Coleus amboinicus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX923121.1 · 11–85 bp · −
psbA · PX923121.1 · 380–1,438 bp · −
trnK · PX923121.1 · 1,669–4,250 bp · −
matK · PX923121.1 · 1,989–3,509 bp · −
rps16 · PX923121.1 · 4,779–5,914 bp · −
trnQ-UUG · PX923121.1 · 6,909–6,980 bp · −
trnS-GCU · PX923121.1 · 8,117–8,204 bp · −
atpA · PX923121.1 · 10,093–11,616 bp · −
atpF · PX923121.1 · 11,713–12,966 bp · −
atpH · PX923121.1 · 13,250–13,495 bp · −
atpI · PX923121.1 · 14,545–15,288 bp · −
rps2 · PX923121.1 · 15,515–16,225 bp · −
rpoC2 · PX923121.1 · 16,435–20,604 bp · −
rpoC1 · PX923121.1 · 20,769–23,596 bp · −
rpoB · PX923121.1 · 23,623–26,835 bp · −
psbM · PX923121.1 · 29,347–29,451 bp · −
trnD-GUC · PX923121.1 · 29,959–30,032 bp · −
trnY-GUA · PX923121.1 · 30,143–30,226 bp · −
trnE-UUC · PX923121.1 · 30,304–30,376 bp · −
trnS-UGA · PX923121.1 · 35,040–35,132 bp · −
trnfM-CAU · PX923121.1 · 36,143–36,216 bp · −
rps14 · PX923121.1 · 36,361–36,663 bp · −
psaB · PX923121.1 · 36,786–38,990 bp · −
psaA · PX923121.1 · 39,016–41,268 bp · −
pafI · PX923121.1 · 42,053–44,010 bp · −
rps4 · PX923121.1 · 45,244–45,849 bp · −
trnT-UGU · PX923121.1 · 46,225–46,297 bp · −
ndhJ · PX923121.1 · 48,595–49,071 bp · −
ndhK · PX923121.1 · 49,182–49,859 bp · −
ndhC · PX923121.1 · 49,911–50,273 bp · −
trnV-UAC · PX923121.1 · 51,203–51,848 bp · −
atpE · PX923121.1 · 52,304–52,705 bp · −
atpB · PX923121.1 · 52,702–54,198 bp · −
psbJ · PX923121.1 · 63,943–64,065 bp · −
psbL · PX923121.1 · 64,200–64,316 bp · −
psbF · PX923121.1 · 64,340–64,459 bp · −
psbE · PX923121.1 · 64,474–64,725 bp · −
trnW-CCA · PX923121.1 · 66,112–66,185 bp · −
trnP-UGG · PX923121.1 · 66,354–66,427 bp · −
rpl20 · PX923121.1 · 68,210–68,596 bp · −
rps12 · PX923121.1 · 69,323–69,436 bp · −
rps12 · PX923121.1 · 96,708–97,501 bp · −
clpP1 · PX923121.1 · 69,555–71,475 bp · −
pbf1 · PX923121.1 · 73,815–73,946 bp · −
rpoA · PX923121.1 · 77,321–78,328 bp · −
rps11 · PX923121.1 · 78,400–78,816 bp · −
rpl36 · PX923121.1 · 78,926–79,039 bp · −
infA · PX923121.1 · 79,135–79,368 bp · −
rps8 · PX923121.1 · 79,494–79,898 bp · −
rpl14 · PX923121.1 · 80,070–80,438 bp · −
rpl16 · PX923121.1 · 80,570–81,835 bp · −
rps3 · PX923121.1 · 81,979–82,641 bp · −
rpl22 · PX923121.1 · 82,626–83,099 bp · −
rps19 · PX923121.1 · 83,169–83,447 bp · −
rpl2 · PX923121.1 · 83,515–84,988 bp · −
rpl23 · PX923121.1 · 85,007–85,288 bp · −
trnI-CAU · PX923121.1 · 85,454–85,527 bp · −
trnL-CAA · PX923121.1 · 93,055–93,135 bp · −
ndhB · PX923121.1 · 93,709–95,916 bp · −
rps7 · PX923121.1 · 96,187–96,654 bp · −
trnN-GUU · PX923121.1 · 107,638–107,709 bp · −
ndhF · PX923121.1 · 109,075–111,306 bp · −
ndhD · PX923121.1 · 114,076–115,578 bp · −
psaC · PX923121.1 · 115,696–115,941 bp · −
ndhE · PX923121.1 · 116,197–116,502 bp · −
ndhG · PX923121.1 · 116,717–117,247 bp · −
ndhI · PX923121.1 · 117,614–118,120 bp · −
ndhA · PX923121.1 · 118,196–120,309 bp · −
ndhH · PX923121.1 · 120,311–121,492 bp · −
rps15 · PX923121.1 · 121,607–121,879 bp · −
ycf1 · PX923121.1 · 122,322–127,898 bp · −
trnR-ACG · PX923121.1 · 128,890–128,962 bp · −
rrn5 · PX923121.1 · 129,206–129,326 bp · −
rrn4.5 · PX923121.1 · 129,582–129,684 bp · −
rrn23 · PX923121.1 · 129,783–132,593 bp · −
trnA-UGC · PX923121.1 · 132,747–133,624 bp · −
trnI-GAU · PX923121.1 · 133,689–134,709 bp · −
rrn16 · PX923121.1 · 135,007–136,497 bp · −
trnV-GAC · PX923121.1 · 136,724–136,795 bp · −
ycf15 · PX923121.1 · 143,155–143,352 bp · −
ycf2 · PX923121.1 · 143,494–150,327 bp · −
psbK · PX923121.1 · 7,332–7,517 bp · +
psbI · PX923121.1 · 7,861–7,971 bp · +
trnG-UCC · PX923121.1 · 8,956–9,710 bp · +
trnR-UCU · PX923121.1 · 9,897–9,968 bp · +
trnC-GCA · PX923121.1 · 28,035–28,105 bp · +
petN · PX923121.1 · 28,268–28,357 bp · +
trnT-GGU · PX923121.1 · 30,993–31,064 bp · +
psbD · PX923121.1 · 32,367–33,428 bp · +
psbC · PX923121.1 · 33,376–34,797 bp · +
psbZ · PX923121.1 · 35,466–35,654 bp · +
trnG-GCC · PX923121.1 · 35,899–35,969 bp · +
trnS-GGA · PX923121.1 · 44,873–44,959 bp · +
trnL-UAA · PX923121.1 · 46,987–47,548 bp · +
trnF-GAA · PX923121.1 · 47,846–47,918 bp · +
trnM-CAU · PX923121.1 · 52,024–52,096 bp · +
rbcL · PX923121.1 · 54,991–56,436 bp · +
accD · PX923121.1 · 57,112–58,587 bp · +
psaI · PX923121.1 · 59,323–59,433 bp · +
pafII · PX923121.1 · 59,878–60,432 bp · +
cemA · PX923121.1 · 61,087–61,776 bp · +
petA · PX923121.1 · 61,985–62,947 bp · +
petL · PX923121.1 · 65,606–65,701 bp · +
petG · PX923121.1 · 65,876–65,989 bp · +
psaJ · PX923121.1 · 66,716–66,850 bp · +
rpl33 · PX923121.1 · 67,305–67,505 bp · +
rps18 · PX923121.1 · 67,665–67,970 bp · +
rps12 · PX923121.1 · 138,448–139,241 bp · +
psbB · PX923121.1 · 71,948–73,474 bp · +
psbT · PX923121.1 · 73,648–73,749 bp · +
psbH · PX923121.1 · 74,052–74,270 bp · +
petB · PX923121.1 · 74,404–75,756 bp · +
petD · PX923121.1 · 75,952–77,144 bp · +
ycf2 · PX923121.1 · 85,622–92,455 bp · +
ycf15 · PX923121.1 · 92,597–92,794 bp · +
trnV-GAC · PX923121.1 · 99,154–99,225 bp · +
rrn16 · PX923121.1 · 99,452–100,942 bp · +
trnI-GAU · PX923121.1 · 101,240–102,260 bp · +
trnA-UGC · PX923121.1 · 102,325–103,202 bp · +
rrn23 · PX923121.1 · 103,356–106,166 bp · +
rrn4.5 · PX923121.1 · 106,265–106,367 bp · +
rrn5 · PX923121.1 · 106,623–106,743 bp · +
trnR-ACG · PX923121.1 · 106,987–107,060 bp · +
ycf1 · PX923121.1 · 108,051–109,181 bp · +
rpl32 · PX923121.1 · 111,784–111,951 bp · +
trnL-UAG · PX923121.1 · 112,717–112,796 bp · +
ccsA · PX923121.1 · 112,887–113,852 bp · +
trnN-GUU · PX923121.1 · 128,240–128,311 bp · +
rps7 · PX923121.1 · 139,295–139,762 bp · +
ndhB · PX923121.1 · 140,033–142,240 bp · +
trnL-CAA · PX923121.1 · 142,814–142,894 bp · +
trnI-CAU · PX923121.1 · 150,422–150,495 bp · +
rpl23 · PX923121.1 · 150,661–150,942 bp · +
rpl2 · PX923121.1 · 150,961–152,434 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Coleus amboinicus
ANNOTATED PLASTOME
PX923121.1
152,544 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38136 76272 114408 152544 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 380 1438 1059 Locate
trnK gene − 1669 4250 2582 Locate
matK gene − 1989 3509 1521 Locate
rps16 gene − 4779 5914 1136 Locate
trnQ-UUG gene − 6909 6980 72 Locate
psbK gene + 7332 7517 186 Locate
psbI gene + 7861 7971 111 Locate
trnS-GCU gene − 8117 8204 88 Locate
trnG-UCC gene + 8956 9710 755 Locate
trnR-UCU gene + 9897 9968 72 Locate
atpA gene − 10093 11616 1524 Locate
atpF gene − 11713 12966 1254 Locate
atpH gene − 13250 13495 246 Locate
atpI gene − 14545 15288 744 Locate
rps2 gene − 15515 16225 711 Locate
rpoC2 gene − 16435 20604 4170 Locate
rpoC1 gene − 20769 23596 2828 Locate
rpoB gene − 23623 26835 3213 Locate
trnC-GCA gene + 28035 28105 71 Locate
petN gene + 28268 28357 90 Locate
psbM gene − 29347 29451 105 Locate
trnD-GUC gene − 29959 30032 74 Locate
trnY-GUA gene − 30143 30226 84 Locate
trnE-UUC gene − 30304 30376 73 Locate
trnT-GGU gene + 30993 31064 72 Locate
psbD gene + 32367 33428 1062 Locate
psbC gene + 33376 34797 1422 Locate
trnS-UGA gene − 35040 35132 93 Locate
psbZ gene + 35466 35654 189 Locate
trnG-GCC gene + 35899 35969 71 Locate
trnfM-CAU gene − 36143 36216 74 Locate
rps14 gene − 36361 36663 303 Locate
psaB gene − 36786 38990 2205 Locate
psaA gene − 39016 41268 2253 Locate
pafI gene − 42053 44010 1958 Locate
trnS-GGA gene + 44873 44959 87 Locate
rps4 gene − 45244 45849 606 Locate
trnT-UGU gene − 46225 46297 73 Locate
trnL-UAA gene + 46987 47548 562 Locate
trnF-GAA gene + 47846 47918 73 Locate
ndhJ gene − 48595 49071 477 Locate
ndhK gene − 49182 49859 678 Locate
ndhC gene − 49911 50273 363 Locate
trnV-UAC gene − 51203 51848 646 Locate
trnM-CAU gene + 52024 52096 73 Locate
atpE gene − 52304 52705 402 Locate
atpB gene − 52702 54198 1497 Locate
rbcL gene + 54991 56436 1446 Locate
accD gene + 57112 58587 1476 Locate
psaI gene + 59323 59433 111 Locate
pafII gene + 59878 60432 555 Locate
cemA gene + 61087 61776 690 Locate
petA gene + 61985 62947 963 Locate
psbJ gene − 63943 64065 123 Locate
psbL gene − 64200 64316 117 Locate
psbF gene − 64340 64459 120 Locate
psbE gene − 64474 64725 252 Locate
petL gene + 65606 65701 96 Locate
petG gene + 65876 65989 114 Locate
trnW-CCA gene − 66112 66185 74 Locate
trnP-UGG gene − 66354 66427 74 Locate
psaJ gene + 66716 66850 135 Locate
rpl33 gene + 67305 67505 201 Locate
rps18 gene + 67665 67970 306 Locate
rpl20 gene − 68210 68596 387 Locate
rps12 gene − 69323 69436 114 Locate
clpP1 gene − 69555 71475 1921 Locate
psbB gene + 71948 73474 1527 Locate
psbT gene + 73648 73749 102 Locate
pbf1 gene − 73815 73946 132 Locate
psbH gene + 74052 74270 219 Locate
petB gene + 74404 75756 1353 Locate
petD gene + 75952 77144 1193 Locate
rpoA gene − 77321 78328 1008 Locate
rps11 gene − 78400 78816 417 Locate
rpl36 gene − 78926 79039 114 Locate
infA gene − 79135 79368 234 Locate
rps8 gene − 79494 79898 405 Locate
rpl14 gene − 80070 80438 369 Locate
rpl16 gene − 80570 81835 1266 Locate
rps3 gene − 81979 82641 663 Locate
rpl22 gene − 82626 83099 474 Locate
rps19 gene − 83169 83447 279 Locate
rpl2 gene − 83515 84988 1474 Locate
rpl23 gene − 85007 85288 282 Locate
trnI-CAU gene − 85454 85527 74 Locate
ycf2 gene + 85622 92455 6834 Locate
ycf15 gene + 92597 92794 198 Locate
trnL-CAA gene − 93055 93135 81 Locate
ndhB gene − 93709 95916 2208 Locate
rps7 gene − 96187 96654 468 Locate
rps12 gene − 96708 97501 794 Locate
trnV-GAC gene + 99154 99225 72 Locate
rrn16 gene + 99452 100942 1491 Locate
trnI-GAU gene + 101240 102260 1021 Locate
trnA-UGC gene + 102325 103202 878 Locate
rrn23 gene + 103356 106166 2811 Locate
rrn4.5 gene + 106265 106367 103 Locate
rrn5 gene + 106623 106743 121 Locate
trnR-ACG gene + 106987 107060 74 Locate
trnN-GUU gene − 107638 107709 72 Locate
ycf1 gene + 108051 109181 1131 Locate
ndhF gene − 109075 111306 2232 Locate
rpl32 gene + 111784 111951 168 Locate
trnL-UAG gene + 112717 112796 80 Locate
ccsA gene + 112887 113852 966 Locate
ndhD gene − 114076 115578 1503 Locate
psaC gene − 115696 115941 246 Locate
ndhE gene − 116197 116502 306 Locate
ndhG gene − 116717 117247 531 Locate
ndhI gene − 117614 118120 507 Locate
ndhA gene − 118196 120309 2114 Locate
ndhH gene − 120311 121492 1182 Locate
rps15 gene − 121607 121879 273 Locate
ycf1 gene − 122322 127898 5577 Locate
trnN-GUU gene + 128240 128311 72 Locate
trnR-ACG gene − 128890 128962 73 Locate
rrn5 gene − 129206 129326 121 Locate
rrn4.5 gene − 129582 129684 103 Locate
rrn23 gene − 129783 132593 2811 Locate
trnA-UGC gene − 132747 133624 878 Locate
trnI-GAU gene − 133689 134709 1021 Locate
rrn16 gene − 135007 136497 1491 Locate
trnV-GAC gene − 136724 136795 72 Locate
rps12 gene + 138448 139241 794 Locate
rps7 gene + 139295 139762 468 Locate
ndhB gene + 140033 142240 2208 Locate
trnL-CAA gene + 142814 142894 81 Locate
ycf15 gene − 143155 143352 198 Locate
ycf2 gene − 143494 150327 6834 Locate
trnI-CAU gene + 150422 150495 74 Locate
rpl23 gene + 150661 150942 282 Locate
rpl2 gene + 150961 152434 1474 Locate
Status Available
Accession PX923121.1
Length 152,544 bp
GC content 37.7%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources