR263673.1`	Species evidence
Clerodendrum deflexum	AjugoideaeClerodendrum	chloroplast	1	`NC_084176.1`	Species evidence
Clinopodium menthifolium subsp. ascendens	NepetoideaeClinopodium	chloroplast	1	`ON641271.1`	Species evidence
Coleus amboinicus	NepetoideaeColeus	chloroplast	1	`PX923121.1`	Species evidence
Dracocephalum komarovii	NepetoideaeDracocephalum	chloroplast	1	`PX928789.1`	Species evidence
Dracocephalum officinale	NepetoideaeDracocephalum	chloroplast	1	`NC_066037.1`	Species evidence
Dracocephalum seravschanicum	NepetoideaeDracocephalum	chloroplast	1	`PX929666.1`	Species evidence
Glechoma cf hirsuta	NepetoideaeGlechoma	chloroplast	1	`PP203124.1`	Species evidence
Glechoma hederacea	NepetoideaeGlechoma	chloroplast	1	`PP203125.1`	Species evidence
Glechoma hirsuta	NepetoideaeGlechoma	chloroplast	1	`PP203126.1`	Species evidence
Lagochilus inebrians	LamioideaeLagochilus	chloroplast	1	`PV192925.1`	Species evidence
Lavandula maroccana	NepetoideaeLavandula	chloroplast	1	`PX569468.1`	Species evidence
Lavandula pedunculata subsp. lusitanica	NepetoideaeLavandula	chloroplast	1	`ON641259.1`	Species evidence
Lavandula stoechas subsp. luisieri	NepetoideaeLavandula	chloroplast	1	`ON641264.1`	Species evidence
Melissa officinalis	NepetoideaeMelissa	chloroplast	1	`NC_066033.1`	Species evidence
Mentha pulegium	NepetoideaeMentha	chloroplast	1	`NC_086489.1`	Species evidence
Mentha suaveolens	NepetoideaeMentha	chloroplast	1	`NC_086486.1`	Species evidence
Ocimum americanum	NepetoideaeOcimum	chloroplast	1	`NC_079695.1`	Species evidence
Ocimum basilicum var. purpurascens	NepetoideaeOcimum	chloroplast	1	`OR478166.1`	Species evidence
Ocimum x africanum	NepetoideaeOcimum	chloroplast	1	`NC_082140.1`	Species evidence
Origanum vulgare	NepetoideaeOriganum	chloroplast	1	`PQ468695.1`	Species evidence
Origanum vulgare subsp. virens	NepetoideaeOriganum	chloroplast	1	`ON641292.1`	Species evidence
Origanum vulgare subsp. vulgare	NepetoideaeOriganum	chloroplast	1	`ON641323.1`	Species evidence
Orthosiphon aristatus	NepetoideaeOrthosiphon	chloroplast	1	`NC_082580.1`	Species evidence
Phlomis fruticosa	LamioideaePhlomis	chloroplast	1	`NC_065868.1`	Species evidence
Phlomoides anisochila	LamioideaePhlomoides	chloroplast	1	`PV929680.1`	Species evidence
Phlomoides hamosa	LamioideaePhlomoides	chloroplast	1	`NC_061415.1`	Species evidence
Phlomoides isochila	LamioideaePhlomoides	chloroplast	1	`PX921649.1`	Species evidence
Phlomoides rotata	LamioideaePhlomoides	chloroplast	1	`NC_065733.1`	Species evidence
Phlomoides strigosa	LamioideaePhlomoides	chloroplast	1	`NC_070070.1`	Species evidence
Plectranthus barbatus	NepetoideaePlectranthus	chloroplast	1	`NC_066019.1`	Species evidence
Salvia insignis	NepetoideaeSalvia	chloroplast	1	`PV972776.1`	Species evidence
Salvia lilacinocoerulea	NepetoideaeSalvia	chloroplast	1	`PV991053.1`	Species evidence
Salvia multicaulis	NepetoideaeSalvia	chloroplast	1	`OR684571.1`	Species evidence
Satureja montana	NepetoideaeSatureja	chloroplast	1	`NC_066034.1`	Species evidence
Scutellaria cypria	ScutellarioideaeScutellaria	chloroplast	1	`OR178745.1`	Species evidence
Scutellaria likiangensis	ScutellarioideaeScutellaria	chloroplast	1	`NC_061416.1`	Species evidence
Thymbra capitata	NepetoideaeThymbra	chloroplast	1	`NC_086488.1`	Species evidence
Thymus mastichina	NepetoideaeThymus	chloroplast	1	`NC_086485.1`	Species evidence
Thymus villosus subsp. lusitanicus	NepetoideaeThymus	chloroplast	1	`ON641262.1`	Species evidence
Thymus vulgaris	NepetoideaeThymus	chloroplast	1	`NC_086487.1`	Species evidence

Coordinate-linked loci

Raw accession, coordinate range, strand and feature type remain visible. Duplicate copies within an assembly are not collapsed.

46 loci

Species	Organelle	Accession	Feature	Coordinates	Strand	Length
Ajuga bracteosa	Chloroplast	NC_068635.1	gene	58509–59063	1	—	Open map
Ajuga macrosperma	Chloroplast	NC_084166.1	gene	58519–59073	1	—	Open map
Ajuga turkestanica	Chloroplast	PV192927.1	gene	59007–59561	1	—	Open map
Ballota nigra	Chloroplast	NC_066022.1	gene	59604–60158	1	—	Open map
Callicarpa longifolia	Chloroplast	NC_084175.1	gene	61131–61685	1	—	Open map
Callicarpa sp XL-2023a	Chloroplast	OR263673.1	gene	61384–61938	1	—	Open map
Clerodendrum deflexum	Chloroplast	NC_084176.1	gene	59173–59727	1	—	Open map
Clinopodium menthifolium subsp. ascendens	Chloroplast	ON641271.1	gene	59419–59973	1	—	Open map
Coleus amboinicus	Chloroplast	PX923121.1	gene	59878–60432	1	—	Open map
Dracocephalum komarovii	Chloroplast	PX928789.1	gene	58749–59303	1	—	Open map
Dracocephalum officinale	Chloroplast	NC_066037.1	gene	57954–58508	1	—	Open map
Dracocephalum seravschanicum	Chloroplast	PX929666.1	gene	57937–58491	1	—	Open map
Glechoma cf hirsuta	Chloroplast	PP203124.1	gene	59311–59865	1	—	Open map
Glechoma hederacea	Chloroplast	PP203125.1	gene	59334–59888	1	—	Open map
Glechoma hirsuta	Chloroplast	PP203126.1	gene	59314–59868	1	—	Open map
Lagochilus inebrians	Chloroplast	PV192925.1	gene	58424–58978	1	—	Open map
Lavandula maroccana	Chloroplast	PX569468.1	gene	59697–60251	1	—	Open map
Lavandula pedunculata subsp. lusitanica	Chloroplast	ON641259.1	gene	59901–60455	1	—	Open map
Lavandula stoechas subsp. luisieri	Chloroplast	ON641264.1	gene	59921–60475	1	—	Open map
Melissa officinalis	Chloroplast	NC_066033.1	gene	59562–60116	1	—	Open map
Mentha pulegium	Chloroplast	NC_086489.1	gene	59684–60238	1	—	Open map
Mentha suaveolens	Chloroplast	NC_086486.1	gene	59306–59860	1	—	Open map
Ocimum americanum	Chloroplast	NC_079695.1	gene	59858–60412	1	—	Open map
Ocimum basilicum var. purpurascens	Chloroplast	OR478166.1	gene	59815–60369	1	—	Open map
Ocimum x africanum	Chloroplast	NC_082140.1	gene	59773–60327	1	—	Open map
Origanum vulgare	Chloroplast	PQ468695.1	gene	59463–60017	1	—	Open map
Origanum vulgare subsp. virens	Chloroplast	ON641292.1	gene	59464–60018	1	—	Open map
Origanum vulgare subsp. vulgare	Chloroplast	ON641323.1	gene	59454–60008	1	—	Open map
Orthosiphon aristatus	Chloroplast	NC_082580.1	gene	59744–60298	1	—	Open map
Phlomis fruticosa	Chloroplast	NC_065868.1	gene	85056–85610	1	—	Open map
Phlomoides anisochila	Chloroplast	PV929680.1	gene	59709–60263	1	—	Open map
Phlomoides hamosa	Chloroplast	NC_061415.1	gene	59621–60175	1	—	Open map
Phlomoides isochila	Chloroplast	PX921649.1	gene	59707–60261	1	—	Open map
Phlomoides rotata	Chloroplast	NC_065733.1	gene	84897–85451	1	—	Open map
Phlomoides strigosa	Chloroplast	NC_070070.1	gene	23386–23940	-1	—	Open map
Plectranthus barbatus	Chloroplast	NC_066019.1	gene	64835–65389	1	—	Open map
Salvia insignis	Chloroplast	PV972776.1	gene	59013–59567	1	—	Open map
Salvia lilacinocoerulea	Chloroplast	PV991053.1	gene	59185–59739	1	—	Open map
Salvia multicaulis	Chloroplast	OR684571.1	gene	59110–59664	1	—	Open map
Satureja montana	Chloroplast	NC_066034.1	gene	59368–59922	1	—	Open map
Scutellaria cypria	Chloroplast	OR178745.1	gene	60427–60981	1	—	Open map
Scutellaria likiangensis	Chloroplast	NC_061416.1	gene	60314–60868	1	—	Open map
Thymbra capitata	Chloroplast	NC_086488.1	gene	58950–59504	1	—	Open map
Thymus mastichina	Chloroplast	NC_086485.1	gene	59381–59935	1	—	Open map
Thymus villosus subsp. lusitanicus	Chloroplast	ON641262.1	gene	59476–60030	1	—	Open map
Thymus vulgaris	Chloroplast	NC_086487.1	gene	59303–59857	1	—	Open map

Publication-safe DNA records

Only nucleotide records are publicly exposed. Protein sequences are intentionally omitted.

0 DNA records

No public DNA sequence

This record may be supported by coordinate evidence without an exposed DNA sequence.

Accessions

Traceable identifiers associated with this gene evidence.