Coordinate-aware organelle record

Callicarpa americana chloroplast genome

Available NC_052696.1 154,433 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	597	1656	1059
matK	gene	other	−	2209	3733	1524
rps16	gene	ribosomal-protein	−	5358	6492	1134
trnQ-UUG	gene	translation-rna	−	7617	7689	72
psbK	gene	photosystem-ii	+	8013	8208	195
psbI	gene	photosystem-ii	+	8597	8708	111
trnS-GCU	gene	translation-rna	−	8825	8913	88
trnG-UCC	gene	translation-rna	+	9617	10378	761
trnR-UCU	gene	translation-rna	+	10554	10626	72
atpA	gene	atp-synthase	−	10730	12254	1524
atpF	gene	atp-synthase	−	12330	13578	1248
atpH	gene	atp-synthase	−	13944	14190	246
atpI	gene	atp-synthase	−	15204	15948	744
rps2	gene	ribosomal-protein	−	16179	16890	711
rpoC	gene	rna-polymerase	−	17110	21292	4182
rpoC1	gene	rna-polymerase	−	21446	24272	2826
rpoB	gene	rna-polymerase	−	24298	27511	3213
trnC-GCA	gene	translation-rna	+	28687	28758	71
petN	gene	cytochrome	+	29589	29679	90
psbM	gene	photosystem-ii	−	30589	30694	105
trnD-GUC	gene	translation-rna	−	31230	31304	74
trnY-GUA	gene	translation-rna	−	31412	31496	84
trnE-UUC	gene	translation-rna	−	31555	31628	73
trnT-GGU	gene	translation-rna	+	32182	32254	72
psbD	gene	photosystem-ii	+	33633	34695	1062
psbC	gene	photosystem-ii	+	34642	36064	1422
trnS-UGA	gene	translation-rna	−	36305	36398	93
psbZ	gene	photosystem-ii	+	36727	36916	189
trnG-GCC	gene	translation-rna	+	37193	37264	71
trnfM-CAU	gene	translation-rna	−	37415	37489	74
rps14	gene	ribosomal-protein	−	37638	37941	303
psaB	gene	photosystem-i	−	38063	40268	2205
psaA	gene	photosystem-i	−	40293	42546	2253
ycf3	gene	other	−	43261	45216	1955
trnS-GGA	gene	translation-rna	+	46042	46129	87
rps4	gene	ribosomal-protein	−	46409	47015	606
trnT-UGU	gene	translation-rna	−	47381	47454	73
trnL-UAA	gene	translation-rna	+	48124	48702	578
trnF-GAA	gene	translation-rna	+	49038	49111	73
ndhJ	gene	nad-dehydrogenase	−	49759	50236	477
ndhK	gene	nad-dehydrogenase	−	50336	51014	678
ndhC	gene	nad-dehydrogenase	−	51067	51430	363
trnV-UAC	gene	translation-rna	−	52615	53268	653
trnM-CAU	gene	translation-rna	+	53449	53522	73
atpE	gene	atp-synthase	−	53729	54131	402
atpB	gene	atp-synthase	−	54127	55624	1497
rbcL	gene	other	+	56409	57849	1440
accD	gene	other	+	58483	60028	1545
psaI	gene	photosystem-i	+	60743	60854	111
ycf4	gene	other	+	61292	61847	555
cemA	gene	other	+	62494	63184	690
petA	gene	cytochrome	+	63373	64336	963
psbJ	gene	photosystem-ii	−	65373	65496	123
psbL	gene	photosystem-ii	−	65629	65746	117
psbF	gene	photosystem-ii	−	65769	65889	120
psbE	gene	photosystem-ii	−	65903	66155	252
petL	gene	cytochrome	+	67077	67173	96
petG	gene	cytochrome	+	67348	67462	114
trnW-CCA	gene	translation-rna	−	67584	67658	74
trnP-UGG	gene	translation-rna	−	67820	67894	74
psaJ	gene	photosystem-i	+	68285	68420	135
rpl33	gene	ribosomal-protein	+	68899	69100	201
rps18	gene	ribosomal-protein	+	69270	69576	306
rpl20	gene	ribosomal-protein	−	69815	70202	387
rps12	gene	ribosomal-protein	−	71021	99293	28272
rps12	gene	ribosomal-protein	+	71021	141123	70102
clpP	gene	other	−	71267	73215	1948
psbB	gene	photosystem-ii	+	73676	75203	1527
psbT	gene	photosystem-ii	+	75393	75501	108
psbN	gene	photosystem-ii	−	75561	75693	132
psbH	gene	photosystem-ii	+	75780	76020	240
petB	gene	cytochrome	+	76144	77527	1383
petD	gene	cytochrome	+	77715	78933	1218
rpoA	gene	rna-polymerase	−	79109	80123	1014
rps11	gene	ribosomal-protein	−	80194	80611	417
rpl36	gene	ribosomal-protein	−	80712	80826	114
infA	gene	other	−	80921	81155	234
rps8	gene	ribosomal-protein	−	81279	81684	405
rpl14	gene	ribosomal-protein	−	81855	82224	369
rpl16	gene	ribosomal-protein	−	82344	83639	1295
rps3	gene	ribosomal-protein	−	83781	84444	663
rpl22	gene	ribosomal-protein	−	84453	84891	438
rps19	gene	ribosomal-protein	−	84950	85229	279
rpl2	gene	ribosomal-protein	−	85284	86776	1492
rpl23	gene	ribosomal-protein	−	86794	87076	282
trnI-CAU	gene	translation-rna	−	87241	87315	74
ycf2	gene	other	+	87413	94274	6861
ycf15	gene	other	+	94406	94604	198
trnL-CAA	gene	translation-rna	−	94864	94945	81
ndhB	gene	nad-dehydrogenase	−	95492	97704	2212
rps7	gene	ribosomal-protein	−	97978	98446	468
trnV-GAC	gene	translation-rna	+	100898	100970	72
rrn16	gene	ribosomal-rna	+	101215	102706	1491
trnI-GAU	gene	translation-rna	+	103004	104025	1021
trnA-UGC	gene	translation-rna	+	104089	104974	885
23S rRNA	gene	other	+	105142	107953	2811
rrn4.5	gene	ribosomal-rna	+	108050	108153	103
rrn5	gene	ribosomal-rna	+	108408	108529	121
trnR-ACG	gene	translation-rna	+	108772	108846	74
trnN-GUU	gene	translation-rna	−	109417	109489	72
ndhF	gene	nad-dehydrogenase	−	110893	113137	2244
rpl32	gene	ribosomal-protein	+	113656	113833	177
trnL	gene	translation-rna	+	114638	114718	80
ccsA	gene	other	+	114802	115774	972
ndhD	gene	nad-dehydrogenase	−	116025	117528	1503
psaC	gene	photosystem-i	−	117647	117893	246
ndhE	gene	nad-dehydrogenase	−	118143	118449	306
ndhG	gene	nad-dehydrogenase	−	118662	119193	531
ndhI	gene	nad-dehydrogenase	−	119542	120049	507
ndhA	gene	nad-dehydrogenase	−	120124	122309	2185
ndhH	gene	nad-dehydrogenase	−	122310	123492	1182
rps15	gene	ribosomal-protein	−	123588	123861	273
ycf1	gene	other	−	124242	129915	5673
trnN-GUU	gene	translation-rna	+	130133	130205	72
trnR-ACG	gene	translation-rna	−	130776	130850	74
rrn5	gene	ribosomal-rna	−	131093	131214	121
rrn4.5	gene	ribosomal-rna	−	131469	131572	103
rrn23	gene	ribosomal-rna	−	131669	134480	2811
trnA-UGC	gene	translation-rna	−	134648	135533	885
trnI-GAU	gene	translation-rna	−	135597	136618	1021
rrn16	gene	ribosomal-rna	−	136916	138407	1491
trnV-GAC	gene	translation-rna	−	138652	138724	72
rps7	gene	ribosomal-protein	+	141176	141644	468
ndhB	gene	nad-dehydrogenase	+	141918	144130	2212
trnL-CAA	gene	translation-rna	+	144677	144758	81
ycf15	gene	other	−	145018	145216	198
ycf2	gene	other	−	145348	152209	6861
trnI-CAU	gene	translation-rna	+	152307	152381	74
rpl23	gene	ribosomal-protein	+	152546	152828	282
rpl2	gene	ribosomal-protein	+	152846	154338	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_052696.1DNA · accDNC_052696DNA · atpBNC_052696DNA · matKNC_052696DNA · ndhFNC_052696DNA · psbANC_052696DNA · rbcLNC_052696DNA · rps12NC_052696DNA · ycf1NC_052696