Galeopsis pubescens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP190947.1 · 1–75 bp · −
psbA · PP190947.1 · 386–1,444 bp · −
trnK-UUU · PP190947.1 · 1,675–4,264 bp · −
matK · PP190947.1 · 1,979–3,514 bp · −
rps16 · PP190947.1 · 5,194–6,358 bp · −
trnQ-UUG · PP190947.1 · 6,999–7,070 bp · −
trnS-GCU · PP190947.1 · 8,212–8,299 bp · −
atpA · PP190947.1 · 10,029–11,552 bp · −
atpF · PP190947.1 · 11,641–12,871 bp · −
atpH · PP190947.1 · 13,224–13,469 bp · −
atpI · PP190947.1 · 14,469–15,212 bp · −
rps2 · PP190947.1 · 15,437–16,147 bp · −
rpoC2 · PP190947.1 · 16,362–20,534 bp · −
rpoC1 · PP190947.1 · 20,701–23,538 bp · −
rpoB · PP190947.1 · 23,565–26,777 bp · −
psbM · PP190947.1 · 29,640–29,744 bp · −
trnD-GUC · PP190947.1 · 30,266–30,342 bp · −
trnY-GUA · PP190947.1 · 30,456–30,541 bp · −
trnE-UUC · PP190947.1 · 30,600–30,672 bp · −
trnS-UGA · PP190947.1 · 35,229–35,321 bp · −
trnM-CAU · PP190947.1 · 36,280–36,354 bp · −
rps14 · PP190947.1 · 36,504–36,806 bp · −
psaB · PP190947.1 · 36,934–39,138 bp · −
psaA · PP190947.1 · 39,164–41,416 bp · −
ycf3 · PP190947.1 · 42,130–44,079 bp · −
rps4 · PP190947.1 · 44,764–45,369 bp · −
trnT-UGU · PP190947.1 · 45,763–45,837 bp · −
ndhJ · PP190947.1 · 48,104–48,580 bp · −
ndhK · PP190947.1 · 48,681–49,358 bp · −
ndhC · PP190947.1 · 49,412–49,774 bp · −
trnV-UAC · PP190947.1 · 50,716–51,363 bp · −
atpE · PP190947.1 · 51,840–52,241 bp · −
atpB · PP190947.1 · 52,238–53,734 bp · −
psbJ · PP190947.1 · 63,102–63,224 bp · −
psbL · PP190947.1 · 63,362–63,478 bp · −
psbF · PP190947.1 · 63,502–63,621 bp · −
psbE · PP190947.1 · 63,636–63,887 bp · −
trnW-CCA · PP190947.1 · 65,076–65,149 bp · −
trnP-UGG · PP190947.1 · 65,306–65,381 bp · −
rpl20 · PP190947.1 · 67,146–67,532 bp · −
rps12 · PP190947.1 · 68,299–68,412 bp · −
rps12 · PP190947.1 · 95,624–96,417 bp · −
clpP1 · PP190947.1 · 68,538–70,417 bp · −
psbN · PP190947.1 · 72,742–72,873 bp · −
rpoA · PP190947.1 · 76,296–77,309 bp · −
rps11 · PP190947.1 · 77,381–77,797 bp · −
rpl36 · PP190947.1 · 77,915–78,028 bp · −
infA · PP190947.1 · 78,124–78,357 bp · −
rps8 · PP190947.1 · 78,480–78,893 bp · −
rpl14 · PP190947.1 · 79,071–79,439 bp · −
rpl16 · PP190947.1 · 79,566–80,871 bp · −
rps3 · PP190947.1 · 81,018–81,680 bp · −
rpl22 · PP190947.1 · 81,665–82,120 bp · −
rps19 · PP190947.1 · 82,184–82,462 bp · −
rpl2 · PP190947.1 · 82,514–84,005 bp · −
rpl23 · PP190947.1 · 84,024–84,305 bp · −
trnM-CAU · PP190947.1 · 84,470–84,544 bp · −
trnL-CAA · PP190947.1 · 92,002–92,084 bp · −
ndhB · PP190947.1 · 92,628–94,839 bp · −
rps7 · PP190947.1 · 95,103–95,570 bp · −
trnN-GUU · PP190947.1 · 106,478–106,551 bp · −
ndhF · PP190947.1 · 107,940–110,162 bp · −
ndhD · PP190947.1 · 112,906–114,408 bp · −
psaC · PP190947.1 · 114,522–114,767 bp · −
ndhE · PP190947.1 · 115,017–115,322 bp · −
ndhG · PP190947.1 · 115,532–116,062 bp · −
ndhI · PP190947.1 · 116,430–116,936 bp · −
ndhA · PP190947.1 · 117,016–119,159 bp · −
ndhH · PP190947.1 · 119,161–120,342 bp · −
rps15 · PP190947.1 · 120,443–120,715 bp · −
ycf1 · PP190947.1 · 121,122–126,653 bp · −
trnR-ACG · PP190947.1 · 127,578–127,652 bp · −
rrn5 · PP190947.1 · 127,887–128,007 bp · −
rrn4.5 · PP190947.1 · 128,263–128,365 bp · −
rrn23 · PP190947.1 · 128,464–131,274 bp · −
trnA-UGC · PP190947.1 · 131,466–132,344 bp · −
trnI · PP190947.1 · 132,409–133,417 bp · −
rrn16 · PP190947.1 · 133,707–135,197 bp · −
trnV-GAC · PP190947.1 · 135,424–135,495 bp · −
ycf15 · PP190947.1 · 141,787–142,035 bp · −
ycf2 · PP190947.1 · 142,078–148,896 bp · −
psbK · PP190947.1 · 7,407–7,592 bp · +
psbI · PP190947.1 · 7,971–8,081 bp · +
trnG-UCC · PP190947.1 · 8,923–9,684 bp · +
trnR-UCU · PP190947.1 · 9,858–9,932 bp · +
trnC-GCA · PP190947.1 · 27,872–27,947 bp · +
petN · PP190947.1 · 28,775–28,864 bp · +
trnT-GGU · PP190947.1 · 31,248–31,321 bp · +
psbD · PP190947.1 · 32,554–33,615 bp · +
psbC · PP190947.1 · 33,563–34,984 bp · +
psbZ · PP190947.1 · 35,646–35,834 bp · +
trnG-GCC · PP190947.1 · 36,064–36,135 bp · +
trnS-GGA · PP190947.1 · 44,393–44,479 bp · +
trnL-UAA · PP190947.1 · 46,506–47,078 bp · +
trnF-GAA · PP190947.1 · 47,371–47,444 bp · +
trnM-CAU · PP190947.1 · 51,552–51,624 bp · +
rbcL · PP190947.1 · 54,528–55,973 bp · +
accD · PP190947.1 · 56,654–58,120 bp · +
psaI · PP190947.1 · 58,808–58,918 bp · +
ycf4 · PP190947.1 · 59,235–59,789 bp · +
cemA · PP190947.1 · 60,190–60,879 bp · +
petA · PP190947.1 · 61,096–62,058 bp · +
petL · PP190947.1 · 64,567–64,662 bp · +
petG · PP190947.1 · 64,837–64,950 bp · +
psaJ · PP190947.1 · 65,656–65,790 bp · +
rpl33 · PP190947.1 · 66,275–66,475 bp · +
rps18 · PP190947.1 · 66,622–66,927 bp · +
rps12 · PP190947.1 · 137,112–137,905 bp · +
psbB · PP190947.1 · 70,857–72,383 bp · +
psbT · PP190947.1 · 72,574–72,681 bp · +
psbH · PP190947.1 · 72,977–73,198 bp · +
petB · PP190947.1 · 73,323–74,712 bp · +
petD · PP190947.1 · 74,907–76,135 bp · +
ycf2 · PP190947.1 · 84,633–91,451 bp · +
ycf15 · PP190947.1 · 91,494–91,742 bp · +
trnV-GAC · PP190947.1 · 98,034–98,105 bp · +
rrn16 · PP190947.1 · 98,332–99,822 bp · +
trnI · PP190947.1 · 100,112–101,120 bp · +
trnA-UGC · PP190947.1 · 101,185–102,063 bp · +
rrn23 · PP190947.1 · 102,255–105,065 bp · +
rrn4.5 · PP190947.1 · 105,164–105,266 bp · +
rrn5 · PP190947.1 · 105,522–105,642 bp · +
trnR-ACG · PP190947.1 · 105,877–105,951 bp · +
ycf1 · PP190947.1 · 106,876–107,994 bp · +
rpl32 · PP190947.1 · 110,657–110,833 bp · +
trnL-UAG · PP190947.1 · 111,587–111,666 bp · +
ccsA · PP190947.1 · 111,753–112,724 bp · +
trnN-GUU · PP190947.1 · 126,978–127,051 bp · +
rps7 · PP190947.1 · 137,959–138,426 bp · +
ndhB · PP190947.1 · 138,690–140,901 bp · +
trnL-CAA · PP190947.1 · 141,445–141,527 bp · +
trnM-CAU · PP190947.1 · 148,985–149,059 bp · +
rpl23 · PP190947.1 · 149,224–149,505 bp · +
rpl2 · PP190947.1 · 149,524–151,015 bp · +
rps19 · PP190947.1 · 151,067–151,108 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Galeopsis pubescens
ANNOTATED PLASTOME
PP190947.1
151,108 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37777 75554 113331 151108 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 1 75 75 Locate
psbA gene − 386 1444 1059 Locate
trnK-UUU gene − 1675 4264 2590 Locate
matK gene − 1979 3514 1536 Locate
rps16 gene − 5194 6358 1165 Locate
trnQ-UUG gene − 6999 7070 72 Locate
psbK gene + 7407 7592 186 Locate
psbI gene + 7971 8081 111 Locate
trnS-GCU gene − 8212 8299 88 Locate
trnG-UCC gene + 8923 9684 762 Locate
trnR-UCU gene + 9858 9932 75 Locate
atpA gene − 10029 11552 1524 Locate
atpF gene − 11641 12871 1231 Locate
atpH gene − 13224 13469 246 Locate
atpI gene − 14469 15212 744 Locate
rps2 gene − 15437 16147 711 Locate
rpoC2 gene − 16362 20534 4173 Locate
rpoC1 gene − 20701 23538 2838 Locate
rpoB gene − 23565 26777 3213 Locate
trnC-GCA gene + 27872 27947 76 Locate
petN gene + 28775 28864 90 Locate
psbM gene − 29640 29744 105 Locate
trnD-GUC gene − 30266 30342 77 Locate
trnY-GUA gene − 30456 30541 86 Locate
trnE-UUC gene − 30600 30672 73 Locate
trnT-GGU gene + 31248 31321 74 Locate
psbD gene + 32554 33615 1062 Locate
psbC gene + 33563 34984 1422 Locate
trnS-UGA gene − 35229 35321 93 Locate
psbZ gene + 35646 35834 189 Locate
trnG-GCC gene + 36064 36135 72 Locate
trnM-CAU gene − 36280 36354 75 Locate
rps14 gene − 36504 36806 303 Locate
psaB gene − 36934 39138 2205 Locate
psaA gene − 39164 41416 2253 Locate
ycf3 gene − 42130 44079 1950 Locate
trnS-GGA gene + 44393 44479 87 Locate
rps4 gene − 44764 45369 606 Locate
trnT-UGU gene − 45763 45837 75 Locate
trnL-UAA gene + 46506 47078 573 Locate
trnF-GAA gene + 47371 47444 74 Locate
ndhJ gene − 48104 48580 477 Locate
ndhK gene − 48681 49358 678 Locate
ndhC gene − 49412 49774 363 Locate
trnV-UAC gene − 50716 51363 648 Locate
trnM-CAU gene + 51552 51624 73 Locate
atpE gene − 51840 52241 402 Locate
atpB gene − 52238 53734 1497 Locate
rbcL gene + 54528 55973 1446 Locate
accD gene + 56654 58120 1467 Locate
psaI gene + 58808 58918 111 Locate
ycf4 gene + 59235 59789 555 Locate
cemA gene + 60190 60879 690 Locate
petA gene + 61096 62058 963 Locate
psbJ gene − 63102 63224 123 Locate
psbL gene − 63362 63478 117 Locate
psbF gene − 63502 63621 120 Locate
psbE gene − 63636 63887 252 Locate
petL gene + 64567 64662 96 Locate
petG gene + 64837 64950 114 Locate
trnW-CCA gene − 65076 65149 74 Locate
trnP-UGG gene − 65306 65381 76 Locate
psaJ gene + 65656 65790 135 Locate
rpl33 gene + 66275 66475 201 Locate
rps18 gene + 66622 66927 306 Locate
rpl20 gene − 67146 67532 387 Locate
rps12 gene − 68299 68412 114 Locate
clpP1 gene − 68538 70417 1880 Locate
psbB gene + 70857 72383 1527 Locate
psbT gene + 72574 72681 108 Locate
psbN gene − 72742 72873 132 Locate
psbH gene + 72977 73198 222 Locate
petB gene + 73323 74712 1390 Locate
petD gene + 74907 76135 1229 Locate
rpoA gene − 76296 77309 1014 Locate
rps11 gene − 77381 77797 417 Locate
rpl36 gene − 77915 78028 114 Locate
infA gene − 78124 78357 234 Locate
rps8 gene − 78480 78893 414 Locate
rpl14 gene − 79071 79439 369 Locate
rpl16 gene − 79566 80871 1306 Locate
rps3 gene − 81018 81680 663 Locate
rpl22 gene − 81665 82120 456 Locate
rps19 gene − 82184 82462 279 Locate
rpl2 gene − 82514 84005 1492 Locate
rpl23 gene − 84024 84305 282 Locate
trnM-CAU gene − 84470 84544 75 Locate
ycf2 gene + 84633 91451 6819 Locate
ycf15 gene + 91494 91742 249 Locate
trnL-CAA gene − 92002 92084 83 Locate
ndhB gene − 92628 94839 2212 Locate
rps7 gene − 95103 95570 468 Locate
rps12 gene − 95624 96417 794 Locate
trnV-GAC gene + 98034 98105 72 Locate
rrn16 gene + 98332 99822 1491 Locate
trnI gene + 100112 101120 1009 Locate
trnA-UGC gene + 101185 102063 879 Locate
rrn23 gene + 102255 105065 2811 Locate
rrn4.5 gene + 105164 105266 103 Locate
rrn5 gene + 105522 105642 121 Locate
trnR-ACG gene + 105877 105951 75 Locate
trnN-GUU gene − 106478 106551 74 Locate
ycf1 gene + 106876 107994 1119 Locate
ndhF gene − 107940 110162 2223 Locate
rpl32 gene + 110657 110833 177 Locate
trnL-UAG gene + 111587 111666 80 Locate
ccsA gene + 111753 112724 972 Locate
ndhD gene − 112906 114408 1503 Locate
psaC gene − 114522 114767 246 Locate
ndhE gene − 115017 115322 306 Locate
ndhG gene − 115532 116062 531 Locate
ndhI gene − 116430 116936 507 Locate
ndhA gene − 117016 119159 2144 Locate
ndhH gene − 119161 120342 1182 Locate
rps15 gene − 120443 120715 273 Locate
ycf1 gene − 121122 126653 5532 Locate
trnN-GUU gene + 126978 127051 74 Locate
trnR-ACG gene − 127578 127652 75 Locate
rrn5 gene − 127887 128007 121 Locate
rrn4.5 gene − 128263 128365 103 Locate
rrn23 gene − 128464 131274 2811 Locate
trnA-UGC gene − 131466 132344 879 Locate
trnI gene − 132409 133417 1009 Locate
rrn16 gene − 133707 135197 1491 Locate
trnV-GAC gene − 135424 135495 72 Locate
rps12 gene + 137112 137905 794 Locate
rps7 gene + 137959 138426 468 Locate
ndhB gene + 138690 140901 2212 Locate
trnL-CAA gene + 141445 141527 83 Locate
ycf15 gene − 141787 142035 249 Locate
ycf2 gene − 142078 148896 6819 Locate
trnM-CAU gene + 148985 149059 75 Locate
rpl23 gene + 149224 149505 282 Locate
rpl2 gene + 149524 151015 1492 Locate
rps19 gene + 151067 151108 42 Locate
Status Available
Accession PP190947.1
Length 151,108 bp
GC content 38.5%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources