Coordinate-aware organelle record

Clinopodium vulgare subsp. vulgare chloroplast genome

Available PP190944.1 151,999 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	84	75
psbA	gene	photosystem-ii	−	389	1448	1059
trnK-UUU	gene	translation-rna	−	1667	4259	2592
matK	gene	other	−	1992	3522	1530
rps16	gene	ribosomal-protein	−	4799	5937	1138
trnQ-UUG	gene	translation-rna	−	6872	6944	72
psbK	gene	photosystem-ii	+	7324	7510	186
psbI	gene	photosystem-ii	+	7901	8012	111
trnS-GCU	gene	translation-rna	−	8146	8234	88
trnG-UCC	gene	translation-rna	+	8940	9699	759
trnR-UCU	gene	translation-rna	+	9880	9952	72
atpA	gene	atp-synthase	−	10060	11584	1524
atpF	gene	atp-synthase	−	11676	12930	1254
atpH	gene	atp-synthase	−	13196	13442	246
atpI	gene	atp-synthase	−	14457	15201	744
rps2	gene	ribosomal-protein	−	15425	16136	711
rpoC2	gene	rna-polymerase	−	16359	20547	4188
rpoC1	gene	rna-polymerase	−	20719	23531	2812
rpoB	gene	rna-polymerase	−	23557	26770	3213
trnC-GCA	gene	translation-rna	+	27913	27984	71
petN	gene	cytochrome	+	28144	28234	90
psbM	gene	photosystem-ii	−	29192	29297	105
trnD-GUC	gene	translation-rna	−	29813	29890	77
trnY-GUA	gene	translation-rna	−	30006	30092	86
trnE-UUC	gene	translation-rna	−	30158	30231	73
trnT-GGU	gene	translation-rna	+	30790	30864	74
psbD	gene	photosystem-ii	+	32214	33276	1062
psbC	gene	photosystem-ii	+	33223	34645	1422
trnS-UGA	gene	translation-rna	−	34889	34982	93
psbZ	gene	photosystem-ii	+	35321	35510	189
trnG-GCC	gene	translation-rna	+	35781	35853	72
trnM-CAU	gene	translation-rna	−	36012	36087	75
rps14	gene	ribosomal-protein	−	36236	36539	303
psaB	gene	photosystem-i	−	36661	38866	2205
psaA	gene	photosystem-i	−	38891	41144	2253
ycf3	gene	other	−	41934	43872	1938
trnS-GGA	gene	translation-rna	+	44695	44783	88
rps4	gene	ribosomal-protein	−	45073	45679	606
trnT-UGU	gene	translation-rna	−	46053	46128	75
trnL-UAA	gene	translation-rna	+	46799	47380	581
trnF-GAA	gene	translation-rna	+	47662	47736	74
ndhJ	gene	nad-dehydrogenase	−	48374	48851	477
ndhK	gene	nad-dehydrogenase	−	48961	49639	678
ndhC	gene	nad-dehydrogenase	−	49690	50053	363
trnV-UAC	gene	translation-rna	−	51000	51645	645
trnM-CAU	gene	translation-rna	+	51825	51898	73
atpE	gene	atp-synthase	−	52087	52489	402
atpB	gene	atp-synthase	−	52485	53976	1491
rbcL	gene	other	+	54744	56199	1455
accD	gene	other	+	56895	58377	1482
psaI	gene	photosystem-i	+	58869	58980	111
ycf4	gene	other	+	59424	59979	555
cemA	gene	other	+	60632	61322	690
petA	gene	cytochrome	+	61535	62498	963
psbJ	gene	photosystem-ii	−	63533	63656	123
psbL	gene	photosystem-ii	−	63790	63907	117
psbF	gene	photosystem-ii	−	63930	64050	120
psbE	gene	photosystem-ii	−	64064	64316	252
petL	gene	cytochrome	+	65187	65283	96
petG	gene	cytochrome	+	65452	65566	114
trnW-CCA	gene	translation-rna	−	65686	65760	74
trnP-UGG	gene	translation-rna	−	65937	66013	76
psaJ	gene	photosystem-i	+	66299	66434	135
rpl33	gene	ribosomal-protein	+	66894	67098	204
rps18	gene	ribosomal-protein	+	67268	67574	306
rpl20	gene	ribosomal-protein	−	67812	68199	387
rps12	gene	ribosomal-protein	−	69005	97221	28216
rps12	gene	ribosomal-protein	+	69005	138736	69731
clpP1	gene	other	−	69258	71189	1931
psbB	gene	photosystem-ii	+	71640	73167	1527
psbT	gene	photosystem-ii	+	73358	73460	102
psbN	gene	photosystem-ii	−	73528	73660	132
psbH	gene	photosystem-ii	+	73765	73987	222
petB	gene	cytochrome	+	74112	75483	1371
petD	gene	cytochrome	+	75670	76857	1187
rpoA	gene	rna-polymerase	−	77041	78049	1008
rps11	gene	ribosomal-protein	−	78120	78537	417
rpl36	gene	ribosomal-protein	−	78646	78760	114
infA	gene	other	−	78855	79089	234
rps8	gene	ribosomal-protein	−	79213	79618	405
rpl14	gene	ribosomal-protein	−	79802	80171	369
rpl16	gene	ribosomal-protein	−	80302	81584	1282
rps3	gene	ribosomal-protein	−	81728	82391	663
rpl22	gene	ribosomal-protein	−	82375	82843	468
rps19	gene	ribosomal-protein	−	82928	83207	279
rpl2	gene	ribosomal-protein	−	83266	84756	1490
rpl23	gene	ribosomal-protein	−	84774	85056	282
trnM-CAU	gene	translation-rna	−	85220	85295	75
ycf2	gene	other	+	85383	92187	6804
ycf15	gene	other	+	92328	92526	198
trnL-CAA	gene	translation-rna	−	92780	92863	83
ndhB	gene	nad-dehydrogenase	−	93433	95641	2208
rps7	gene	ribosomal-protein	−	95906	96374	468
trnV-GAC	gene	translation-rna	+	98857	98929	72
rrn16	gene	ribosomal-rna	+	99155	100646	1491
trnI	gene	translation-rna	+	100944	101962	1018
trnA-UGC	gene	translation-rna	+	102032	102910	878
rrn23	gene	ribosomal-rna	+	103080	105891	2811
rrn4.5	gene	ribosomal-rna	+	105989	106092	103
rrn5	gene	ribosomal-rna	+	106352	106473	121
trnR-ACG	gene	translation-rna	+	106716	106791	75
trnN-GUU	gene	translation-rna	−	107313	107387	74
ycf1	gene	other	+	107715	108774	1059
ndhF	gene	nad-dehydrogenase	−	108760	110971	2211
rpl32	gene	ribosomal-protein	+	111444	111615	171
trnL-UAG	gene	translation-rna	+	112343	112423	80
ccsA	gene	other	+	112523	113501	978
ndhD	gene	nad-dehydrogenase	−	113732	115235	1503
psaC	gene	photosystem-i	−	115356	115602	246
ndhE	gene	nad-dehydrogenase	−	115842	116148	306
ndhG	gene	nad-dehydrogenase	−	116369	116900	531
ndhI	gene	nad-dehydrogenase	−	117279	117786	507
ndhA	gene	nad-dehydrogenase	−	117861	119949	2088
ndhH	gene	nad-dehydrogenase	−	119950	121186	1236
rps15	gene	ribosomal-protein	−	121231	121504	273
ycf1	gene	other	−	121934	127559	5625
trnN-GUU	gene	translation-rna	+	127776	127850	74
trnR-ACG	gene	translation-rna	−	128372	128447	75
rrn5	gene	ribosomal-rna	−	128690	128811	121
rrn4.5	gene	ribosomal-rna	−	129071	129174	103
rrn23	gene	ribosomal-rna	−	129272	132083	2811
trnA-UGC	gene	translation-rna	−	132253	133131	878
trnI	gene	translation-rna	−	133201	134219	1018
rrn16	gene	ribosomal-rna	−	134517	136008	1491
trnV-GAC	gene	translation-rna	−	136234	136306	72
rps7	gene	ribosomal-protein	+	138789	139257	468
ndhB	gene	nad-dehydrogenase	+	139522	141730	2208
trnL-CAA	gene	translation-rna	+	142300	142383	83
ycf15	gene	other	−	142637	142835	198
ycf2	gene	other	−	142976	149780	6804
trnM-CAU	gene	translation-rna	+	149868	149943	75
rpl23	gene	ribosomal-protein	+	150107	150389	282
rpl2	gene	ribosomal-protein	+	150407	151897	1490
rps19	gene	ribosomal-protein	+	151956	151999	43

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP190944.1DNA · accDPP190944DNA · atpBPP190944DNA · matKPP190944DNA · ndhFPP190944DNA · psbAPP190944DNA · rbcLPP190944DNA · rps12PP190944DNA · ycf1PP190944