Coordinate-aware organelle record

Callicarpa longissima chloroplast genome

Available NC_088747.1 154,158 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	439	1498	1059
trnK-UUU	gene	translation-rna	−	1750	4323	2573
matK	gene	other	−	2057	3581	1524
rps16	gene	ribosomal-protein	−	5186	6320	1134
trnQ-UUG	gene	translation-rna	−	7461	7533	72
psbK	gene	photosystem-ii	+	7866	8052	186
psbI	gene	photosystem-ii	+	8441	8552	111
trnS-GCU	gene	translation-rna	−	8669	8757	88
trnS-CGA	gene	translation-rna	+	9464	10226	762
trnR-UCU	gene	translation-rna	+	10402	10474	72
atpA	gene	atp-synthase	−	10578	12102	1524
atpF	gene	atp-synthase	−	12169	13416	1247
atpH	gene	atp-synthase	−	13784	14030	246
atpI	gene	atp-synthase	−	15045	15789	744
rps2	gene	ribosomal-protein	−	16019	16730	711
rpoC2	gene	rna-polymerase	−	16946	21128	4182
rpoC1	gene	rna-polymerase	−	21282	24108	2826
rpoB	gene	rna-polymerase	−	24134	27347	3213
trnC-GCA	gene	translation-rna	+	28522	28593	71
petN	gene	cytochrome	+	29424	29514	90
psbM	gene	photosystem-ii	−	30413	30518	105
trnD-GUC	gene	translation-rna	−	31054	31128	74
trnY-GUA	gene	translation-rna	−	31236	31320	84
trnE-UUC	gene	translation-rna	−	31379	31452	73
trnT-GGU	gene	translation-rna	+	32008	32080	72
psbD	gene	photosystem-ii	+	33459	34521	1062
psbC	gene	photosystem-ii	+	34468	35890	1422
trnS-UGA	gene	translation-rna	−	36131	36224	93
psbZ	gene	photosystem-ii	+	36553	36742	189
trnG-GCC	gene	translation-rna	+	37017	37088	71
trnM-CAU	gene	translation-rna	−	37239	37313	74
rps14	gene	ribosomal-protein	−	37462	37765	303
psaB	gene	photosystem-i	−	37889	40094	2205
psaA	gene	photosystem-i	−	40119	42372	2253
ycf3	gene	other	−	43086	45040	1954
trnS-GGA	gene	translation-rna	+	45874	45961	87
rps4	gene	ribosomal-protein	−	46241	46847	606
trnT-UGU	gene	translation-rna	−	47217	47290	73
trnL-UAA	gene	translation-rna	+	47962	48535	573
trnF-GAA	gene	translation-rna	+	48876	48949	73
ndhJ	gene	nad-dehydrogenase	−	49598	50075	477
ndhK	gene	nad-dehydrogenase	−	50175	50853	678
ndhC	gene	nad-dehydrogenase	−	50906	51269	363
trnM-CAU	gene	translation-rna	+	53286	53359	73
atpE	gene	atp-synthase	−	53566	53968	402
atpB	gene	atp-synthase	−	53964	55461	1497
rbcL	gene	other	+	56246	57686	1440
accD	gene	other	+	58371	59865	1494
psaI	gene	photosystem-i	+	60566	60677	111
ycf4	gene	other	+	61115	61670	555
cemA	gene	other	+	62317	63007	690
petA	gene	cytochrome	+	63196	64159	963
psbJ	gene	photosystem-ii	−	65095	65218	123
psbL	gene	photosystem-ii	−	65351	65468	117
psbF	gene	photosystem-ii	−	65491	65611	120
psbE	gene	photosystem-ii	−	65625	65877	252
petL	gene	cytochrome	+	66807	66903	96
petG	gene	cytochrome	+	67078	67192	114
trnW-CCA	gene	translation-rna	−	67314	67388	74
trnP-UGG	gene	translation-rna	−	67550	67624	74
psaJ	gene	photosystem-i	+	68015	68150	135
rpl33	gene	ribosomal-protein	+	68629	68830	201
rps18	gene	ribosomal-protein	+	69000	69306	306
rpl20	gene	ribosomal-protein	−	69541	69928	387
rps12	gene	ribosomal-protein	−	70747	99021	28274
rps12	gene	ribosomal-protein	+	70747	140848	70101
clpP	gene	other	−	70993	72941	1948
psbB	gene	photosystem-ii	+	73402	74929	1527
psbT	gene	photosystem-ii	+	75121	75229	108
psbN	gene	photosystem-ii	−	75289	75421	132
psbH	gene	photosystem-ii	+	75526	75748	222
petB	gene	cytochrome	+	75872	77249	1377
petD	gene	cytochrome	+	77437	78654	1217
rpoA	gene	rna-polymerase	−	78830	79844	1014
rps11	gene	ribosomal-protein	−	79915	80332	417
rpl36	gene	ribosomal-protein	−	80433	80547	114
infA	gene	other	−	80642	80876	234
rps8	gene	ribosomal-protein	−	81000	81405	405
rpl14	gene	ribosomal-protein	−	81576	81945	369
rpl16	gene	ribosomal-protein	−	82071	83367	1296
rps3	gene	ribosomal-protein	−	83509	84172	663
rpl22	gene	ribosomal-protein	−	84181	84619	438
rps19	gene	ribosomal-protein	−	84678	84957	279
rpl2	gene	ribosomal-protein	−	85012	86504	1492
rpl23	gene	ribosomal-protein	−	86522	86804	282
trnM-CAU	gene	translation-rna	−	86969	87043	74
ycf2	gene	other	+	87141	94002	6861
ycf15	gene	other	+	94134	94332	198
trnL-CAA	gene	translation-rna	−	94592	94673	81
ndhB	gene	nad-dehydrogenase	−	95220	97432	2212
rps7	gene	ribosomal-protein	−	97706	98174	468
trnV-GAC	gene	translation-rna	+	100627	100699	72
rrn16S	gene	ribosomal-rna	+	100944	102435	1491
trnE-UUC	gene	translation-rna	+	102733	103754	1021
trnA-UGC	gene	translation-rna	+	103818	104704	886
rrn23S	gene	ribosomal-rna	+	104872	107683	2811
rrn4.5S	gene	ribosomal-rna	+	107780	107883	103
rrn5S	gene	ribosomal-rna	+	108138	108259	121
trnR-ACG	gene	translation-rna	+	108502	108576	74
trnN-GUU	gene	translation-rna	−	109145	109217	72
ndhF	gene	nad-dehydrogenase	−	110621	112865	2244
rpl32	gene	ribosomal-protein	+	113384	113561	177
trnL-UAG	gene	translation-rna	+	114344	114424	80
ccsA	gene	other	+	114508	115480	972
ndhD	gene	nad-dehydrogenase	−	115746	117246	1500
psaC	gene	photosystem-i	−	117369	117615	246
ndhE	gene	nad-dehydrogenase	−	117865	118171	306
ndhG	gene	nad-dehydrogenase	−	118384	118915	531
ndhI	gene	nad-dehydrogenase	−	119263	119770	507
ndhA	gene	nad-dehydrogenase	−	119845	122031	2186
ndhH	gene	nad-dehydrogenase	−	122032	123214	1182
rps15	gene	ribosomal-protein	−	123310	123583	273
ycf1	gene	other	−	123964	129529	5565
trnN-GUU	gene	translation-rna	+	129858	129930	72
trnR-ACG	gene	translation-rna	−	130499	130573	74
rrn5S	gene	ribosomal-rna	−	130816	130937	121
rrn4.5S	gene	ribosomal-rna	−	131192	131295	103
rrn23S	gene	ribosomal-rna	−	131392	134203	2811
trnA-UGC	gene	translation-rna	−	134371	135257	886
trnE-UUC	gene	translation-rna	−	135321	136342	1021
rrn16S	gene	ribosomal-rna	−	136640	138131	1491
trnV-GAC	gene	translation-rna	−	138376	138448	72
rps7	gene	ribosomal-protein	+	140901	141369	468
ndhB	gene	nad-dehydrogenase	+	141643	143855	2212
trnL-CAA	gene	translation-rna	+	144402	144483	81
ycf15	gene	other	−	144743	144941	198
ycf2	gene	other	−	145073	151934	6861
trnM-CAU	gene	translation-rna	+	152032	152106	74
rpl23	gene	ribosomal-protein	+	152271	152553	282
rpl2	gene	ribosomal-protein	+	152571	154063	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_088747.1DNA · accDNC_088747DNA · atpBNC_088747DNA · matKNC_088747DNA · ndhFNC_088747DNA · psbANC_088747DNA · rbcLNC_088747DNA · rps12NC_088747DNA · ycf1NC_088747