Coordinate-aware organelle record

Clinopodium abyssinicum chloroplast genome

Available NC_058327.1 151,513 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH(GUG)	gene	translation-rna	−	5	80	75
psbA	gene	photosystem-ii	−	402	1461	1059
trnK(UUU)	gene	translation-rna	−	1681	4268	2587
matK	gene	other	−	1997	3527	1530
rps16	gene	ribosomal-protein	−	4792	5936	1144
trnQ(UUG)	gene	translation-rna	−	6898	6970	72
psbK	gene	photosystem-ii	+	7350	7536	186
psbI	gene	photosystem-ii	+	7928	8039	111
trnS(GCU)	gene	translation-rna	−	8125	8213	88
trnG(UCC)	gene	translation-rna	+	8923	9676	753
trnR(UCU)	gene	translation-rna	+	9854	9929	75
atpA	gene	atp-synthase	−	10037	11561	1524
atpF	gene	atp-synthase	−	11653	12909	1256
atpH	gene	atp-synthase	−	13176	13422	246
atpI	gene	atp-synthase	−	14285	15029	744
rps2	gene	ribosomal-protein	−	15253	15964	711
rpoC2	gene	rna-polymerase	−	16191	20391	4200
rpoC1	gene	rna-polymerase	−	20552	23385	2833
rpoB	gene	rna-polymerase	−	23390	26603	3213
trnC(GCA)	gene	translation-rna	+	27742	27820	78
petN	gene	cytochrome	+	27973	28063	90
psbM	gene	photosystem-ii	−	29011	29116	105
trnD(GUC)	gene	translation-rna	−	29634	29708	74
trnY(GUA)	gene	translation-rna	−	29825	29909	84
trnE(UUC)	gene	translation-rna	−	29989	30059	70
trnT(GGU)	gene	translation-rna	−	30537	30609	72
psbD	gene	photosystem-ii	+	31968	33030	1062
psbC	gene	photosystem-ii	+	32977	34399	1422
trnS(UGA)	gene	translation-rna	−	34644	34737	93
psbZ	gene	photosystem-ii	+	35083	35272	189
trnG(GCC)	gene	translation-rna	+	35530	35601	71
trnfM(CAU)	gene	translation-rna	−	35760	35834	74
rps14	gene	ribosomal-protein	−	35983	36286	303
psaB	gene	photosystem-i	−	36408	38613	2205
psaA	gene	photosystem-i	−	38638	40891	2253
ycf3	gene	other	−	41674	43619	1945
trnS(GGA)	gene	translation-rna	+	44442	44529	87
rps4	gene	ribosomal-protein	−	44811	45417	606
trnT(UGU)	gene	translation-rna	−	45785	45858	73
trnL(UAA)	gene	translation-rna	+	46538	47122	584
trnF(GAA)	gene	translation-rna	+	47405	47478	73
ndhJ	gene	nad-dehydrogenase	−	48127	48604	477
ndhK	gene	nad-dehydrogenase	−	48714	49392	678
ndhC	gene	nad-dehydrogenase	−	49443	49806	363
trnV(UAC)	gene	translation-rna	−	50761	51406	645
trnM(CAU)	gene	translation-rna	+	51586	51659	73
atpE	gene	atp-synthase	−	51854	52256	402
atpB	gene	atp-synthase	−	52252	53743	1491
rbcL	gene	other	+	54521	55955	1434
accD	gene	other	+	56651	58133	1482
psaI	gene	photosystem-i	+	58614	58725	111
ycf4	gene	other	+	59169	59724	555
cemA	gene	other	+	60370	61060	690
petA	gene	cytochrome	+	61273	62236	963
psbJ	gene	photosystem-ii	−	63261	63384	123
psbL	gene	photosystem-ii	−	63518	63635	117
psbF	gene	photosystem-ii	−	63658	63778	120
psbE	gene	photosystem-ii	−	63792	64044	252
petL	gene	cytochrome	+	64914	65010	96
petG	gene	cytochrome	+	65179	65293	114
trnW(CCA)	gene	translation-rna	−	65398	65472	74
trnP(UGG)	gene	translation-rna	−	65648	65722	74
psaJ	gene	photosystem-i	+	66005	66140	135
rpl33	gene	ribosomal-protein	+	66593	66797	204
rps18	gene	ribosomal-protein	+	66968	67274	306
rpl20	gene	ribosomal-protein	−	67507	67894	387
rps12	gene	ribosomal-protein	−	68711	96858	28147
rps12	gene	ribosomal-protein	+	68711	138278	69567
clpP	gene	other	−	68949	70875	1926
psbB	gene	photosystem-ii	+	71331	72858	1527
psbT	gene	photosystem-ii	+	73052	73154	102
psbN	gene	photosystem-ii	−	73222	73354	132
psbH	gene	photosystem-ii	+	73441	73681	240
petB	gene	cytochrome	+	73806	75189	1383
petD	gene	cytochrome	+	75376	76563	1187
rpoA	gene	rna-polymerase	−	76749	77757	1008
rps11	gene	ribosomal-protein	−	77828	78245	417
rpl36	gene	ribosomal-protein	−	78354	78468	114
infA	gene	other	−	78563	78797	234
rps8	gene	ribosomal-protein	−	78923	79328	405
rpl14	gene	ribosomal-protein	−	79507	79876	369
rpl16	gene	ribosomal-protein	−	80007	81282	1275
rps3	gene	ribosomal-protein	−	81426	82089	663
rpl22	gene	ribosomal-protein	−	82073	82541	468
rps19	gene	ribosomal-protein	−	82611	82890	279
rpl2	gene	ribosomal-protein	−	82950	84440	1490
rpl23	gene	ribosomal-protein	−	84458	84740	282
trnI(CAU)	gene	translation-rna	−	84905	84979	74
ycf2	gene	other	+	85067	91835	6768
ycf15	gene	other	+	91925	92174	249
trnL(CAA)	gene	translation-rna	−	92429	92510	81
ndhB	gene	nad-dehydrogenase	−	93070	95278	2208
rps7	gene	ribosomal-protein	−	95543	96011	468
trnV(GAC)	gene	translation-rna	+	98483	98555	72
rrn16S	gene	ribosomal-rna	+	98781	100272	1491
trnI(GAU)	gene	translation-rna	+	100570	101592	1022
trnA(UGC)	gene	translation-rna	+	101662	102531	869
rrn23S	gene	ribosomal-rna	+	102713	105524	2811
rrn4.5S	gene	ribosomal-rna	+	105622	105725	103
rrn5S	gene	ribosomal-rna	+	105985	106106	121
trnR(ACG)	gene	translation-rna	+	106349	106422	73
trnN(GUU)	gene	translation-rna	−	106947	107019	72
ycf1	gene	other	+	107348	108479	1131
ndhF	gene	nad-dehydrogenase	−	108372	110604	2232
rpl32	gene	ribosomal-protein	+	111066	111252	186
trnL(UAG)	gene	translation-rna	+	111954	112039	85
ccsA	gene	other	+	112141	113119	978
ndhD	gene	nad-dehydrogenase	−	113348	114878	1530
psaC	gene	photosystem-i	−	114971	115217	246
ndhE	gene	nad-dehydrogenase	−	115457	115763	306
ndhG	gene	nad-dehydrogenase	−	115986	116517	531
ndhI	gene	nad-dehydrogenase	−	116904	117411	507
ndhA	gene	nad-dehydrogenase	−	117486	119577	2091
ndhH	gene	nad-dehydrogenase	−	119578	120760	1182
rps15	gene	ribosomal-protein	−	120859	121132	273
ycf1	gene	other	−	121543	126994	5451
trnN(GUU)	gene	translation-rna	+	127323	127395	72
trnR(ACG)	gene	translation-rna	−	127920	127993	73
rrn5S	gene	ribosomal-rna	−	128236	128357	121
rrn4.5S	gene	ribosomal-rna	−	128617	128720	103
rrn23S	gene	ribosomal-rna	−	128818	131629	2811
trnA(UGC)	gene	translation-rna	−	131811	132681	870
trnI(GAU)	gene	translation-rna	−	132750	133772	1022
rrn16S	gene	ribosomal-rna	−	134070	135561	1491
trnV(GAC)	gene	translation-rna	−	135787	135859	72
rps7	gene	ribosomal-protein	+	138331	138799	468
ndhB	gene	nad-dehydrogenase	+	139064	141272	2208
trnL(CAA)	gene	translation-rna	+	141832	141913	81
ycf15	gene	other	−	142168	142417	249
ycf2	gene	other	−	142507	149275	6768
trnI(CAU)	gene	translation-rna	+	149363	149437	74
rpl23	gene	ribosomal-protein	+	149602	149884	282
rpl2	gene	ribosomal-protein	+	149902	151392	1490
rps19	gene	ribosomal-protein	+	151452	151513	61

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_058327.1DNA · accDNC_058327DNA · atpBNC_058327DNA · matKNC_058327DNA · ndhFNC_058327DNA · psbANC_058327DNA · rbcLNC_058327DNA · rps12NC_058327DNA · ycf1NC_058327