Chelonopsis souliei chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH(GUG) · NC_058326.1 · 3–77 bp · −
psbA · NC_058326.1 · 410–1,468 bp · −
trnK(UUU) · NC_058326.1 · 1,701–4,302 bp · −
matK · NC_058326.1 · 2,017–3,552 bp · −
rps16 · NC_058326.1 · 5,209–6,349 bp · −
trnQ(UUG) · NC_058326.1 · 7,027–7,098 bp · −
trnS(GCU) · NC_058326.1 · 8,233–8,320 bp · −
atpA · NC_058326.1 · 10,068–11,591 bp · −
atpF · NC_058326.1 · 11,679–12,893 bp · −
atpH · NC_058326.1 · 13,259–13,504 bp · −
atpI · NC_058326.1 · 14,511–15,254 bp · −
rps2 · NC_058326.1 · 15,485–16,195 bp · −
rpoC2 · NC_058326.1 · 16,420–20,610 bp · −
rpoC1 · NC_058326.1 · 20,765–23,606 bp · −
rpoB · NC_058326.1 · 23,612–26,824 bp · −
psbM · NC_058326.1 · 29,770–29,874 bp · −
trnD(GUC) · NC_058326.1 · 30,401–30,474 bp · −
trnY(GUA) · NC_058326.1 · 30,590–30,673 bp · −
trnE(UUC) · NC_058326.1 · 30,733–30,802 bp · −
trnT(GGU) · NC_058326.1 · 31,366–31,437 bp · −
trnS(UGA) · NC_058326.1 · 35,327–35,419 bp · −
trnfM(CAU) · NC_058326.1 · 36,437–36,510 bp · −
rps14 · NC_058326.1 · 36,660–36,962 bp · −
psaB · NC_058326.1 · 37,090–39,294 bp · −
psaA · NC_058326.1 · 39,320–41,572 bp · −
ycf3 · NC_058326.1 · 42,290–44,241 bp · −
rps4 · NC_058326.1 · 44,892–45,497 bp · −
trnT(UGU) · NC_058326.1 · 45,872–45,944 bp · −
ndhJ · NC_058326.1 · 48,220–48,696 bp · −
ndhK · NC_058326.1 · 48,797–49,474 bp · −
ndhC · NC_058326.1 · 49,528–49,890 bp · −
trnV(UAC) · NC_058326.1 · 50,795–51,442 bp · −
atpE · NC_058326.1 · 51,921–52,322 bp · −
atpB · NC_058326.1 · 52,319–53,821 bp · −
psbJ · NC_058326.1 · 63,256–63,378 bp · −
psbL · NC_058326.1 · 63,516–63,632 bp · −
psbF · NC_058326.1 · 63,656–63,775 bp · −
psbE · NC_058326.1 · 63,790–64,041 bp · −
trnW(CCA) · NC_058326.1 · 65,463–65,536 bp · −
trnP(UGG) · NC_058326.1 · 65,706–65,779 bp · −
rpl20 · NC_058326.1 · 67,550–67,936 bp · −
rps12 · NC_058326.1 · 68,676–68,789 bp · −
rps12 · NC_058326.1 · 95,963–96,756 bp · −
clpP · NC_058326.1 · 68,915–70,786 bp · −
psbN · NC_058326.1 · 73,112–73,243 bp · −
rpoA · NC_058326.1 · 76,649–77,662 bp · −
rps11 · NC_058326.1 · 77,734–78,150 bp · −
rpl36 · NC_058326.1 · 78,253–78,366 bp · −
infA · NC_058326.1 · 78,462–78,695 bp · −
rps8 · NC_058326.1 · 78,818–79,231 bp · −
rpl14 · NC_058326.1 · 79,416–79,784 bp · −
rpl16 · NC_058326.1 · 79,911–81,175 bp · −
rps3 · NC_058326.1 · 81,331–81,993 bp · −
rpl22 · NC_058326.1 · 81,978–82,442 bp · −
rps19 · NC_058326.1 · 82,502–82,780 bp · −
rpl2 · NC_058326.1 · 82,833–84,324 bp · −
rpl23 · NC_058326.1 · 84,343–84,624 bp · −
trnI(CAU) · NC_058326.1 · 84,790–84,863 bp · −
trnL(CAA) · NC_058326.1 · 92,338–92,418 bp · −
ndhB · NC_058326.1 · 92,956–95,167 bp · −
rps7 · NC_058326.1 · 95,442–95,909 bp · −
trnN(GUU) · NC_058326.1 · 106,864–106,935 bp · −
ndhF · NC_058326.1 · 108,325–110,547 bp · −
ndhD · NC_058326.1 · 113,154–114,674 bp · −
psaC · NC_058326.1 · 114,776–115,021 bp · −
ndhE · NC_058326.1 · 115,284–115,589 bp · −
ndhG · NC_058326.1 · 115,812–116,342 bp · −
ndhI · NC_058326.1 · 116,699–117,205 bp · −
ndhA · NC_058326.1 · 117,285–119,443 bp · −
ndhH · NC_058326.1 · 119,445–120,626 bp · −
rps15 · NC_058326.1 · 120,727–120,999 bp · −
ycf1 · NC_058326.1 · 121,374–126,902 bp · −
trnR(ACG) · NC_058326.1 · 127,874–127,946 bp · −
rrn5S · NC_058326.1 · 128,181–128,301 bp · −
rrn4.5S · NC_058326.1 · 128,557–128,659 bp · −
rrn23S · NC_058326.1 · 128,758–131,568 bp · −
trnA(UGC) · NC_058326.1 · 131,769–132,647 bp · −
trnI(GAU) · NC_058326.1 · 132,712–133,719 bp · −
rrn16S · NC_058326.1 · 134,009–135,499 bp · −
trnV(GAC) · NC_058326.1 · 135,728–135,799 bp · −
ycf15 · NC_058326.1 · 142,066–142,314 bp · −
ycf2 · NC_058326.1 · 142,357–149,211 bp · −
psbK · NC_058326.1 · 7,435–7,620 bp · +
psbI · NC_058326.1 · 7,997–8,107 bp · +
trnG(UCC) · NC_058326.1 · 8,972–9,733 bp · +
trnR(UCU) · NC_058326.1 · 9,897–9,971 bp · +
trnC(GCA) · NC_058326.1 · 27,987–28,062 bp · +
petN · NC_058326.1 · 28,892–28,981 bp · +
psbD · NC_058326.1 · 32,666–33,727 bp · +
psbC · NC_058326.1 · 33,675–35,096 bp · +
psbZ · NC_058326.1 · 35,746–35,934 bp · +
trnG(GCC) · NC_058326.1 · 36,216–36,286 bp · +
trnS(GGA) · NC_058326.1 · 44,561–44,647 bp · +
trnL(UAA) · NC_058326.1 · 46,604–47,177 bp · +
trnF(GAA) · NC_058326.1 · 47,477–47,549 bp · +
trnM(CAU) · NC_058326.1 · 51,631–51,703 bp · +
rbcL · NC_058326.1 · 54,610–56,055 bp · +
accD · NC_058326.1 · 56,732–58,195 bp · +
psaI · NC_058326.1 · 58,738–58,848 bp · +
ycf4 · NC_058326.1 · 59,276–59,830 bp · +
cemA · NC_058326.1 · 60,386–61,075 bp · +
petA · NC_058326.1 · 61,292–62,254 bp · +
petL · NC_058326.1 · 64,954–65,049 bp · +
petG · NC_058326.1 · 65,224–65,337 bp · +
psaJ · NC_058326.1 · 66,050–66,184 bp · +
rpl33 · NC_058326.1 · 66,657–66,857 bp · +
rps18 · NC_058326.1 · 67,025–67,330 bp · +
rps12 · NC_058326.1 · 137,407–138,200 bp · +
psbB · NC_058326.1 · 71,217–72,743 bp · +
psbT · NC_058326.1 · 72,937–73,038 bp · +
psbH · NC_058326.1 · 73,347–73,568 bp · +
petB · NC_058326.1 · 73,693–75,078 bp · +
petD · NC_058326.1 · 75,273–76,486 bp · +
ycf2 · NC_058326.1 · 84,952–91,806 bp · +
ycf15 · NC_058326.1 · 91,849–92,097 bp · +
trnV(GAC) · NC_058326.1 · 98,364–98,435 bp · +
rrn16S · NC_058326.1 · 98,664–100,154 bp · +
trnI(GAU) · NC_058326.1 · 100,444–101,451 bp · +
trnA(UGC) · NC_058326.1 · 101,516–102,394 bp · +
rrn23S · NC_058326.1 · 102,595–105,405 bp · +
rrn4.5S · NC_058326.1 · 105,504–105,606 bp · +
rrn5S · NC_058326.1 · 105,862–105,982 bp · +
trnR(ACG) · NC_058326.1 · 106,217–106,289 bp · +
ycf1 · NC_058326.1 · 107,261–108,379 bp · +
rpl32 · NC_058326.1 · 110,945–111,121 bp · +
trnL(UAG) · NC_058326.1 · 111,839–111,918 bp · +
ccsA · NC_058326.1 · 112,002–112,973 bp · +
trnN(GUU) · NC_058326.1 · 127,228–127,299 bp · +
rps7 · NC_058326.1 · 138,254–138,721 bp · +
ndhB · NC_058326.1 · 138,996–141,207 bp · +
trnL(CAA) · NC_058326.1 · 141,745–141,825 bp · +
trnI(CAU) · NC_058326.1 · 149,300–149,373 bp · +
rpl23 · NC_058326.1 · 149,539–149,820 bp · +
rpl2 · NC_058326.1 · 149,839–151,330 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Chelonopsis souliei
ANNOTATED PLASTOME
NC_058326.1
151,423 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37856 75712 113567 151423 bp
Forward strand 5′ → 3′
psbK psbI trnG(UCC) trnR(UCU) trnC(GCA) petN psbD psbC psbZ trnG(GCC) trnS(GGA) trnL(UAA) trnF(GAA) trnM(CAU) rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV(GAC) rrn16S trnI(GAU) trnA(UGC) rrn23S rrn4.5S rrn5S trnR(ACG) ycf1 rpl32 trnL(UAG) ccsA trnN(GUU) rps12 rps7 ndhB trnL(CAA) trnI(CAU) rpl23 rpl2
trnH(GUG) psbA trnK(UUU) matK rps16 trnQ(UUG) trnS(GCU) atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD(GUC) trnY(GUA) trnE(UUC) trnT(GGU) trnS(UGA) trnfM(CAU) rps14 psaB psaA ycf3 rps4 trnT(UGU) ndhJ ndhK ndhC trnV(UAC) atpE atpB psbJ psbL psbF psbE trnW(CCA) trnP(UGG) rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI(CAU) trnL(CAA) ndhB rps7 rps12 trnN(GUU) ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR(ACG) rrn5S rrn4.5S rrn23S trnA(UGC) trnI(GAU) rrn16S trnV(GAC) ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH(GUG) gene − 3 77 75 Locate
psbA gene − 410 1468 1059 Locate
trnK(UUU) gene − 1701 4302 2602 Locate
matK gene − 2017 3552 1536 Locate
rps16 gene − 5209 6349 1141 Locate
trnQ(UUG) gene − 7027 7098 72 Locate
psbK gene + 7435 7620 186 Locate
psbI gene + 7997 8107 111 Locate
trnS(GCU) gene − 8233 8320 88 Locate
trnG(UCC) gene + 8972 9733 762 Locate
trnR(UCU) gene + 9897 9971 75 Locate
atpA gene − 10068 11591 1524 Locate
atpF gene − 11679 12893 1215 Locate
atpH gene − 13259 13504 246 Locate
atpI gene − 14511 15254 744 Locate
rps2 gene − 15485 16195 711 Locate
rpoC2 gene − 16420 20610 4191 Locate
rpoC1 gene − 20765 23606 2842 Locate
rpoB gene − 23612 26824 3213 Locate
trnC(GCA) gene + 27987 28062 76 Locate
petN gene + 28892 28981 90 Locate
psbM gene − 29770 29874 105 Locate
trnD(GUC) gene − 30401 30474 74 Locate
trnY(GUA) gene − 30590 30673 84 Locate
trnE(UUC) gene − 30733 30802 70 Locate
trnT(GGU) gene − 31366 31437 72 Locate
psbD gene + 32666 33727 1062 Locate
psbC gene + 33675 35096 1422 Locate
trnS(UGA) gene − 35327 35419 93 Locate
psbZ gene + 35746 35934 189 Locate
trnG(GCC) gene + 36216 36286 71 Locate
trnfM(CAU) gene − 36437 36510 74 Locate
rps14 gene − 36660 36962 303 Locate
psaB gene − 37090 39294 2205 Locate
psaA gene − 39320 41572 2253 Locate
ycf3 gene − 42290 44241 1952 Locate
trnS(GGA) gene + 44561 44647 87 Locate
rps4 gene − 44892 45497 606 Locate
trnT(UGU) gene − 45872 45944 73 Locate
trnL(UAA) gene + 46604 47177 574 Locate
trnF(GAA) gene + 47477 47549 73 Locate
ndhJ gene − 48220 48696 477 Locate
ndhK gene − 48797 49474 678 Locate
ndhC gene − 49528 49890 363 Locate
trnV(UAC) gene − 50795 51442 648 Locate
trnM(CAU) gene + 51631 51703 73 Locate
atpE gene − 51921 52322 402 Locate
atpB gene − 52319 53821 1503 Locate
rbcL gene + 54610 56055 1446 Locate
accD gene + 56732 58195 1464 Locate
psaI gene + 58738 58848 111 Locate
ycf4 gene + 59276 59830 555 Locate
cemA gene + 60386 61075 690 Locate
petA gene + 61292 62254 963 Locate
psbJ gene − 63256 63378 123 Locate
psbL gene − 63516 63632 117 Locate
psbF gene − 63656 63775 120 Locate
psbE gene − 63790 64041 252 Locate
petL gene + 64954 65049 96 Locate
petG gene + 65224 65337 114 Locate
trnW(CCA) gene − 65463 65536 74 Locate
trnP(UGG) gene − 65706 65779 74 Locate
psaJ gene + 66050 66184 135 Locate
rpl33 gene + 66657 66857 201 Locate
rps18 gene + 67025 67330 306 Locate
rpl20 gene − 67550 67936 387 Locate
rps12 gene − 68676 68789 114 Locate
clpP gene − 68915 70786 1872 Locate
psbB gene + 71217 72743 1527 Locate
psbT gene + 72937 73038 102 Locate
psbN gene − 73112 73243 132 Locate
psbH gene + 73347 73568 222 Locate
petB gene + 73693 75078 1386 Locate
petD gene + 75273 76486 1214 Locate
rpoA gene − 76649 77662 1014 Locate
rps11 gene − 77734 78150 417 Locate
rpl36 gene − 78253 78366 114 Locate
infA gene − 78462 78695 234 Locate
rps8 gene − 78818 79231 414 Locate
rpl14 gene − 79416 79784 369 Locate
rpl16 gene − 79911 81175 1265 Locate
rps3 gene − 81331 81993 663 Locate
rpl22 gene − 81978 82442 465 Locate
rps19 gene − 82502 82780 279 Locate
rpl2 gene − 82833 84324 1492 Locate
rpl23 gene − 84343 84624 282 Locate
trnI(CAU) gene − 84790 84863 74 Locate
ycf2 gene + 84952 91806 6855 Locate
ycf15 gene + 91849 92097 249 Locate
trnL(CAA) gene − 92338 92418 81 Locate
ndhB gene − 92956 95167 2212 Locate
rps7 gene − 95442 95909 468 Locate
rps12 gene − 95963 96756 794 Locate
trnV(GAC) gene + 98364 98435 72 Locate
rrn16S gene + 98664 100154 1491 Locate
trnI(GAU) gene + 100444 101451 1008 Locate
trnA(UGC) gene + 101516 102394 879 Locate
rrn23S gene + 102595 105405 2811 Locate
rrn4.5S gene + 105504 105606 103 Locate
rrn5S gene + 105862 105982 121 Locate
trnR(ACG) gene + 106217 106289 73 Locate
trnN(GUU) gene − 106864 106935 72 Locate
ycf1 gene + 107261 108379 1119 Locate
ndhF gene − 108325 110547 2223 Locate
rpl32 gene + 110945 111121 177 Locate
trnL(UAG) gene + 111839 111918 80 Locate
ccsA gene + 112002 112973 972 Locate
ndhD gene − 113154 114674 1521 Locate
psaC gene − 114776 115021 246 Locate
ndhE gene − 115284 115589 306 Locate
ndhG gene − 115812 116342 531 Locate
ndhI gene − 116699 117205 507 Locate
ndhA gene − 117285 119443 2159 Locate
ndhH gene − 119445 120626 1182 Locate
rps15 gene − 120727 120999 273 Locate
ycf1 gene − 121374 126902 5529 Locate
trnN(GUU) gene + 127228 127299 72 Locate
trnR(ACG) gene − 127874 127946 73 Locate
rrn5S gene − 128181 128301 121 Locate
rrn4.5S gene − 128557 128659 103 Locate
rrn23S gene − 128758 131568 2811 Locate
trnA(UGC) gene − 131769 132647 879 Locate
trnI(GAU) gene − 132712 133719 1008 Locate
rrn16S gene − 134009 135499 1491 Locate
trnV(GAC) gene − 135728 135799 72 Locate
rps12 gene + 137407 138200 794 Locate
rps7 gene + 138254 138721 468 Locate
ndhB gene + 138996 141207 2212 Locate
trnL(CAA) gene + 141745 141825 81 Locate
ycf15 gene − 142066 142314 249 Locate
ycf2 gene − 142357 149211 6855 Locate
trnI(CAU) gene + 149300 149373 74 Locate
rpl23 gene + 149539 149820 282 Locate
rpl2 gene + 149839 151330 1492 Locate
Status Available
Accession NC_058326.1
Length 151,423 bp
GC content 38.5%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources