Coordinate-aware organelle record

Colquhounia coccinea chloroplast genome

Available NC_058329.1 151,972 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH(GUG)	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	424	1483	1059
trnK(UUU)	gene	translation-rna	−	1715	4305	2590
matK	gene	other	−	2019	3555	1536
rps16	gene	ribosomal-protein	−	5076	6217	1141
trnQ(UUG)	gene	translation-rna	−	7375	7447	72
psbK	gene	photosystem-ii	+	7783	7969	186
psbI	gene	photosystem-ii	+	8346	8457	111
trnS(GCU)	gene	translation-rna	−	8580	8668	88
trnG(UCC)	gene	translation-rna	+	9359	10121	762
trnR(UCU)	gene	translation-rna	+	10294	10369	75
atpA	gene	atp-synthase	−	10465	11989	1524
atpF	gene	atp-synthase	−	12077	13302	1225
atpH	gene	atp-synthase	−	13671	13917	246
atpI	gene	atp-synthase	−	14933	15677	744
rps2	gene	ribosomal-protein	−	15907	16618	711
rpoC2	gene	rna-polymerase	−	16838	21029	4191
rpoC1	gene	rna-polymerase	−	21183	24043	2860
rpoB	gene	rna-polymerase	−	24048	27261	3213
trnC(GCA)	gene	translation-rna	+	28428	28504	76
petN	gene	cytochrome	+	29340	29430	90
psbM	gene	photosystem-ii	−	30219	30324	105
trnD(GUC)	gene	translation-rna	−	30847	30921	74
trnY(GUA)	gene	translation-rna	−	31035	31119	84
trnE(UUC)	gene	translation-rna	−	31178	31248	70
trnT(GGU)	gene	translation-rna	−	31811	31884	73
psbD	gene	photosystem-ii	+	33108	34170	1062
psbC	gene	photosystem-ii	+	34117	35539	1422
trnS(UGA)	gene	translation-rna	−	35769	35862	93
psbZ	gene	photosystem-ii	+	36187	36376	189
trnG(GCC)	gene	translation-rna	+	36599	36670	71
trnfM(CAU)	gene	translation-rna	−	36819	36893	74
rps14	gene	ribosomal-protein	−	37042	37345	303
psaB	gene	photosystem-i	−	37472	39677	2205
psaA	gene	photosystem-i	−	39702	41955	2253
ycf3	gene	other	−	42683	44630	1947
trnS(GGA)	gene	translation-rna	+	44956	45043	87
rps4	gene	ribosomal-protein	−	45332	45938	606
trnT(UGU)	gene	translation-rna	−	46330	46403	73
trnL(UAA)	gene	translation-rna	+	47096	47670	574
trnF(GAA)	gene	translation-rna	+	47969	48042	73
ndhJ	gene	nad-dehydrogenase	−	48706	49183	477
ndhK	gene	nad-dehydrogenase	−	49283	49961	678
ndhC	gene	nad-dehydrogenase	−	50014	50377	363
trnV(UAC)	gene	translation-rna	−	51321	51974	653
trnM(CAU)	gene	translation-rna	+	52162	52235	73
atpE	gene	atp-synthase	−	52459	52861	402
atpB	gene	atp-synthase	−	52857	54360	1503
rbcL	gene	other	+	55163	56609	1446
accD	gene	other	+	57298	58765	1467
psaI	gene	photosystem-i	+	59451	59562	111
ycf4	gene	other	+	59995	60550	555
cemA	gene	other	+	61105	61795	690
petA	gene	cytochrome	+	62011	62974	963
psbJ	gene	photosystem-ii	−	64025	64148	123
psbL	gene	photosystem-ii	−	64285	64402	117
psbF	gene	photosystem-ii	−	64425	64545	120
psbE	gene	photosystem-ii	−	64559	64811	252
petL	gene	cytochrome	+	65340	65436	96
petG	gene	cytochrome	+	65610	65724	114
trnW(CCA)	gene	translation-rna	−	65849	65923	74
trnP(UGG)	gene	translation-rna	−	66092	66166	74
psaJ	gene	photosystem-i	+	66441	66576	135
rpl33	gene	ribosomal-protein	+	67046	67247	201
rps18	gene	ribosomal-protein	+	67417	67723	306
rpl20	gene	ribosomal-protein	−	67940	68327	387
rps12	gene	ribosomal-protein	−	69087	97229	28142
rps12	gene	ribosomal-protein	+	69087	138709	69622
clpP	gene	other	−	69328	71206	1878
psbB	gene	photosystem-ii	+	71643	73170	1527
psbT	gene	photosystem-ii	+	73358	73466	108
psbN	gene	photosystem-ii	−	73526	73658	132
psbH	gene	photosystem-ii	+	73761	73983	222
petB	gene	cytochrome	+	74107	75487	1380
petD	gene	cytochrome	+	75681	76895	1214
rpoA	gene	rna-polymerase	−	77057	78071	1014
rps11	gene	ribosomal-protein	−	78142	78559	417
rpl36	gene	ribosomal-protein	−	78661	78775	114
infA	gene	other	−	78870	79104	234
rps8	gene	ribosomal-protein	−	79227	79641	414
rpl14	gene	ribosomal-protein	−	79815	80184	369
rpl16	gene	ribosomal-protein	−	80310	81618	1308
rps3	gene	ribosomal-protein	−	81764	82427	663
rpl22	gene	ribosomal-protein	−	82411	82876	465
rps19	gene	ribosomal-protein	−	82935	83214	279
rpl2	gene	ribosomal-protein	−	83266	84758	1492
rpl23	gene	ribosomal-protein	−	84776	85058	282
trnI(CAU)	gene	translation-rna	−	85223	85297	74
ycf2	gene	other	+	85385	92252	6867
ycf15	gene	other	+	92294	92543	249
trnL(CAA)	gene	translation-rna	−	92803	92884	81
ndhB	gene	nad-dehydrogenase	−	93428	95640	2212
rps7	gene	ribosomal-protein	−	95914	96382	468
trnV(GAC)	gene	translation-rna	+	98845	98917	72
rrn16S	gene	ribosomal-rna	+	99144	100635	1491
trnI(GAU)	gene	translation-rna	+	100924	101932	1008
trnA(UGC)	gene	translation-rna	+	101996	102875	879
rrn23S	gene	ribosomal-rna	+	103066	105877	2811
rrn4.5S	gene	ribosomal-rna	+	105975	106078	103
rrn5S	gene	ribosomal-rna	+	106333	106454	121
trnR(ACG)	gene	translation-rna	+	106688	106761	73
trnN(GUU)	gene	translation-rna	−	107334	107406	72
ycf1	gene	other	+	107731	108850	1119
ndhF	gene	nad-dehydrogenase	−	108795	111018	2223
rpl32	gene	ribosomal-protein	+	111350	111527	177
trnL(UAG)	gene	translation-rna	+	112253	112333	80
ccsA	gene	other	+	112416	113388	972
ndhD	gene	nad-dehydrogenase	−	113569	115090	1521
psaC	gene	photosystem-i	−	115197	115443	246
ndhE	gene	nad-dehydrogenase	−	115705	116011	306
ndhG	gene	nad-dehydrogenase	−	116226	116757	531
ndhI	gene	nad-dehydrogenase	−	117136	117643	507
ndhA	gene	nad-dehydrogenase	−	117723	119897	2174
ndhH	gene	nad-dehydrogenase	−	119898	121080	1182
rps15	gene	ribosomal-protein	−	121180	121453	273
ycf1	gene	other	−	121854	127413	5559
trnN(GUU)	gene	translation-rna	+	127738	127810	72
trnR(ACG)	gene	translation-rna	−	128383	128456	73
rrn5S	gene	ribosomal-rna	−	128690	128811	121
rrn4.5S	gene	ribosomal-rna	−	129066	129169	103
rrn23S	gene	ribosomal-rna	−	129267	132078	2811
trnA(UGC)	gene	translation-rna	−	132269	133148	879
trnI(GAU)	gene	translation-rna	−	133212	134220	1008
rrn16S	gene	ribosomal-rna	−	134509	136000	1491
trnV(GAC)	gene	translation-rna	−	136227	136299	72
rps7	gene	ribosomal-protein	+	138762	139230	468
ndhB	gene	nad-dehydrogenase	+	139504	141716	2212
trnL(CAA)	gene	translation-rna	+	142260	142341	81
ycf15	gene	other	−	142601	142850	249
ycf2	gene	other	−	142892	149759	6867
trnI(CAU)	gene	translation-rna	+	149847	149921	74
rpl23	gene	ribosomal-protein	+	150086	150368	282
rpl2	gene	ribosomal-protein	+	150386	151878	1492
rps19	gene	ribosomal-protein	+	151930	151972	42

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_058329.1DNA · accDNC_058329DNA · atpBNC_058329DNA · matKNC_058329DNA · ndhFNC_058329DNA · psbANC_058329DNA · rbcLNC_058329DNA · rps12NC_058329DNA · ycf1NC_058329