Coordinate-aware organelle record

Callicarpa longifolia chloroplast genome

Available NC_084175.1 154,203 bp 129 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	435	1494	1059
trnK-UUU	gene	translation-rna	−	1748	4320	2572
matK	gene	other	−	2054	3578	1524
rps16	gene	ribosomal-protein	−	5180	6314	1134
trnQ-UUG	gene	translation-rna	−	7456	7528	72
psbK	gene	photosystem-ii	+	7861	8047	186
psbI	gene	photosystem-ii	+	8436	8547	111
trnS-GCU	gene	translation-rna	−	8664	8752	88
trnG-UCC	gene	translation-rna	+	9459	10219	760
trnR-UCU	gene	translation-rna	−	10396	10468	72
atpA	gene	atp-synthase	−	10572	12096	1524
atpF	gene	atp-synthase	−	12163	13411	1248
atpH	gene	atp-synthase	−	13778	14024	246
atpI	gene	atp-synthase	−	15039	15783	744
rps2	gene	ribosomal-protein	−	16013	16724	711
rpoC2	gene	rna-polymerase	−	16939	21109	4170
rpoC1	gene	rna-polymerase	−	21275	24101	2826
rpoB	gene	rna-polymerase	−	24127	27340	3213
trnC-GCA	gene	translation-rna	+	28515	28586	71
petN	gene	cytochrome	+	29417	29507	90
psbM	gene	photosystem-ii	−	30417	30522	105
trnD-GUC	gene	translation-rna	−	31043	31117	74
trnY-GUA	gene	translation-rna	−	31225	31309	84
trnE-UUC	gene	translation-rna	−	31368	31441	73
trnT-GGU	gene	translation-rna	+	31997	32069	72
psbD	gene	photosystem-ii	+	33448	34510	1062
psbC	gene	photosystem-ii	+	34493	35879	1386
trnS-UGA	gene	translation-rna	−	36120	36213	93
psbZ	gene	photosystem-ii	+	36542	36731	189
trnG-GCC	gene	translation-rna	+	37006	37077	71
rps14	gene	ribosomal-protein	−	37451	37754	303
psaB	gene	photosystem-i	−	37876	40081	2205
psaA	gene	photosystem-i	−	40106	42359	2253
pafI	gene	other	−	43072	45027	1955
trnS-GGA	gene	translation-rna	+	45862	45949	87
rps4	gene	ribosomal-protein	−	46229	46835	606
trnT-UGU	gene	translation-rna	−	47201	47274	73
trnL-UAA	gene	translation-rna	+	47971	48544	573
trnF-GAA	gene	translation-rna	+	48885	48958	73
ndhJ	gene	nad-dehydrogenase	−	49605	50082	477
ndhK	gene	nad-dehydrogenase	−	50182	50923	741
ndhC	gene	nad-dehydrogenase	−	50913	51276	363
trnV-UAC	gene	translation-rna	−	52466	53119	653
trnM-CAU	gene	translation-rna	+	53300	53373	73
atpE	gene	atp-synthase	−	53580	53982	402
atpB	gene	atp-synthase	−	53978	55475	1497
rbcL	gene	other	+	56260	57700	1440
accD	gene	other	+	58386	59880	1494
psaI	gene	photosystem-i	+	60581	60692	111
pafII	gene	other	+	61130	61685	555
cemA	gene	other	+	62332	63022	690
petA	gene	cytochrome	+	63211	64174	963
psbJ	gene	photosystem-ii	−	65110	65233	123
psbL	gene	photosystem-ii	−	65366	65483	117
psbF	gene	photosystem-ii	−	65506	65626	120
psbE	gene	photosystem-ii	−	65640	65892	252
petL	gene	cytochrome	+	66822	66918	96
petG	gene	cytochrome	+	67092	67206	114
trnW-CCA	gene	translation-rna	−	67328	67402	74
trnP-UGG	gene	translation-rna	−	67564	67638	74
psaJ	gene	photosystem-i	+	68029	68164	135
rpl33	gene	ribosomal-protein	+	68643	68844	201
rps18	gene	ribosomal-protein	+	69014	69320	306
rpl20	gene	ribosomal-protein	−	69555	69942	387
rps12	gene	ribosomal-protein	−	70762	99037	28275
rps12	gene	ribosomal-protein	+	70762	140893	70131
clpP1	gene	other	−	71006	72954	1948
psbB	gene	photosystem-ii	+	73415	74942	1527
psbT	gene	photosystem-ii	+	75134	75242	108
pbf1	gene	other	−	75302	75434	132
psbH	gene	photosystem-ii	+	75539	75761	222
petB	gene	cytochrome	+	75885	77263	1378
petD	gene	cytochrome	+	77451	78668	1217
rpoA	gene	rna-polymerase	−	78844	79858	1014
rps11	gene	ribosomal-protein	−	79929	80346	417
rpl36	gene	ribosomal-protein	−	80447	80561	114
infA	gene	other	−	80656	80890	234
rps8	gene	ribosomal-protein	−	81014	81419	405
rpl14	gene	ribosomal-protein	−	81591	81960	369
rpl16	gene	ribosomal-protein	−	82086	83383	1297
rps3	gene	ribosomal-protein	−	83525	84188	663
rpl22	gene	ribosomal-protein	−	84197	84635	438
rps19	gene	ribosomal-protein	−	84694	84973	279
rpl2	gene	ribosomal-protein	−	85028	86520	1492
rpl23	gene	ribosomal-protein	−	86538	86820	282
trnI-CAU	gene	translation-rna	−	86985	87059	74
ycf2	gene	other	+	87157	94018	6861
trnL-CAA	gene	translation-rna	−	94608	94689	81
ndhB	gene	nad-dehydrogenase	−	95236	97448	2212
rps7	gene	ribosomal-protein	−	97722	98190	468
trnV-GAC	gene	translation-rna	+	100643	100715	72
rrn16	gene	ribosomal-rna	+	100960	102451	1491
trnI-GAU	gene	translation-rna	+	102749	103770	1021
trnA-UGC	gene	translation-rna	+	103834	104720	886
rrn4.5	gene	ribosomal-rna	+	107796	107899	103
rrn5	gene	ribosomal-rna	+	108154	108275	121
trnR-ACG	gene	translation-rna	+	108518	108592	74
trnN-GUU	gene	translation-rna	−	109161	109233	72
ycf1	gene	other	+	109562	110648	1086
ndhF	gene	nad-dehydrogenase	−	110650	112894	2244
rpl32	gene	ribosomal-protein	+	113413	113590	177
trnL-UAG	gene	translation-rna	+	114372	114452	80
ccsA	gene	other	+	114535	115507	972
ndhD	gene	nad-dehydrogenase	−	115773	117276	1503
psaC	gene	photosystem-i	−	117396	117642	246
ndhE	gene	nad-dehydrogenase	−	117892	118198	306
ndhG	gene	nad-dehydrogenase	−	118411	118942	531
ndhI	gene	nad-dehydrogenase	−	119290	119797	507
ndhA	gene	nad-dehydrogenase	−	119872	122049	2177
ndhH	gene	nad-dehydrogenase	−	122050	123232	1182
rps15	gene	ribosomal-protein	−	123328	123601	273
ycf1	gene	other	−	123982	129574	5592
trnN-GUU	gene	translation-rna	+	129903	129975	72
trnR-ACG	gene	translation-rna	−	130544	130618	74
rrn5	gene	ribosomal-rna	−	130861	130982	121
rrn4.5	gene	ribosomal-rna	−	131237	131340	103
rrn23	gene	ribosomal-rna	−	131437	134248	2811
trnA-UGC	gene	translation-rna	−	134416	135302	886
trnI-GAU	gene	translation-rna	−	135366	136387	1021
rrn16	gene	ribosomal-rna	−	136685	138176	1491
trnV-GAC	gene	translation-rna	−	138421	138493	72
rps7	gene	ribosomal-protein	+	140946	141414	468
ndhB	gene	nad-dehydrogenase	+	141688	143900	2212
trnL-CAA	gene	translation-rna	+	144447	144528	81
ycf2	gene	other	−	145118	151979	6861
trnI-CAU	gene	translation-rna	+	152077	152151	74
rpl23	gene	ribosomal-protein	+	152316	152598	282
rpl2	gene	ribosomal-protein	+	152616	154108	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_084175.1DNA · accDNC_084175DNA · atpBNC_084175DNA · matKNC_084175DNA · ndhFNC_084175DNA · psbANC_084175DNA · rbcLNC_084175DNA · rps12NC_084175DNA · ycf1NC_084175