Galeopsis tetrahit chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP190948.1 · 1–75 bp · −
psbA · PP190948.1 · 381–1,439 bp · −
trnK-UUU · PP190948.1 · 1,670–4,263 bp · −
matK · PP190948.1 · 1,974–3,509 bp · −
rps16 · PP190948.1 · 5,180–6,359 bp · −
trnQ-UUG · PP190948.1 · 7,471–7,542 bp · −
trnS-GCU · PP190948.1 · 8,677–8,764 bp · −
atpA · PP190948.1 · 10,496–12,019 bp · −
atpF · PP190948.1 · 12,108–13,330 bp · −
atpH · PP190948.1 · 13,682–13,927 bp · −
atpI · PP190948.1 · 14,926–15,669 bp · −
rps2 · PP190948.1 · 15,900–16,610 bp · −
rpoC2 · PP190948.1 · 16,829–21,001 bp · −
rpoC1 · PP190948.1 · 21,168–24,008 bp · −
rpoB · PP190948.1 · 24,035–27,247 bp · −
psbM · PP190948.1 · 30,151–30,255 bp · −
trnD-GUC · PP190948.1 · 30,777–30,853 bp · −
trnY-GUA · PP190948.1 · 30,967–31,052 bp · −
trnE-UUC · PP190948.1 · 31,111–31,183 bp · −
trnS-UGA · PP190948.1 · 35,783–35,875 bp · −
trnM-CAU · PP190948.1 · 36,834–36,908 bp · −
rps14 · PP190948.1 · 37,058–37,360 bp · −
psaB · PP190948.1 · 37,488–39,692 bp · −
psaA · PP190948.1 · 39,718–41,970 bp · −
ycf3 · PP190948.1 · 42,689–44,633 bp · −
rps4 · PP190948.1 · 45,329–45,934 bp · −
trnT-UGU · PP190948.1 · 46,329–46,403 bp · −
ndhJ · PP190948.1 · 48,685–49,161 bp · −
ndhK · PP190948.1 · 49,262–49,939 bp · −
ndhC · PP190948.1 · 49,993–50,355 bp · −
trnV-UAC · PP190948.1 · 51,295–51,942 bp · −
atpE · PP190948.1 · 52,419–52,820 bp · −
atpB · PP190948.1 · 52,817–54,313 bp · −
psbJ · PP190948.1 · 63,652–63,774 bp · −
psbL · PP190948.1 · 63,912–64,028 bp · −
psbF · PP190948.1 · 64,052–64,171 bp · −
psbE · PP190948.1 · 64,186–64,437 bp · −
trnW-CCA · PP190948.1 · 65,619–65,692 bp · −
trnP-UGG · PP190948.1 · 65,859–65,934 bp · −
rpl20 · PP190948.1 · 67,681–68,067 bp · −
rps12 · PP190948.1 · 68,833–68,946 bp · −
rps12 · PP190948.1 · 96,150–96,943 bp · −
clpP1 · PP190948.1 · 69,093–70,967 bp · −
psbN · PP190948.1 · 73,298–73,429 bp · −
rpoA · PP190948.1 · 76,839–77,852 bp · −
rps11 · PP190948.1 · 77,924–78,340 bp · −
rpl36 · PP190948.1 · 78,443–78,556 bp · −
infA · PP190948.1 · 78,652–78,885 bp · −
rps8 · PP190948.1 · 79,009–79,422 bp · −
rpl14 · PP190948.1 · 79,589–79,957 bp · −
rpl16 · PP190948.1 · 80,084–81,389 bp · −
rps3 · PP190948.1 · 81,536–82,198 bp · −
rpl22 · PP190948.1 · 82,183–82,638 bp · −
rps19 · PP190948.1 · 82,702–82,980 bp · −
rpl2 · PP190948.1 · 83,032–84,523 bp · −
rpl23 · PP190948.1 · 84,542–84,823 bp · −
trnM-CAU · PP190948.1 · 84,988–85,062 bp · −
trnL-CAA · PP190948.1 · 92,517–92,599 bp · −
ndhB · PP190948.1 · 93,143–95,354 bp · −
rps7 · PP190948.1 · 95,629–96,096 bp · −
trnN-GUU · PP190948.1 · 107,063–107,136 bp · −
ndhF · PP190948.1 · 108,525–110,753 bp · −
ndhD · PP190948.1 · 113,481–114,983 bp · −
psaC · PP190948.1 · 115,097–115,342 bp · −
ndhE · PP190948.1 · 115,592–115,897 bp · −
ndhG · PP190948.1 · 116,097–116,627 bp · −
ndhI · PP190948.1 · 116,994–117,500 bp · −
ndhA · PP190948.1 · 117,580–119,723 bp · −
ndhH · PP190948.1 · 119,725–120,906 bp · −
rps15 · PP190948.1 · 121,007–121,279 bp · −
ycf1 · PP190948.1 · 121,690–127,278 bp · −
trnR-ACG · PP190948.1 · 128,240–128,314 bp · −
rrn5 · PP190948.1 · 128,549–128,669 bp · −
rrn4.5 · PP190948.1 · 128,925–129,027 bp · −
rrn23 · PP190948.1 · 129,126–131,936 bp · −
trnA-UGC · PP190948.1 · 132,128–133,006 bp · −
trnI · PP190948.1 · 133,071–134,079 bp · −
rrn16 · PP190948.1 · 134,369–135,859 bp · −
trnV-GAC · PP190948.1 · 136,086–136,157 bp · −
ycf15 · PP190948.1 · 142,482–142,730 bp · −
ycf2 · PP190948.1 · 142,773–149,588 bp · −
psbK · PP190948.1 · 7,879–8,064 bp · +
psbI · PP190948.1 · 8,441–8,551 bp · +
trnG-UCC · PP190948.1 · 9,391–10,151 bp · +
trnR-UCU · PP190948.1 · 10,325–10,399 bp · +
trnC-GCA · PP190948.1 · 28,372–28,447 bp · +
petN · PP190948.1 · 29,280–29,369 bp · +
trnT-GGU · PP190948.1 · 31,807–31,880 bp · +
psbD · PP190948.1 · 33,108–34,169 bp · +
psbC · PP190948.1 · 34,117–35,538 bp · +
psbZ · PP190948.1 · 36,200–36,388 bp · +
trnG-GCC · PP190948.1 · 36,618–36,689 bp · +
trnS-GGA · PP190948.1 · 44,959–45,045 bp · +
trnL-UAA · PP190948.1 · 47,081–47,659 bp · +
trnF-GAA · PP190948.1 · 47,952–48,025 bp · +
trnM-CAU · PP190948.1 · 52,131–52,203 bp · +
rbcL · PP190948.1 · 55,108–56,553 bp · +
accD · PP190948.1 · 57,234–58,700 bp · +
psaI · PP190948.1 · 59,388–59,498 bp · +
ycf4 · PP190948.1 · 59,815–60,369 bp · +
cemA · PP190948.1 · 60,748–61,437 bp · +
petA · PP190948.1 · 61,654–62,616 bp · +
petL · PP190948.1 · 65,109–65,204 bp · +
petG · PP190948.1 · 65,380–65,493 bp · +
psaJ · PP190948.1 · 66,209–66,343 bp · +
rpl33 · PP190948.1 · 66,798–66,998 bp · +
rps18 · PP190948.1 · 67,157–67,462 bp · +
rps12 · PP190948.1 · 137,796–138,589 bp · +
psbB · PP190948.1 · 71,407–72,933 bp · +
psbT · PP190948.1 · 73,130–73,237 bp · +
psbH · PP190948.1 · 73,533–73,754 bp · +
petB · PP190948.1 · 73,879–75,262 bp · +
petD · PP190948.1 · 75,457–76,676 bp · +
ycf2 · PP190948.1 · 85,151–91,966 bp · +
ycf15 · PP190948.1 · 92,009–92,257 bp · +
trnV-GAC · PP190948.1 · 98,582–98,653 bp · +
rrn16 · PP190948.1 · 98,880–100,370 bp · +
trnI · PP190948.1 · 100,660–101,668 bp · +
trnA-UGC · PP190948.1 · 101,733–102,611 bp · +
rrn23 · PP190948.1 · 102,803–105,613 bp · +
rrn4.5 · PP190948.1 · 105,712–105,814 bp · +
rrn5 · PP190948.1 · 106,070–106,190 bp · +
trnR-ACG · PP190948.1 · 106,425–106,499 bp · +
ycf1 · PP190948.1 · 107,461–108,579 bp · +
rpl32 · PP190948.1 · 111,251–111,427 bp · +
trnL-UAG · PP190948.1 · 112,162–112,241 bp · +
ccsA · PP190948.1 · 112,328–113,299 bp · +
trnN-GUU · PP190948.1 · 127,603–127,676 bp · +
rps7 · PP190948.1 · 138,643–139,110 bp · +
ndhB · PP190948.1 · 139,385–141,596 bp · +
trnL-CAA · PP190948.1 · 142,140–142,222 bp · +
trnM-CAU · PP190948.1 · 149,677–149,751 bp · +
rpl23 · PP190948.1 · 149,916–150,197 bp · +
rpl2 · PP190948.1 · 150,216–151,707 bp · +
rps19 · PP190948.1 · 151,759–151,800 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Galeopsis tetrahit
ANNOTATED PLASTOME
PP190948.1
151,800 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37950 75900 113850 151800 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 1 75 75 Locate
psbA gene − 381 1439 1059 Locate
trnK-UUU gene − 1670 4263 2594 Locate
matK gene − 1974 3509 1536 Locate
rps16 gene − 5180 6359 1180 Locate
trnQ-UUG gene − 7471 7542 72 Locate
psbK gene + 7879 8064 186 Locate
psbI gene + 8441 8551 111 Locate
trnS-GCU gene − 8677 8764 88 Locate
trnG-UCC gene + 9391 10151 761 Locate
trnR-UCU gene + 10325 10399 75 Locate
atpA gene − 10496 12019 1524 Locate
atpF gene − 12108 13330 1223 Locate
atpH gene − 13682 13927 246 Locate
atpI gene − 14926 15669 744 Locate
rps2 gene − 15900 16610 711 Locate
rpoC2 gene − 16829 21001 4173 Locate
rpoC1 gene − 21168 24008 2841 Locate
rpoB gene − 24035 27247 3213 Locate
trnC-GCA gene + 28372 28447 76 Locate
petN gene + 29280 29369 90 Locate
psbM gene − 30151 30255 105 Locate
trnD-GUC gene − 30777 30853 77 Locate
trnY-GUA gene − 30967 31052 86 Locate
trnE-UUC gene − 31111 31183 73 Locate
trnT-GGU gene + 31807 31880 74 Locate
psbD gene + 33108 34169 1062 Locate
psbC gene + 34117 35538 1422 Locate
trnS-UGA gene − 35783 35875 93 Locate
psbZ gene + 36200 36388 189 Locate
trnG-GCC gene + 36618 36689 72 Locate
trnM-CAU gene − 36834 36908 75 Locate
rps14 gene − 37058 37360 303 Locate
psaB gene − 37488 39692 2205 Locate
psaA gene − 39718 41970 2253 Locate
ycf3 gene − 42689 44633 1945 Locate
trnS-GGA gene + 44959 45045 87 Locate
rps4 gene − 45329 45934 606 Locate
trnT-UGU gene − 46329 46403 75 Locate
trnL-UAA gene + 47081 47659 579 Locate
trnF-GAA gene + 47952 48025 74 Locate
ndhJ gene − 48685 49161 477 Locate
ndhK gene − 49262 49939 678 Locate
ndhC gene − 49993 50355 363 Locate
trnV-UAC gene − 51295 51942 648 Locate
trnM-CAU gene + 52131 52203 73 Locate
atpE gene − 52419 52820 402 Locate
atpB gene − 52817 54313 1497 Locate
rbcL gene + 55108 56553 1446 Locate
accD gene + 57234 58700 1467 Locate
psaI gene + 59388 59498 111 Locate
ycf4 gene + 59815 60369 555 Locate
cemA gene + 60748 61437 690 Locate
petA gene + 61654 62616 963 Locate
psbJ gene − 63652 63774 123 Locate
psbL gene − 63912 64028 117 Locate
psbF gene − 64052 64171 120 Locate
psbE gene − 64186 64437 252 Locate
petL gene + 65109 65204 96 Locate
petG gene + 65380 65493 114 Locate
trnW-CCA gene − 65619 65692 74 Locate
trnP-UGG gene − 65859 65934 76 Locate
psaJ gene + 66209 66343 135 Locate
rpl33 gene + 66798 66998 201 Locate
rps18 gene + 67157 67462 306 Locate
rpl20 gene − 67681 68067 387 Locate
rps12 gene − 68833 68946 114 Locate
clpP1 gene − 69093 70967 1875 Locate
psbB gene + 71407 72933 1527 Locate
psbT gene + 73130 73237 108 Locate
psbN gene − 73298 73429 132 Locate
psbH gene + 73533 73754 222 Locate
petB gene + 73879 75262 1384 Locate
petD gene + 75457 76676 1220 Locate
rpoA gene − 76839 77852 1014 Locate
rps11 gene − 77924 78340 417 Locate
rpl36 gene − 78443 78556 114 Locate
infA gene − 78652 78885 234 Locate
rps8 gene − 79009 79422 414 Locate
rpl14 gene − 79589 79957 369 Locate
rpl16 gene − 80084 81389 1306 Locate
rps3 gene − 81536 82198 663 Locate
rpl22 gene − 82183 82638 456 Locate
rps19 gene − 82702 82980 279 Locate
rpl2 gene − 83032 84523 1492 Locate
rpl23 gene − 84542 84823 282 Locate
trnM-CAU gene − 84988 85062 75 Locate
ycf2 gene + 85151 91966 6816 Locate
ycf15 gene + 92009 92257 249 Locate
trnL-CAA gene − 92517 92599 83 Locate
ndhB gene − 93143 95354 2212 Locate
rps7 gene − 95629 96096 468 Locate
rps12 gene − 96150 96943 794 Locate
trnV-GAC gene + 98582 98653 72 Locate
rrn16 gene + 98880 100370 1491 Locate
trnI gene + 100660 101668 1009 Locate
trnA-UGC gene + 101733 102611 879 Locate
rrn23 gene + 102803 105613 2811 Locate
rrn4.5 gene + 105712 105814 103 Locate
rrn5 gene + 106070 106190 121 Locate
trnR-ACG gene + 106425 106499 75 Locate
trnN-GUU gene − 107063 107136 74 Locate
ycf1 gene + 107461 108579 1119 Locate
ndhF gene − 108525 110753 2229 Locate
rpl32 gene + 111251 111427 177 Locate
trnL-UAG gene + 112162 112241 80 Locate
ccsA gene + 112328 113299 972 Locate
ndhD gene − 113481 114983 1503 Locate
psaC gene − 115097 115342 246 Locate
ndhE gene − 115592 115897 306 Locate
ndhG gene − 116097 116627 531 Locate
ndhI gene − 116994 117500 507 Locate
ndhA gene − 117580 119723 2144 Locate
ndhH gene − 119725 120906 1182 Locate
rps15 gene − 121007 121279 273 Locate
ycf1 gene − 121690 127278 5589 Locate
trnN-GUU gene + 127603 127676 74 Locate
trnR-ACG gene − 128240 128314 75 Locate
rrn5 gene − 128549 128669 121 Locate
rrn4.5 gene − 128925 129027 103 Locate
rrn23 gene − 129126 131936 2811 Locate
trnA-UGC gene − 132128 133006 879 Locate
trnI gene − 133071 134079 1009 Locate
rrn16 gene − 134369 135859 1491 Locate
trnV-GAC gene − 136086 136157 72 Locate
rps12 gene + 137796 138589 794 Locate
rps7 gene + 138643 139110 468 Locate
ndhB gene + 139385 141596 2212 Locate
trnL-CAA gene + 142140 142222 83 Locate
ycf15 gene − 142482 142730 249 Locate
ycf2 gene − 142773 149588 6816 Locate
trnM-CAU gene + 149677 149751 75 Locate
rpl23 gene + 149916 150197 282 Locate
rpl2 gene + 150216 151707 1492 Locate
rps19 gene + 151759 151800 42 Locate
Status Available
Accession PP190948.1
Length 151,800 bp
GC content 38.5%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources