Coordinate-aware organelle record

Clinopodium acinos chloroplast genome

Available PP190943.1 151,971 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	415	1474	1059
trnK-UUU	gene	translation-rna	−	1693	4285	2592
matK	gene	other	−	2018	3548	1530
rps16	gene	ribosomal-protein	−	4828	5976	1148
trnQ-UUG	gene	translation-rna	−	6980	7052	72
psbK	gene	photosystem-ii	+	7432	7618	186
psbI	gene	photosystem-ii	+	8010	8121	111
trnS-GCU	gene	translation-rna	−	8265	8353	88
trnG-UCC	gene	translation-rna	+	9045	9798	753
trnR-UCU	gene	translation-rna	+	9971	10043	72
atpA	gene	atp-synthase	−	10151	11675	1524
atpF	gene	atp-synthase	−	11767	13022	1255
atpH	gene	atp-synthase	−	13300	13546	246
atpI	gene	atp-synthase	−	14583	15327	744
rps2	gene	ribosomal-protein	−	15551	16262	711
rpoC2	gene	rna-polymerase	−	16483	20671	4188
rpoC1	gene	rna-polymerase	−	20843	23655	2812
rpoB	gene	rna-polymerase	−	23681	26894	3213
trnC-GCA	gene	translation-rna	+	28026	28097	71
petN	gene	cytochrome	+	28257	28347	90
psbM	gene	photosystem-ii	−	29301	29406	105
trnD-GUC	gene	translation-rna	−	29921	29998	77
trnY-GUA	gene	translation-rna	−	30113	30199	86
trnE-UUC	gene	translation-rna	−	30277	30350	73
trnT-GGU	gene	translation-rna	+	30900	30974	74
psbD	gene	photosystem-ii	+	32339	33401	1062
psbC	gene	photosystem-ii	+	33348	34770	1422
trnS-UGA	gene	translation-rna	−	35014	35107	93
psbZ	gene	photosystem-ii	+	35445	35634	189
trnG-GCC	gene	translation-rna	+	35903	35975	72
trnM-CAU	gene	translation-rna	−	36149	36224	75
rps14	gene	ribosomal-protein	−	36373	36676	303
psaB	gene	photosystem-i	−	36801	39006	2205
psaA	gene	photosystem-i	−	39031	41284	2253
ycf3	gene	other	−	42085	44027	1942
trnS-GGA	gene	translation-rna	+	44873	44961	88
rps4	gene	ribosomal-protein	−	45247	45853	606
trnT-UGU	gene	translation-rna	−	46231	46306	75
trnL-UAA	gene	translation-rna	+	46986	47563	577
trnF-GAA	gene	translation-rna	+	47855	47929	74
ndhJ	gene	nad-dehydrogenase	−	48566	49043	477
ndhK	gene	nad-dehydrogenase	−	49153	49831	678
ndhC	gene	nad-dehydrogenase	−	49882	50245	363
trnV-UAC	gene	translation-rna	−	51214	51859	645
trnM-CAU	gene	translation-rna	+	52039	52112	73
atpE	gene	atp-synthase	−	52322	52724	402
atpB	gene	atp-synthase	−	52720	54211	1491
rbcL	gene	other	+	54972	56427	1455
accD	gene	other	+	57182	58664	1482
psaI	gene	photosystem-i	+	59136	59247	111
ycf4	gene	other	+	59697	60252	555
cemA	gene	other	+	60631	61321	690
petA	gene	cytochrome	+	61539	62502	963
psbJ	gene	photosystem-ii	−	63513	63636	123
psbL	gene	photosystem-ii	−	63770	63887	117
psbF	gene	photosystem-ii	−	63910	64030	120
psbE	gene	photosystem-ii	−	64044	64296	252
petL	gene	cytochrome	+	65175	65271	96
petG	gene	cytochrome	+	65440	65554	114
trnW-CCA	gene	translation-rna	−	65668	65742	74
trnP-UGG	gene	translation-rna	−	65913	65989	76
psaJ	gene	photosystem-i	+	66263	66398	135
rpl33	gene	ribosomal-protein	+	66846	67050	204
rps18	gene	ribosomal-protein	+	67200	67506	306
rpl20	gene	ribosomal-protein	−	67738	68125	387
rps12	gene	ribosomal-protein	−	68925	97162	28237
rps12	gene	ribosomal-protein	+	68925	138696	69771
clpP1	gene	other	−	69161	71088	1927
psbB	gene	photosystem-ii	+	71546	73073	1527
psbT	gene	photosystem-ii	+	73269	73371	102
psbN	gene	photosystem-ii	−	73439	73571	132
psbH	gene	photosystem-ii	+	73676	73898	222
petB	gene	cytochrome	+	74031	75411	1380
petD	gene	cytochrome	+	75598	76787	1189
rpoA	gene	rna-polymerase	−	76991	77999	1008
rps11	gene	ribosomal-protein	−	78069	78486	417
rpl36	gene	ribosomal-protein	−	78595	78709	114
infA	gene	other	−	78804	79038	234
rps8	gene	ribosomal-protein	−	79163	79568	405
rpl14	gene	ribosomal-protein	−	79750	80119	369
rpl16	gene	ribosomal-protein	−	80250	81523	1273
rps3	gene	ribosomal-protein	−	81673	82336	663
rpl22	gene	ribosomal-protein	−	82320	82788	468
rps19	gene	ribosomal-protein	−	82857	83136	279
rpl2	gene	ribosomal-protein	−	83195	84687	1492
rpl23	gene	ribosomal-protein	−	84705	84987	282
trnM-CAU	gene	translation-rna	−	85151	85226	75
ycf2	gene	other	+	85334	92147	6813
ycf15	gene	other	+	92237	92486	249
trnL-CAA	gene	translation-rna	−	92740	92823	83
ndhB	gene	nad-dehydrogenase	−	93382	95582	2200
rps7	gene	ribosomal-protein	−	95847	96315	468
trnV-GAC	gene	translation-rna	+	98793	98865	72
rrn16	gene	ribosomal-rna	+	99091	100582	1491
trnI	gene	translation-rna	+	100880	101901	1021
trnA-UGC	gene	translation-rna	+	101971	102849	878
rrn23	gene	ribosomal-rna	+	103013	105824	2811
rrn4.5	gene	ribosomal-rna	+	105922	106025	103
rrn5	gene	ribosomal-rna	+	106285	106406	121
trnR-ACG	gene	translation-rna	+	106649	106724	75
trnN-GUU	gene	translation-rna	−	107246	107320	74
ycf1	gene	other	+	107648	108779	1131
ndhF	gene	nad-dehydrogenase	−	108672	110904	2232
rpl32	gene	ribosomal-protein	+	111346	111517	171
trnL-UAG	gene	translation-rna	+	112271	112351	80
ccsA	gene	other	+	112452	113430	978
ndhD	gene	nad-dehydrogenase	−	113681	115184	1503
psaC	gene	photosystem-i	−	115313	115559	246
ndhE	gene	nad-dehydrogenase	−	115804	116110	306
ndhG	gene	nad-dehydrogenase	−	116324	116855	531
ndhI	gene	nad-dehydrogenase	−	117241	117748	507
ndhA	gene	nad-dehydrogenase	−	117823	119915	2092
ndhH	gene	nad-dehydrogenase	−	119916	121152	1236
rps15	gene	ribosomal-protein	−	121197	121470	273
ycf1	gene	other	−	121920	127527	5607
trnN-GUU	gene	translation-rna	+	127744	127818	74
trnR-ACG	gene	translation-rna	−	128340	128415	75
rrn5	gene	ribosomal-rna	−	128658	128779	121
rrn4.5	gene	ribosomal-rna	−	129039	129142	103
rrn23	gene	ribosomal-rna	−	129240	132051	2811
trnA-UGC	gene	translation-rna	−	132215	133093	878
trnI	gene	translation-rna	−	133163	134184	1021
rrn16	gene	ribosomal-rna	−	134482	135973	1491
trnV-GAC	gene	translation-rna	−	136199	136271	72
rps7	gene	ribosomal-protein	+	138749	139217	468
ndhB	gene	nad-dehydrogenase	+	139482	141682	2200
trnL-CAA	gene	translation-rna	+	142241	142324	83
ycf15	gene	other	−	142578	142827	249
ycf2	gene	other	−	142917	149730	6813
trnM-CAU	gene	translation-rna	+	149838	149913	75
rpl23	gene	ribosomal-protein	+	150077	150359	282
rpl2	gene	ribosomal-protein	+	150377	151869	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP190943.1DNA · accDPP190943DNA · atpBPP190943DNA · matKPP190943DNA · ndhFPP190943DNA · psbAPP190943DNA · rbcLPP190943DNA · rps12PP190943DNA · ycf1PP190943