Coordinate-aware organelle record

Caryopteris mongholica chloroplast genome

Available NC_035729.1 151,707 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	21	95	74
psbA	gene	photosystem-ii	−	317	1376	1059
trnK-UUU	gene	translation-rna	−	1608	4185	2577
matK	gene	other	−	1909	3445	1536
rps16	gene	ribosomal-protein	−	5050	6241	1191
trnQ-UUG	gene	translation-rna	−	7452	7524	72
psbK	gene	photosystem-ii	+	7853	8039	186
psbI	gene	photosystem-ii	+	8251	8362	111
trnS-GCU	gene	translation-rna	−	8482	8570	88
trnG-UCC	gene	translation-rna	+	9220	9980	760
trnR-UCU	gene	translation-rna	+	10117	10189	72
atpA	gene	atp-synthase	−	10297	11821	1524
atpF	gene	atp-synthase	−	11922	13158	1236
atpH	gene	atp-synthase	−	13533	13779	246
atpI	gene	atp-synthase	−	14790	15534	744
rps2	gene	ribosomal-protein	−	15767	16478	711
rpoC2	gene	rna-polymerase	−	16697	20807	4110
rpoC1	gene	rna-polymerase	−	20973	23796	2823
rpoB	gene	rna-polymerase	−	23822	27035	3213
trnC-GCA	gene	translation-rna	+	28187	28258	71
petN	gene	cytochrome	+	28991	29081	90
psbM	gene	photosystem-ii	−	29724	29829	105
trnD-GUC	gene	translation-rna	−	30352	30426	74
trnY-GUA	gene	translation-rna	−	30533	30617	84
trnE-UUC	gene	translation-rna	−	30676	30749	73
trnT-GGU	gene	translation-rna	+	31287	31359	72
psbD	gene	photosystem-ii	+	32686	33748	1062
psbC	gene	photosystem-ii	+	33695	35117	1422
trnS-UGA	gene	translation-rna	−	35370	35463	93
psbZ	gene	photosystem-ii	+	35782	35971	189
trnG-GCC	gene	translation-rna	+	36241	36312	71
trnfM-CAU	gene	translation-rna	−	36482	36556	74
rps14	gene	ribosomal-protein	−	36700	37003	303
psaB	gene	photosystem-i	−	37128	39333	2205
psaA	gene	photosystem-i	−	39358	41611	2253
ycf3	gene	other	−	42348	44287	1939
trnS-GGA	gene	translation-rna	+	44761	44848	87
rps4	gene	ribosomal-protein	−	45149	45752	603
trnT-UGU	gene	translation-rna	−	46113	46186	73
trnL-UAA	gene	translation-rna	+	46887	47459	572
trnF-GAA	gene	translation-rna	+	47753	47826	73
ndhJ	gene	nad-dehydrogenase	−	48485	48962	477
ndhK	gene	nad-dehydrogenase	−	49062	49740	678
ndhC	gene	nad-dehydrogenase	−	49793	50156	363
trnV-UAC	gene	translation-rna	−	51018	51683	665
trnM-CAU	gene	translation-rna	+	51863	51936	73
atpE	gene	atp-synthase	−	52061	52484	423
atpB	gene	atp-synthase	−	52480	53977	1497
rbcL	gene	other	+	54737	56186	1449
accD	gene	other	+	56791	58330	1539
psaI	gene	photosystem-i	+	59042	59153	111
ycf4	gene	other	+	59562	60117	555
cemA	gene	other	+	60762	61452	690
petA	gene	cytochrome	+	61664	62627	963
psbJ	gene	photosystem-ii	−	63584	63707	123
psbL	gene	photosystem-ii	−	63848	63965	117
psbF	gene	photosystem-ii	−	63988	64108	120
psbE	gene	photosystem-ii	−	64122	64374	252
petL	gene	cytochrome	+	65278	65374	96
petG	gene	cytochrome	+	65548	65662	114
trnW-CCA	gene	translation-rna	−	65784	65858	74
trnP-UGG	gene	translation-rna	−	66027	66101	74
psaJ	gene	photosystem-i	+	66389	66524	135
rpl33	gene	ribosomal-protein	+	66987	67188	201
rps18	gene	ribosomal-protein	+	67353	67659	306
rpl20	gene	ribosomal-protein	−	67895	68282	387
rps12	gene	ribosomal-protein	−	69097	97295	28198
rps12	gene	ribosomal-protein	+	69097	138412	69315
clpP	gene	other	−	69347	71269	1922
psbB	gene	photosystem-ii	+	71714	73241	1527
psbT	gene	photosystem-ii	+	73435	73543	108
psbN	gene	photosystem-ii	−	73603	73735	132
psbH	gene	photosystem-ii	+	73840	74062	222
petB	gene	cytochrome	+	74182	75542	1360
petD	gene	cytochrome	+	75730	76946	1216
rpoA	gene	rna-polymerase	−	77122	78142	1020
rps11	gene	ribosomal-protein	−	78213	78630	417
rpl36	gene	ribosomal-protein	−	78732	78846	114
infA	gene	other	−	78941	79175	234
rps8	gene	ribosomal-protein	−	79299	79704	405
rpl14	gene	ribosomal-protein	−	79879	80248	369
rpl16	gene	ribosomal-protein	−	80374	81652	1278
rps3	gene	ribosomal-protein	−	81809	82460	651
rpl22	gene	ribosomal-protein	−	82444	82912	468
rps19	gene	ribosomal-protein	−	82967	83246	279
rpl2	gene	ribosomal-protein	−	83299	84791	1492
rpl23	gene	ribosomal-protein	−	84809	85091	282
trnI-CAU	gene	translation-rna	−	85256	85330	74
ycf2	gene	other	+	85418	92258	6840
ycf15	gene	other	+	92348	92597	249
trnL-CAA	gene	translation-rna	−	92864	92945	81
ndhB	gene	nad-dehydrogenase	−	93491	95703	2212
rps7	gene	ribosomal-protein	−	95977	96445	468
trnV-GAC	gene	translation-rna	+	98893	98965	72
rrn16	gene	ribosomal-rna	+	99192	100682	1490
trnI-GAU	gene	translation-rna	+	100981	102003	1022
trnA-UGC	gene	translation-rna	+	102067	102948	881
rrn23S	gene	ribosomal-rna	+	103109	105925	2816
rrn4.5S	gene	ribosomal-rna	+	106026	106129	103
rrn5S	gene	ribosomal-rna	+	106358	106479	121
trnR-ACG	gene	translation-rna	+	106723	106797	74
trnN-GUU	gene	translation-rna	−	107351	107423	72
ycf1	gene	other	+	107764	108844	1080
ndhF	gene	nad-dehydrogenase	−	108803	111047	2244
rpl32	gene	ribosomal-protein	+	111591	111768	177
trnL-UAG	gene	translation-rna	+	112180	112260	80
ccsA	gene	other	+	112348	113320	972
psaC	gene	photosystem-i	−	115189	115435	246
ndhE	gene	nad-dehydrogenase	−	115685	115991	306
ndhG	gene	nad-dehydrogenase	−	116192	116723	531
ndhI	gene	nad-dehydrogenase	−	117049	117556	507
ndhA	gene	nad-dehydrogenase	−	117631	119639	2008
ndhH	gene	nad-dehydrogenase	−	119640	120822	1182
rps15	gene	ribosomal-protein	−	120918	121191	273
ycf1	gene	other	−	121578	127146	5568
trnN-GUU	gene	translation-rna	+	127487	127559	72
trnR-ACG	gene	translation-rna	−	128113	128187	74
rrn5S	gene	ribosomal-rna	−	128431	128552	121
rrn4.5S	gene	ribosomal-rna	−	128781	128884	103
rrn23S	gene	ribosomal-rna	−	128883	131801	2918
trnA-UGC	gene	translation-rna	−	131962	132843	881
trnI-GAU	gene	translation-rna	−	132907	133929	1022
rrn16	gene	ribosomal-rna	−	134228	135718	1490
trnV-GAC	gene	translation-rna	−	135945	136017	72
rps7	gene	ribosomal-protein	+	138465	138933	468
ndhB	gene	nad-dehydrogenase	+	139207	141419	2212
trnL-CAA	gene	translation-rna	+	141965	142046	81
ycf15	gene	other	−	142313	142562	249
ycf2	gene	other	−	142652	149492	6840
trnI-CAU	gene	translation-rna	+	149580	149654	74
rpl23	gene	ribosomal-protein	+	149819	150101	282
rpl2	gene	ribosomal-protein	+	150119	151611	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_035729.1DNA · accDNC_035729DNA · atpBNC_035729DNA · matKNC_035729DNA · ndhFNC_035729DNA · psbANC_035729DNA · rbcLNC_035729DNA · rps12NC_035729DNA · ycf1NC_035729