Coordinate-aware organelle record

Coleus amboinicus chloroplast genome

Available PX923121.1 152,544 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	379	1438	1059
trnK	gene	translation-rna	−	1668	4250	2582
matK	gene	other	−	1988	3509	1521
rps16	gene	ribosomal-protein	−	4778	5914	1136
trnQ-UUG	gene	translation-rna	−	6908	6980	72
psbK	gene	photosystem-ii	+	7331	7517	186
psbI	gene	photosystem-ii	+	7860	7971	111
trnS-GCU	gene	translation-rna	−	8116	8204	88
trnG-UCC	gene	translation-rna	+	8955	9710	755
trnR-UCU	gene	translation-rna	+	9896	9968	72
atpA	gene	atp-synthase	−	10092	11616	1524
atpF	gene	atp-synthase	−	11712	12966	1254
atpH	gene	atp-synthase	−	13249	13495	246
atpI	gene	atp-synthase	−	14544	15288	744
rps2	gene	ribosomal-protein	−	15514	16225	711
rpoC2	gene	rna-polymerase	−	16434	20604	4170
rpoC1	gene	rna-polymerase	−	20768	23596	2828
rpoB	gene	rna-polymerase	−	23622	26835	3213
trnC-GCA	gene	translation-rna	+	28034	28105	71
petN	gene	cytochrome	+	28267	28357	90
psbM	gene	photosystem-ii	−	29346	29451	105
trnD-GUC	gene	translation-rna	−	29958	30032	74
trnY-GUA	gene	translation-rna	−	30142	30226	84
trnE-UUC	gene	translation-rna	−	30303	30376	73
trnT-GGU	gene	translation-rna	+	30992	31064	72
psbD	gene	photosystem-ii	+	32366	33428	1062
psbC	gene	photosystem-ii	+	33375	34797	1422
trnS-UGA	gene	translation-rna	−	35039	35132	93
psbZ	gene	photosystem-ii	+	35465	35654	189
trnG-GCC	gene	translation-rna	+	35898	35969	71
trnfM-CAU	gene	translation-rna	−	36142	36216	74
rps14	gene	ribosomal-protein	−	36360	36663	303
psaB	gene	photosystem-i	−	36785	38990	2205
psaA	gene	photosystem-i	−	39015	41268	2253
pafI	gene	other	−	42052	44010	1958
trnS-GGA	gene	translation-rna	+	44872	44959	87
rps4	gene	ribosomal-protein	−	45243	45849	606
trnT-UGU	gene	translation-rna	−	46224	46297	73
trnL-UAA	gene	translation-rna	+	46986	47548	562
trnF-GAA	gene	translation-rna	+	47845	47918	73
ndhJ	gene	nad-dehydrogenase	−	48594	49071	477
ndhK	gene	nad-dehydrogenase	−	49181	49859	678
ndhC	gene	nad-dehydrogenase	−	49910	50273	363
trnV-UAC	gene	translation-rna	−	51202	51848	646
trnM-CAU	gene	translation-rna	+	52023	52096	73
atpE	gene	atp-synthase	−	52303	52705	402
atpB	gene	atp-synthase	−	52701	54198	1497
rbcL	gene	other	+	54990	56436	1446
accD	gene	other	+	57111	58587	1476
psaI	gene	photosystem-i	+	59322	59433	111
pafII	gene	other	+	59877	60432	555
cemA	gene	other	+	61086	61776	690
petA	gene	cytochrome	+	61984	62947	963
psbJ	gene	photosystem-ii	−	63942	64065	123
psbL	gene	photosystem-ii	−	64199	64316	117
psbF	gene	photosystem-ii	−	64339	64459	120
psbE	gene	photosystem-ii	−	64473	64725	252
petL	gene	cytochrome	+	65605	65701	96
petG	gene	cytochrome	+	65875	65989	114
trnW-CCA	gene	translation-rna	−	66111	66185	74
trnP-UGG	gene	translation-rna	−	66353	66427	74
psaJ	gene	photosystem-i	+	66715	66850	135
rpl33	gene	ribosomal-protein	+	67304	67505	201
rps18	gene	ribosomal-protein	+	67664	67970	306
rpl20	gene	ribosomal-protein	−	68209	68596	387
rps12	gene	ribosomal-protein	−	69322	97501	28179
rps12	gene	ribosomal-protein	+	69322	139241	69919
clpP1	gene	other	−	69554	71475	1921
psbB	gene	photosystem-ii	+	71947	73474	1527
psbT	gene	photosystem-ii	+	73647	73749	102
pbf1	gene	other	−	73814	73946	132
psbH	gene	photosystem-ii	+	74051	74270	219
petB	gene	cytochrome	+	74403	75756	1353
petD	gene	cytochrome	+	75951	77144	1193
rpoA	gene	rna-polymerase	−	77320	78328	1008
rps11	gene	ribosomal-protein	−	78399	78816	417
rpl36	gene	ribosomal-protein	−	78925	79039	114
infA	gene	other	−	79134	79368	234
rps8	gene	ribosomal-protein	−	79493	79898	405
rpl14	gene	ribosomal-protein	−	80069	80438	369
rpl16	gene	ribosomal-protein	−	80569	81835	1266
rps3	gene	ribosomal-protein	−	81978	82641	663
rpl22	gene	ribosomal-protein	−	82625	83099	474
rps19	gene	ribosomal-protein	−	83168	83447	279
rpl2	gene	ribosomal-protein	−	83514	84988	1474
rpl23	gene	ribosomal-protein	−	85006	85288	282
trnI-CAU	gene	translation-rna	−	85453	85527	74
ycf2	gene	other	+	85621	92455	6834
ycf15	gene	other	+	92596	92794	198
trnL-CAA	gene	translation-rna	−	93054	93135	81
ndhB	gene	nad-dehydrogenase	−	93708	95916	2208
rps7	gene	ribosomal-protein	−	96186	96654	468
trnV-GAC	gene	translation-rna	+	99153	99225	72
rrn16	gene	ribosomal-rna	+	99451	100942	1491
trnI-GAU	gene	translation-rna	+	101239	102260	1021
trnA-UGC	gene	translation-rna	+	102324	103202	878
rrn23	gene	ribosomal-rna	+	103355	106166	2811
rrn4.5	gene	ribosomal-rna	+	106264	106367	103
rrn5	gene	ribosomal-rna	+	106622	106743	121
trnR-ACG	gene	translation-rna	+	106986	107060	74
trnN-GUU	gene	translation-rna	−	107637	107709	72
ycf1	gene	other	+	108050	109181	1131
ndhF	gene	nad-dehydrogenase	−	109074	111306	2232
rpl32	gene	ribosomal-protein	+	111783	111951	168
trnL-UAG	gene	translation-rna	+	112716	112796	80
ccsA	gene	other	+	112886	113852	966
ndhD	gene	nad-dehydrogenase	−	114075	115578	1503
psaC	gene	photosystem-i	−	115695	115941	246
ndhE	gene	nad-dehydrogenase	−	116196	116502	306
ndhG	gene	nad-dehydrogenase	−	116716	117247	531
ndhI	gene	nad-dehydrogenase	−	117613	118120	507
ndhA	gene	nad-dehydrogenase	−	118195	120309	2114
ndhH	gene	nad-dehydrogenase	−	120310	121492	1182
rps15	gene	ribosomal-protein	−	121606	121879	273
ycf1	gene	other	−	122321	127898	5577
trnN-GUU	gene	translation-rna	+	128239	128311	72
trnR-ACG	gene	translation-rna	−	128889	128962	73
rrn5	gene	ribosomal-rna	−	129205	129326	121
rrn4.5	gene	ribosomal-rna	−	129581	129684	103
rrn23	gene	ribosomal-rna	−	129782	132593	2811
trnA-UGC	gene	translation-rna	−	132746	133624	878
trnI-GAU	gene	translation-rna	−	133688	134709	1021
rrn16	gene	ribosomal-rna	−	135006	136497	1491
trnV-GAC	gene	translation-rna	−	136723	136795	72
rps7	gene	ribosomal-protein	+	139294	139762	468
ndhB	gene	nad-dehydrogenase	+	140032	142240	2208
trnL-CAA	gene	translation-rna	+	142813	142894	81
ycf15	gene	other	−	143154	143352	198
ycf2	gene	other	−	143493	150327	6834
trnI-CAU	gene	translation-rna	+	150421	150495	74
rpl23	gene	ribosomal-protein	+	150660	150942	282
rpl2	gene	ribosomal-protein	+	150960	152434	1474

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePX923121.1DNA · accDPX923121DNA · atpBPX923121DNA · matKPX923121DNA · ndhFPX923121DNA · psbAPX923121DNA · rbcLPX923121DNA · rps12PX923121DNA · ycf1PX923121