Coordinate-aware organelle record

Caryopteris tangutica chloroplast genome

Available NC_069833.1 151,728 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	297	1356	1059
trnK-UUU	gene	translation-rna	−	1588	4172	2584
matK	gene	other	−	1896	3432	1536
rps16	gene	ribosomal-protein	−	5036	6225	1189
trnQ-UUG	gene	translation-rna	−	7376	7448	72
psbK	gene	photosystem-ii	+	7777	7963	186
psbI	gene	photosystem-ii	+	8174	8285	111
trnS-GCU	gene	translation-rna	−	8405	8493	88
trnG-UCC	gene	translation-rna	+	9143	9903	760
trnR-UCU	gene	translation-rna	+	10040	10112	72
atpA	gene	atp-synthase	−	10220	11744	1524
atpF	gene	atp-synthase	−	11845	13080	1235
atpH	gene	atp-synthase	−	13455	13701	246
atpI	gene	atp-synthase	−	14731	15475	744
rps2	gene	ribosomal-protein	−	15709	16420	711
rpoC2	gene	rna-polymerase	−	16642	20752	4110
rpoC1	gene	rna-polymerase	−	20918	23746	2828
rpoB	gene	rna-polymerase	−	23772	26985	3213
trnC-GCA	gene	translation-rna	+	28137	28208	71
petN	gene	cytochrome	+	28941	29031	90
psbM	gene	photosystem-ii	−	29674	29779	105
trnD-GUC	gene	translation-rna	−	30302	30376	74
trnY-GUA	gene	translation-rna	−	30483	30567	84
trnE-UUC	gene	translation-rna	−	30626	30699	73
trnT-GGU	gene	translation-rna	+	31237	31309	72
psbD	gene	photosystem-ii	+	32636	33698	1062
psbC	gene	photosystem-ii	+	33645	35067	1422
trnS-UGA	gene	translation-rna	−	35320	35413	93
psbZ	gene	photosystem-ii	+	35732	35921	189
trnG-GCC	gene	translation-rna	+	36189	36260	71
trnfM-CAU	gene	translation-rna	−	36430	36504	74
rps14	gene	ribosomal-protein	−	36648	36951	303
psaB	gene	photosystem-i	−	37074	39279	2205
psaA	gene	photosystem-i	−	39304	41557	2253
ycf3	gene	other	−	42294	44233	1939
trnS-GGA	gene	translation-rna	+	44715	44802	87
rps4	gene	ribosomal-protein	−	45103	45706	603
trnT-UGU	gene	translation-rna	−	46067	46140	73
trnL-UAA	gene	translation-rna	+	46841	47413	572
trnF-GAA	gene	translation-rna	+	47707	47780	73
ndhJ	gene	nad-dehydrogenase	−	48466	48943	477
ndhK	gene	nad-dehydrogenase	−	49043	49721	678
ndhC	gene	nad-dehydrogenase	−	49774	50137	363
trnV-UAC	gene	translation-rna	−	50999	51664	665
trnM-CAU	gene	translation-rna	+	51844	51917	73
atpE	gene	atp-synthase	−	52042	52465	423
atpB	gene	atp-synthase	−	52461	53958	1497
rbcL	gene	other	+	54753	56202	1449
accD	gene	other	+	56807	58346	1539
psaI	gene	photosystem-i	+	59058	59169	111
ycf4	gene	other	+	59579	60134	555
cemA	gene	other	+	60779	61469	690
petA	gene	cytochrome	+	61681	62644	963
psbJ	gene	photosystem-ii	−	63600	63723	123
psbL	gene	photosystem-ii	−	63864	63981	117
psbF	gene	photosystem-ii	−	64004	64124	120
psbE	gene	photosystem-ii	−	64138	64390	252
petL	gene	cytochrome	+	65294	65390	96
petG	gene	cytochrome	+	65564	65678	114
trnW-CCA	gene	translation-rna	−	65800	65874	74
trnP-UGG	gene	translation-rna	−	66043	66117	74
psaJ	gene	photosystem-i	+	66405	66540	135
rpl33	gene	ribosomal-protein	+	67003	67204	201
rps18	gene	ribosomal-protein	+	67369	67675	306
rpl20	gene	ribosomal-protein	−	67911	68298	387
rps12	gene	ribosomal-protein	−	69104	97313	28209
rps12	gene	ribosomal-protein	+	69104	138434	69330
clpP	gene	other	−	69365	71286	1921
psbB	gene	photosystem-ii	+	71731	73258	1527
psbT	gene	photosystem-ii	+	73452	73560	108
psbN	gene	photosystem-ii	−	73620	73752	132
psbH	gene	photosystem-ii	+	73857	74079	222
petB	gene	cytochrome	+	74199	75560	1361
petD	gene	cytochrome	+	75748	76964	1216
rpoA	gene	rna-polymerase	−	77140	78160	1020
rps11	gene	ribosomal-protein	−	78231	78648	417
rpl36	gene	ribosomal-protein	−	78750	78864	114
infA	gene	other	−	78959	79193	234
rps8	gene	ribosomal-protein	−	79317	79722	405
rpl14	gene	ribosomal-protein	−	79897	80266	369
rpl16	gene	ribosomal-protein	−	80392	81670	1278
rps3	gene	ribosomal-protein	−	81827	82478	651
rpl22	gene	ribosomal-protein	−	82462	82930	468
rps19	gene	ribosomal-protein	−	82985	83264	279
rpl2	gene	ribosomal-protein	−	83317	84809	1492
rpl23	gene	ribosomal-protein	−	84827	85109	282
trnI-CAU	gene	translation-rna	−	85274	85348	74
ycf2	gene	other	+	85436	92276	6840
ycf15	gene	other	+	92366	92615	249
trnL-CAA	gene	translation-rna	−	92882	92963	81
ndhB	gene	nad-dehydrogenase	−	93509	95721	2212
rps7	gene	ribosomal-protein	−	95995	96463	468
trnV-GAC	gene	translation-rna	+	98911	98983	72
rrn16	gene	ribosomal-rna	+	99210	100700	1490
trnI-GAU	gene	translation-rna	+	100999	102020	1021
trnA-UGC	gene	translation-rna	+	102084	102965	881
rrn23S	gene	ribosomal-rna	+	103126	105942	2816
rrn4.5S	gene	ribosomal-rna	+	106043	106146	103
rrn5S	gene	ribosomal-rna	+	106375	106496	121
trnR-ACG	gene	translation-rna	+	106740	106814	74
trnN-GUU	gene	translation-rna	−	107368	107440	72
ycf1	gene	other	+	107781	108862	1081
ndhF	gene	nad-dehydrogenase	−	108779	111065	2286
rpl32	gene	ribosomal-protein	+	111599	111776	177
trnL-UAG	gene	translation-rna	+	112187	112267	80
ccsA	gene	other	+	112355	113327	972
ndhD	gene	nad-dehydrogenase	−	113574	115104	1530
psaC	gene	photosystem-i	−	115195	115441	246
ndhE	gene	nad-dehydrogenase	−	115709	116015	306
ndhG	gene	nad-dehydrogenase	−	116216	116747	531
ndhI	gene	nad-dehydrogenase	−	117073	117580	507
ndhA	gene	nad-dehydrogenase	−	117655	119662	2007
ndhH	gene	nad-dehydrogenase	−	119663	120845	1182
rps15	gene	ribosomal-protein	−	120941	121214	273
ycf1	gene	other	−	121601	127169	5568
trnN-GUU	gene	translation-rna	+	127510	127582	72
trnR-ACG	gene	translation-rna	−	128136	128210	74
rrn5S	gene	ribosomal-rna	−	128454	128575	121
rrn4.5S	gene	ribosomal-rna	−	128804	128907	103
rrn23S	gene	ribosomal-rna	−	128906	131824	2918
trnA-UGC	gene	translation-rna	−	131985	132866	881
trnI-GAU	gene	translation-rna	−	132930	133951	1021
rrn16	gene	ribosomal-rna	−	134250	135740	1490
trnV-GAC	gene	translation-rna	−	135967	136039	72
rps7	gene	ribosomal-protein	+	138487	138955	468
ndhB	gene	nad-dehydrogenase	+	139229	141441	2212
trnL-CAA	gene	translation-rna	+	141987	142068	81
ycf15	gene	other	−	142335	142584	249
ycf2	gene	other	−	142674	149514	6840
trnI-CAU	gene	translation-rna	+	149602	149676	74
rpl23	gene	ribosomal-protein	+	149841	150123	282
rpl2	gene	ribosomal-protein	+	150141	151633	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_069833.1DNA · accDNC_069833DNA · atpBNC_069833DNA · matKNC_069833DNA · ndhFNC_069833DNA · psbANC_069833DNA · rbcLNC_069833DNA · rps12NC_069833DNA · ycf1NC_069833