Coordinate-aware organelle record

Clerodendrum deflexum chloroplast genome

Available NC_084176.1 151,414 bp 128 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

128 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	77	75
psbA	gene	photosystem-ii	−	441	1500	1059
trnK-UUU	gene	translation-rna	−	1715	4300	2585
matK	gene	other	−	2016	3558	1542
rps16	gene	ribosomal-protein	−	4950	6096	1146
trnQ-UUG	gene	translation-rna	−	7336	7408	72
psbK	gene	photosystem-ii	+	7770	7956	186
psbI	gene	photosystem-ii	+	8364	8475	111
trnS-GCU	gene	translation-rna	−	8586	8674	88
trnG-UCC	gene	translation-rna	+	9325	10091	766
trnR-UCU	gene	translation-rna	+	10275	10347	72
atpA	gene	atp-synthase	−	10451	11975	1524
atpF	gene	atp-synthase	−	12066	13294	1228
atpH	gene	atp-synthase	−	13669	13915	246
atpI	gene	atp-synthase	−	14953	15697	744
rps2	gene	ribosomal-protein	−	15871	16582	711
rpoC2	gene	rna-polymerase	−	16796	20963	4167
rpoC1	gene	rna-polymerase	−	21129	23942	2813
rpoB	gene	rna-polymerase	−	23968	27181	3213
trnC-GCA	gene	translation-rna	+	28368	28439	71
petN	gene	cytochrome	+	29001	29091	90
psbM	gene	photosystem-ii	−	30020	30125	105
trnD-GUC	gene	translation-rna	−	30647	30721	74
trnY-GUA	gene	translation-rna	−	30837	30921	84
trnE-UUC	gene	translation-rna	−	30980	31053	73
trnT-GGU	gene	translation-rna	+	31600	31672	72
psbD	gene	photosystem-ii	+	32834	33896	1062
psbC	gene	photosystem-ii	+	33879	35265	1386
trnS-UGA	gene	translation-rna	−	35525	35618	93
psbZ	gene	photosystem-ii	+	35946	36135	189
trnG-GCC	gene	translation-rna	+	36354	36425	71
rps14	gene	ribosomal-protein	−	36807	37110	303
psaB	gene	photosystem-i	−	37232	39437	2205
psaA	gene	photosystem-i	−	39462	41715	2253
pafI	gene	other	−	42435	44374	1939
trnS-GGA	gene	translation-rna	+	45068	45155	87
rps4	gene	ribosomal-protein	−	45461	46067	606
trnT-UGU	gene	translation-rna	−	46444	46517	73
trnL-UAA	gene	translation-rna	+	47219	47785	566
trnF-GAA	gene	translation-rna	+	48089	48162	73
ndhJ	gene	nad-dehydrogenase	−	48782	49259	477
ndhK	gene	nad-dehydrogenase	−	49359	50109	750
ndhC	gene	nad-dehydrogenase	−	50099	50462	363
trnV-UAC	gene	translation-rna	−	50606	51269	663
trnM-CAU	gene	translation-rna	+	51449	51522	73
atpE	gene	atp-synthase	−	51758	52160	402
atpB	gene	atp-synthase	−	52156	53653	1497
rbcL	gene	other	+	54438	55878	1440
accD	gene	other	+	56591	58073	1482
psaI	gene	photosystem-i	+	58682	58793	111
pafII	gene	other	+	59172	59727	555
cemA	gene	other	+	60382	61072	690
petA	gene	cytochrome	+	61280	62243	963
psbJ	gene	photosystem-ii	−	63137	63260	123
psbL	gene	photosystem-ii	−	63393	63510	117
psbF	gene	photosystem-ii	−	63533	63653	120
psbE	gene	photosystem-ii	−	63667	63919	252
petL	gene	cytochrome	+	64834	64930	96
petG	gene	cytochrome	+	65106	65220	114
trnW-CCA	gene	translation-rna	−	65342	65416	74
trnP-UGG	gene	translation-rna	−	65583	65657	74
psaJ	gene	photosystem-i	+	65934	66063	129
rpl33	gene	ribosomal-protein	+	66546	66747	201
rps18	gene	ribosomal-protein	+	66920	67226	306
rpl20	gene	ribosomal-protein	−	67461	67848	387
rps12	gene	ribosomal-protein	−	68665	96860	28195
rps12	gene	ribosomal-protein	+	68665	138117	69452
clpP1	gene	other	−	68904	70862	1958
psbB	gene	photosystem-ii	+	71283	72810	1527
psbT	gene	photosystem-ii	+	72987	73095	108
pbf1	gene	other	−	73155	73287	132
psbH	gene	photosystem-ii	+	73398	73620	222
petB	gene	cytochrome	+	73741	75121	1380
petD	gene	cytochrome	+	75309	76527	1218
rpoA	gene	rna-polymerase	−	76716	77730	1014
rps11	gene	ribosomal-protein	−	77801	78218	417
rpl36	gene	ribosomal-protein	−	78319	78433	114
infA	gene	other	−	78528	78762	234
rps8	gene	ribosomal-protein	−	78888	79293	405
rpl14	gene	ribosomal-protein	−	79463	79832	369
rpl16	gene	ribosomal-protein	−	79940	81205	1265
rps3	gene	ribosomal-protein	−	81364	82021	657
rpl22	gene	ribosomal-protein	−	82005	82473	468
rps19	gene	ribosomal-protein	−	82528	82807	279
rpl2	gene	ribosomal-protein	−	82860	84352	1492
rpl23	gene	ribosomal-protein	−	84370	84652	282
trnI-CAU	gene	translation-rna	−	84817	84891	74
ycf2	gene	other	+	84979	91813	6834
trnL-CAA	gene	translation-rna	−	92425	92506	81
ndhB	gene	nad-dehydrogenase	−	93055	95267	2212
rps7	gene	ribosomal-protein	−	95542	96010	468
trnV-GAC	gene	translation-rna	+	98453	98525	72
rrn16	gene	ribosomal-rna	+	98752	100243	1491
trnI-GAU	gene	translation-rna	+	100540	101560	1020
trnA-UGC	gene	translation-rna	+	101624	102504	880
rrn4.5	gene	ribosomal-rna	+	105573	105676	103
rrn5	gene	ribosomal-rna	+	105936	106057	121
trnR-ACG	gene	translation-rna	+	106308	106382	74
trnN-GUU	gene	translation-rna	−	106945	107017	72
ycf1	gene	other	+	107358	108453	1095
ndhF	gene	nad-dehydrogenase	−	108442	110668	2226
rpl32	gene	ribosomal-protein	+	111204	111381	177
trnL-UAG	gene	translation-rna	+	111836	111916	80
ccsA	gene	other	+	112004	112970	966
ndhD	gene	nad-dehydrogenase	−	113215	114718	1503
psaC	gene	photosystem-i	−	114844	115090	246
ndhE	gene	nad-dehydrogenase	−	115340	115646	306
ndhG	gene	nad-dehydrogenase	−	115851	116382	531
ndhI	gene	nad-dehydrogenase	−	116732	117239	507
ndhA	gene	nad-dehydrogenase	−	117314	119316	2002
ndhH	gene	nad-dehydrogenase	−	119317	120499	1182
rps15	gene	ribosomal-protein	−	120595	120868	273
ycf1	gene	other	−	121251	126822	5571
trnN-GUU	gene	translation-rna	+	127163	127235	72
trnR-ACG	gene	translation-rna	−	127798	127872	74
rrn5	gene	ribosomal-rna	−	128123	128244	121
rrn4.5	gene	ribosomal-rna	−	128504	128607	103
trnA-UGC	gene	translation-rna	−	131676	132556	880
trnI-GAU	gene	translation-rna	−	132620	133640	1020
rrn16	gene	ribosomal-rna	−	133937	135428	1491
trnV-GAC	gene	translation-rna	−	135655	135727	72
rps7	gene	ribosomal-protein	+	138170	138638	468
ndhB	gene	nad-dehydrogenase	+	138913	141125	2212
trnL-CAA	gene	translation-rna	+	141674	141755	81
ycf2	gene	other	−	142367	149201	6834
trnI-CAU	gene	translation-rna	+	149289	149363	74
rpl23	gene	ribosomal-protein	+	149528	149810	282
rpl2	gene	ribosomal-protein	+	149828	151320	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_084176.1DNA · accDNC_084176DNA · atpBNC_084176DNA · matKNC_084176DNA · ndhFNC_084176DNA · psbANC_084176DNA · rbcLNC_084176DNA · rps12NC_084176DNA · ycf1NC_084176