Clerodendrum cyrtophyllum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · MZ958825.1 · 22–95 bp · −
psbA · MZ958825.1 · 442–1,500 bp · −
trnK-UUU · MZ958825.1 · 1,716–4,307 bp · −
matK · MZ958825.1 · 2,030–3,565 bp · −
rps16 · MZ958825.1 · 4,991–6,146 bp · −
trnQ-UUG · MZ958825.1 · 7,363–7,434 bp · −
trnS-GCU · MZ958825.1 · 8,609–8,696 bp · −
atpA · MZ958825.1 · 10,493–12,016 bp · −
atpF · MZ958825.1 · 12,103–13,331 bp · −
atpH · MZ958825.1 · 13,709–13,954 bp · −
atpI · MZ958825.1 · 14,999–15,742 bp · −
rps2 · MZ958825.1 · 15,907–16,617 bp · −
rpoC2 · MZ958825.1 · 16,825–20,991 bp · −
rpoB · MZ958825.1 · 23,999–27,211 bp · −
psbM · MZ958825.1 · 29,910–30,014 bp · −
trnD-GUC · MZ958825.1 · 30,536–30,609 bp · −
trnY-GUA · MZ958825.1 · 30,725–30,808 bp · −
trnE-UUC · MZ958825.1 · 30,875–30,947 bp · −
trnS-UGA · MZ958825.1 · 35,418–35,510 bp · −
trnM-CAU · MZ958825.1 · 36,495–36,568 bp · −
rps14 · MZ958825.1 · 36,713–37,015 bp · −
psaB · MZ958825.1 · 37,138–39,342 bp · −
psaA · MZ958825.1 · 39,368–41,620 bp · −
ycf3 · MZ958825.1 · 42,342–44,282 bp · −
rps4 · MZ958825.1 · 45,355–45,960 bp · −
trnT-UGU · MZ958825.1 · 46,342–46,414 bp · −
ndhJ · MZ958825.1 · 48,681–49,157 bp · −
ndhK · MZ958825.1 · 49,258–49,935 bp · −
ndhC · MZ958825.1 · 49,991–50,353 bp · −
trnV-UAC · MZ958825.1 · 51,219–51,882 bp · −
atpE · MZ958825.1 · 52,352–52,753 bp · −
atpB · MZ958825.1 · 52,750–54,246 bp · −
psbJ · MZ958825.1 · 63,750–63,872 bp · −
psbL · MZ958825.1 · 64,006–64,122 bp · −
psbF · MZ958825.1 · 64,146–64,265 bp · −
psbE · MZ958825.1 · 64,280–64,531 bp · −
trnW-CCA · MZ958825.1 · 65,969–66,042 bp · −
trnP-UGG · MZ958825.1 · 66,210–66,283 bp · −
rpl20 · MZ958825.1 · 68,083–68,469 bp · −
rps12 · MZ958825.1 · 69,293–69,406 bp · −
rps12 · MZ958825.1 · 96,746–97,542 bp · −
clpP · MZ958825.1 · 69,546–71,503 bp · −
psbN · MZ958825.1 · 73,797–73,928 bp · −
rpoA · MZ958825.1 · 77,360–78,373 bp · −
rps11 · MZ958825.1 · 78,453–78,869 bp · −
rpl36 · MZ958825.1 · 78,971–79,084 bp · −
infA · MZ958825.1 · 79,180–79,413 bp · −
rps8 · MZ958825.1 · 79,540–79,944 bp · −
rpl14 · MZ958825.1 · 80,113–80,481 bp · −
rpl16 · MZ958825.1 · 80,606–81,864 bp · −
rps3 · MZ958825.1 · 82,030–82,686 bp · −
rpl22 · MZ958825.1 · 82,671–83,138 bp · −
rps19 · MZ958825.1 · 83,194–83,472 bp · −
rpl2 · MZ958825.1 · 83,526–85,017 bp · −
rpl23 · MZ958825.1 · 85,036–85,317 bp · −
trnI-CAU · MZ958825.1 · 85,483–85,556 bp · −
trnL-CAA · MZ958825.1 · 93,109–93,189 bp · −
ndhB · MZ958825.1 · 93,739–95,950 bp · −
rps7 · MZ958825.1 · 96,225–96,692 bp · −
trnN-GUU · MZ958825.1 · 107,571–107,642 bp · −
ndhF · MZ958825.1 · 109,071–111,296 bp · −
ndhD · MZ958825.1 · 113,888–115,390 bp · −
psaC · MZ958825.1 · 115,518–115,763 bp · −
ndhE · MZ958825.1 · 116,014–116,319 bp · −
ndhG · MZ958825.1 · 116,541–117,071 bp · −
ndhI · MZ958825.1 · 117,430–117,936 bp · −
ndhH · MZ958825.1 · 120,021–121,202 bp · −
rps15 · MZ958825.1 · 121,299–121,571 bp · −
ycf1 · MZ958825.1 · 121,936–127,512 bp · −
trnR-ACG · MZ958825.1 · 128,489–128,562 bp · −
rrn5S · MZ958825.1 · 128,804–128,924 bp · −
rrn4.5S · MZ958825.1 · 129,154–129,256 bp · −
rrn23S · MZ958825.1 · 129,358–132,164 bp · −
trnA-UGC · MZ958825.1 · 132,326–133,205 bp · −
trnI-GAU · MZ958825.1 · 133,270–134,290 bp · −
rrn16S · MZ958825.1 · 134,589–136,078 bp · −
trnV-GAC · MZ958825.1 · 136,306–136,377 bp · −
ycf2 · MZ958825.1 · 143,000–149,851 bp · −
psbK · MZ958825.1 · 7,798–7,983 bp · +
psbI · MZ958825.1 · 8,390–8,500 bp · +
trnG-UCC · MZ958825.1 · 9,364–10,128 bp · +
trnR-UCU · MZ958825.1 · 10,317–10,388 bp · +
trnC-GCA · MZ958825.1 · 28,416–28,486 bp · +
petN · MZ958825.1 · 29,038–29,127 bp · +
trnT-GGU · MZ958825.1 · 31,495–31,566 bp · +
psbD · MZ958825.1 · 32,727–33,788 bp · +
psbC · MZ958825.1 · 33,736–35,157 bp · +
psbZ · MZ958825.1 · 35,836–36,024 bp · +
trnG-GCC · MZ958825.1 · 36,244–36,314 bp · +
trnS-GGA · MZ958825.1 · 44,956–45,042 bp · +
trnL-UAA · MZ958825.1 · 47,106–47,674 bp · +
trnM-CAU · MZ958825.1 · 52,063–52,135 bp · +
rbcL · MZ958825.1 · 55,040–56,479 bp · +
accD · MZ958825.1 · 57,132–58,664 bp · +
psaI · MZ958825.1 · 59,265–59,375 bp · +
ycf4 · MZ958825.1 · 59,804–60,358 bp · +
cemA · MZ958825.1 · 61,014–61,703 bp · +
petA · MZ958825.1 · 61,903–62,865 bp · +
petL · MZ958825.1 · 65,450–65,545 bp · +
petG · MZ958825.1 · 65,727–65,840 bp · +
psaJ · MZ958825.1 · 66,571–66,711 bp · +
rpl33 · MZ958825.1 · 67,175–67,375 bp · +
rps18 · MZ958825.1 · 67,542–67,847 bp · +
rps12 · MZ958825.1 · 137,954–138,750 bp · +
psbB · MZ958825.1 · 71,925–73,451 bp · +
psbT · MZ958825.1 · 73,629–73,736 bp · +
psbH · MZ958825.1 · 74,034–74,255 bp · +
petB · MZ958825.1 · 74,377–75,748 bp · +
petD · MZ958825.1 · 75,937–77,170 bp · +
ycf2 · MZ958825.1 · 85,645–92,496 bp · +
trnV-GAC · MZ958825.1 · 99,119–99,190 bp · +
rrn16S · MZ958825.1 · 99,418–100,907 bp · +
trnI-GAU · MZ958825.1 · 101,206–102,226 bp · +
trnA-UGC · MZ958825.1 · 102,291–103,170 bp · +
rrn23S · MZ958825.1 · 103,332–106,138 bp · +
rrn4.5S · MZ958825.1 · 106,240–106,342 bp · +
rrn5S · MZ958825.1 · 106,572–106,692 bp · +
trnR-ACG · MZ958825.1 · 106,934–107,007 bp · +
rpl32 · MZ958825.1 · 111,851–112,027 bp · +
trnL-UAG · MZ958825.1 · 112,492–112,571 bp · +
ccsA · MZ958825.1 · 112,677–113,630 bp · +
trnN-GUU · MZ958825.1 · 127,854–127,925 bp · +
rps7 · MZ958825.1 · 138,804–139,271 bp · +
ndhB · MZ958825.1 · 139,546–141,757 bp · +
trnL-CAA · MZ958825.1 · 142,307–142,387 bp · +
trnI-CAU · MZ958825.1 · 149,940–150,013 bp · +
rpl23 · MZ958825.1 · 150,179–150,460 bp · +
rpl2 · MZ958825.1 · 150,479–151,970 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Clerodendrum cyrtophyllum
ANNOTATED PLASTOME
MZ958825.1
152,052 bp · 127 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38013 76026 114039 152052 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
128 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 22 95 74 Locate
psbA gene − 442 1500 1059 Locate
trnK-UUU gene − 1716 4307 2592 Locate
matK gene − 2030 3565 1536 Locate
rps16 gene − 4991 6146 1156 Locate
trnQ-UUG gene − 7363 7434 72 Locate
psbK gene + 7798 7983 186 Locate
psbI gene + 8390 8500 111 Locate
trnS-GCU gene − 8609 8696 88 Locate
trnG-UCC gene + 9364 10128 765 Locate
trnR-UCU gene + 10317 10388 72 Locate
atpA gene − 10493 12016 1524 Locate
atpF gene − 12103 13331 1229 Locate
atpH gene − 13709 13954 246 Locate
atpI gene − 14999 15742 744 Locate
rps2 gene − 15907 16617 711 Locate
rpoC2 gene − 16825 20991 4167 Locate
rpoB gene − 23999 27211 3213 Locate
trnC-GCA gene + 28416 28486 71 Locate
petN gene + 29038 29127 90 Locate
psbM gene − 29910 30014 105 Locate
trnD-GUC gene − 30536 30609 74 Locate
trnY-GUA gene − 30725 30808 84 Locate
trnE-UUC gene − 30875 30947 73 Locate
trnT-GGU gene + 31495 31566 72 Locate
psbD gene + 32727 33788 1062 Locate
psbC gene + 33736 35157 1422 Locate
trnS-UGA gene − 35418 35510 93 Locate
psbZ gene + 35836 36024 189 Locate
trnG-GCC gene + 36244 36314 71 Locate
trnM-CAU gene − 36495 36568 74 Locate
rps14 gene − 36713 37015 303 Locate
psaB gene − 37138 39342 2205 Locate
psaA gene − 39368 41620 2253 Locate
ycf3 gene − 42342 44282 1941 Locate
trnS-GGA gene + 44956 45042 87 Locate
rps4 gene − 45355 45960 606 Locate
trnT-UGU gene − 46342 46414 73 Locate
trnL-UAA gene + 47106 47674 569 Locate
ndhJ gene − 48681 49157 477 Locate
ndhK gene − 49258 49935 678 Locate
ndhC gene − 49991 50353 363 Locate
trnV-UAC gene − 51219 51882 664 Locate
trnM-CAU gene + 52063 52135 73 Locate
atpE gene − 52352 52753 402 Locate
atpB gene − 52750 54246 1497 Locate
rbcL gene + 55040 56479 1440 Locate
accD gene + 57132 58664 1533 Locate
psaI gene + 59265 59375 111 Locate
ycf4 gene + 59804 60358 555 Locate
cemA gene + 61014 61703 690 Locate
petA gene + 61903 62865 963 Locate
psbJ gene − 63750 63872 123 Locate
psbL gene − 64006 64122 117 Locate
psbF gene − 64146 64265 120 Locate
psbE gene − 64280 64531 252 Locate
petL gene + 65450 65545 96 Locate
petG gene + 65727 65840 114 Locate
trnW-CCA gene − 65969 66042 74 Locate
trnP-UGG gene − 66210 66283 74 Locate
psaJ gene + 66571 66711 141 Locate
rpl33 gene + 67175 67375 201 Locate
rps18 gene + 67542 67847 306 Locate
rpl20 gene − 68083 68469 387 Locate
rps12 gene − 69293 69406 114 Locate
clpP gene − 69546 71503 1958 Locate
psbB gene + 71925 73451 1527 Locate
psbT gene + 73629 73736 108 Locate
psbN gene − 73797 73928 132 Locate
psbH gene + 74034 74255 222 Locate
petB gene + 74377 75748 1372 Locate
petD gene + 75937 77170 1234 Locate
rpoA gene − 77360 78373 1014 Locate
rps11 gene − 78453 78869 417 Locate
rpl36 gene − 78971 79084 114 Locate
infA gene − 79180 79413 234 Locate
rps8 gene − 79540 79944 405 Locate
rpl14 gene − 80113 80481 369 Locate
rpl16 gene − 80606 81864 1259 Locate
rps3 gene − 82030 82686 657 Locate
rpl22 gene − 82671 83138 468 Locate
rps19 gene − 83194 83472 279 Locate
rpl2 gene − 83526 85017 1492 Locate
rpl23 gene − 85036 85317 282 Locate
trnI-CAU gene − 85483 85556 74 Locate
ycf2 gene + 85645 92496 6852 Locate
trnL-CAA gene − 93109 93189 81 Locate
ndhB gene − 93739 95950 2212 Locate
rps7 gene − 96225 96692 468 Locate
rps12 gene − 96746 97542 797 Locate
trnV-GAC gene + 99119 99190 72 Locate
rrn16S gene + 99418 100907 1490 Locate
trnI-GAU gene + 101206 102226 1021 Locate
trnA-UGC gene + 102291 103170 880 Locate
rrn23S gene + 103332 106138 2807 Locate
rrn4.5S gene + 106240 106342 103 Locate
rrn5S gene + 106572 106692 121 Locate
trnR-ACG gene + 106934 107007 74 Locate
trnN-GUU gene − 107571 107642 72 Locate
ndhF gene − 109071 111296 2226 Locate
rpl32 gene + 111851 112027 177 Locate
trnL-UAG gene + 112492 112571 80 Locate
ccsA gene + 112677 113630 954 Locate
ndhD gene − 113888 115390 1503 Locate
psaC gene − 115518 115763 246 Locate
ndhE gene − 116014 116319 306 Locate
ndhG gene − 116541 117071 531 Locate
ndhI gene − 117430 117936 507 Locate
ndhH gene − 120021 121202 1182 Locate
rps15 gene − 121299 121571 273 Locate
ycf1 gene − 121936 127512 5577 Locate
trnN-GUU gene + 127854 127925 72 Locate
trnR-ACG gene − 128489 128562 74 Locate
rrn5S gene − 128804 128924 121 Locate
rrn4.5S gene − 129154 129256 103 Locate
rrn23S gene − 129358 132164 2807 Locate
trnA-UGC gene − 132326 133205 880 Locate
trnI-GAU gene − 133270 134290 1021 Locate
rrn16S gene − 134589 136078 1490 Locate
trnV-GAC gene − 136306 136377 72 Locate
rps12 gene + 137954 138750 797 Locate
rps7 gene + 138804 139271 468 Locate
ndhB gene + 139546 141757 2212 Locate
trnL-CAA gene + 142307 142387 81 Locate
ycf2 gene − 143000 149851 6852 Locate
trnI-CAU gene + 149940 150013 74 Locate
rpl23 gene + 150179 150460 282 Locate
rpl2 gene + 150479 151970 1492 Locate
Status Available
Accession MZ958825.1
Length 152,052 bp
GC content 38.1%
Annotated genes 127
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 3 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 11 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources