Hanceola exserta chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_056915.1 · 11–85 bp · −
psbA · NC_056915.1 · 395–1,453 bp · −
trnK-UUU · NC_056915.1 · 1,685–4,300 bp · −
matK · NC_056915.1 · 2,039–3,559 bp · −
rps16 · NC_056915.1 · 4,841–5,982 bp · −
trnQ-UUG · NC_056915.1 · 6,957–7,028 bp · −
trnS-GCU · NC_056915.1 · 8,267–8,354 bp · −
atpA · NC_056915.1 · 10,251–11,774 bp · −
atpF · NC_056915.1 · 11,880–13,123 bp · −
atpH · NC_056915.1 · 13,413–13,658 bp · −
atpI · NC_056915.1 · 14,684–15,427 bp · −
rps2 · NC_056915.1 · 15,652–16,362 bp · −
rpoC2 · NC_056915.1 · 16,581–20,756 bp · −
rpoC1 · NC_056915.1 · 20,933–23,768 bp · −
rpoB · NC_056915.1 · 23,795–27,007 bp · −
psbM · NC_056915.1 · 29,588–29,692 bp · −
trnD-GUC · NC_056915.1 · 30,211–30,284 bp · −
trnY-GUA · NC_056915.1 · 30,395–30,478 bp · −
trnE-UUC · NC_056915.1 · 30,577–30,649 bp · −
trnS-UGA · NC_056915.1 · 35,372–35,464 bp · −
trnfM-CAU · NC_056915.1 · 36,482–36,555 bp · −
rps14 · NC_056915.1 · 36,700–37,002 bp · −
psaB · NC_056915.1 · 37,125–39,329 bp · −
psaA · NC_056915.1 · 39,355–41,607 bp · −
ycf3 · NC_056915.1 · 42,419–44,377 bp · −
rps4 · NC_056915.1 · 45,647–46,252 bp · −
trnT-UGU · NC_056915.1 · 46,644–46,716 bp · −
ndhJ · NC_056915.1 · 49,026–49,502 bp · −
ndhK · NC_056915.1 · 49,613–50,290 bp · −
ndhC · NC_056915.1 · 50,342–50,704 bp · −
trnV-UAC · NC_056915.1 · 51,661–52,310 bp · −
atpE · NC_056915.1 · 52,775–53,176 bp · −
atpB · NC_056915.1 · 53,173–54,669 bp · −
psbJ · NC_056915.1 · 64,511–64,633 bp · −
psbL · NC_056915.1 · 64,768–64,884 bp · −
psbF · NC_056915.1 · 64,908–65,027 bp · −
psbE · NC_056915.1 · 65,042–65,293 bp · −
trnW-CCA · NC_056915.1 · 66,694–66,767 bp · −
trnP-UGG · NC_056915.1 · 66,938–67,011 bp · −
rpl20 · NC_056915.1 · 68,825–69,211 bp · −
rps12 · NC_056915.1 · 69,941–70,054 bp · −
rps12 · NC_056915.1 · 97,396–98,189 bp · −
clpP · NC_056915.1 · 70,174–72,102 bp · −
psbN · NC_056915.1 · 74,450–74,581 bp · −
rpoA · NC_056915.1 · 77,968–78,975 bp · −
rps11 · NC_056915.1 · 79,047–79,463 bp · −
rpl36 · NC_056915.1 · 79,579–79,692 bp · −
infA · NC_056915.1 · 79,788–80,021 bp · −
rps8 · NC_056915.1 · 80,146–80,550 bp · −
rpl14 · NC_056915.1 · 80,723–81,091 bp · −
rpl16 · NC_056915.1 · 81,224–82,515 bp · −
rps3 · NC_056915.1 · 82,659–83,321 bp · −
rpl22 · NC_056915.1 · 83,306–83,779 bp · −
rps19 · NC_056915.1 · 83,844–84,122 bp · −
rpl2 · NC_056915.1 · 84,191–85,679 bp · −
rpl23 · NC_056915.1 · 85,698–85,979 bp · −
trnI-CAU · NC_056915.1 · 86,145–86,218 bp · −
trnL-CAA · NC_056915.1 · 93,746–93,826 bp · −
ndhB · NC_056915.1 · 94,397–96,604 bp · −
rps7 · NC_056915.1 · 96,875–97,342 bp · −
trnN-GUU · NC_056915.1 · 108,358–108,429 bp · −
ndhF · NC_056915.1 · 109,795–112,026 bp · −
ndhD · NC_056915.1 · 114,812–116,314 bp · −
psaC · NC_056915.1 · 116,432–116,677 bp · −
ndhE · NC_056915.1 · 116,932–117,237 bp · −
ndhG · NC_056915.1 · 117,443–117,973 bp · −
ndhI · NC_056915.1 · 118,345–118,851 bp · −
ndhA · NC_056915.1 · 118,932–121,049 bp · −
ndhH · NC_056915.1 · 121,051–122,232 bp · −
rps15 · NC_056915.1 · 122,347–122,619 bp · −
ycf1 · NC_056915.1 · 123,047–128,605 bp · −
trnR-ACG · NC_056915.1 · 129,591–129,664 bp · −
rrn5S · NC_056915.1 · 129,908–130,028 bp · −
rrn4.5S · NC_056915.1 · 130,289–130,391 bp · −
rrn23S · NC_056915.1 · 130,490–133,300 bp · −
trnA-UGC · NC_056915.1 · 133,472–134,350 bp · −
trnI-GAU · NC_056915.1 · 134,415–135,433 bp · −
rrn16S · NC_056915.1 · 135,731–137,221 bp · −
trnV-GAC · NC_056915.1 · 137,448–137,519 bp · −
ycf2 · NC_056915.1 · 144,230–151,069 bp · −
psbK · NC_056915.1 · 7,420–7,605 bp · +
psbI · NC_056915.1 · 8,001–8,111 bp · +
trnG-UCC · NC_056915.1 · 9,124–9,886 bp · +
trnR-UCU · NC_056915.1 · 10,075–10,146 bp · +
trnC-GCA · NC_056915.1 · 28,218–28,288 bp · +
petN · NC_056915.1 · 28,451–28,540 bp · +
trnT-GGU · NC_056915.1 · 31,259–31,330 bp · +
psbD · NC_056915.1 · 32,709–33,770 bp · +
psbC · NC_056915.1 · 33,718–35,139 bp · +
psbZ · NC_056915.1 · 35,797–35,985 bp · +
trnG-GCC · NC_056915.1 · 36,230–36,300 bp · +
trnS-GGA · NC_056915.1 · 45,271–45,357 bp · +
trnL-UAA · NC_056915.1 · 47,409–47,979 bp · +
trnF-GAA · NC_056915.1 · 48,277–48,349 bp · +
trnM-CAU · NC_056915.1 · 52,491–52,563 bp · +
rbcL · NC_056915.1 · 55,467–56,900 bp · +
accD · NC_056915.1 · 57,543–59,093 bp · +
psaI · NC_056915.1 · 59,860–59,970 bp · +
ycf4 · NC_056915.1 · 60,416–60,970 bp · +
cemA · NC_056915.1 · 61,618–62,307 bp · +
petA · NC_056915.1 · 62,522–63,484 bp · +
petL · NC_056915.1 · 66,188–66,283 bp · +
petG · NC_056915.1 · 66,458–66,571 bp · +
psaJ · NC_056915.1 · 67,327–67,461 bp · +
rpl33 · NC_056915.1 · 67,919–68,119 bp · +
rps18 · NC_056915.1 · 68,286–68,591 bp · +
rps12 · NC_056915.1 · 139,187–139,980 bp · +
psbB · NC_056915.1 · 72,575–74,101 bp · +
psbT · NC_056915.1 · 74,283–74,384 bp · +
psbH · NC_056915.1 · 74,687–74,905 bp · +
petB · NC_056915.1 · 75,040–76,407 bp · +
petD · NC_056915.1 · 76,596–77,791 bp · +
ycf2 · NC_056915.1 · 86,307–93,146 bp · +
trnV-GAC · NC_056915.1 · 99,857–99,928 bp · +
rrn16S · NC_056915.1 · 100,155–101,645 bp · +
trnI-GAU · NC_056915.1 · 101,943–102,961 bp · +
trnA-UGC · NC_056915.1 · 103,026–103,904 bp · +
rrn23S · NC_056915.1 · 104,076–106,886 bp · +
rrn4.5S · NC_056915.1 · 106,985–107,087 bp · +
rrn5S · NC_056915.1 · 107,348–107,468 bp · +
trnR-ACG · NC_056915.1 · 107,712–107,785 bp · +
rpl32 · NC_056915.1 · 112,513–112,692 bp · +
trnL-UAG · NC_056915.1 · 113,439–113,518 bp · +
ccsA · NC_056915.1 · 113,608–114,579 bp · +
trnN-GUU · NC_056915.1 · 128,947–129,018 bp · +
rps7 · NC_056915.1 · 140,034–140,501 bp · +
ndhB · NC_056915.1 · 140,772–142,979 bp · +
trnL-CAA · NC_056915.1 · 143,550–143,630 bp · +
trnI-CAU · NC_056915.1 · 151,158–151,231 bp · +
rpl23 · NC_056915.1 · 151,397–151,678 bp · +
rpl2 · NC_056915.1 · 151,697–153,185 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Hanceola exserta
ANNOTATED PLASTOME
NC_056915.1
153,296 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38324 76648 114972 153296 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 395 1453 1059 Locate
trnK-UUU gene − 1685 4300 2616 Locate
matK gene − 2039 3559 1521 Locate
rps16 gene − 4841 5982 1142 Locate
trnQ-UUG gene − 6957 7028 72 Locate
psbK gene + 7420 7605 186 Locate
psbI gene + 8001 8111 111 Locate
trnS-GCU gene − 8267 8354 88 Locate
trnG-UCC gene + 9124 9886 763 Locate
trnR-UCU gene + 10075 10146 72 Locate
atpA gene − 10251 11774 1524 Locate
atpF gene − 11880 13123 1244 Locate
atpH gene − 13413 13658 246 Locate
atpI gene − 14684 15427 744 Locate
rps2 gene − 15652 16362 711 Locate
rpoC2 gene − 16581 20756 4176 Locate
rpoC1 gene − 20933 23768 2836 Locate
rpoB gene − 23795 27007 3213 Locate
trnC-GCA gene + 28218 28288 71 Locate
petN gene + 28451 28540 90 Locate
psbM gene − 29588 29692 105 Locate
trnD-GUC gene − 30211 30284 74 Locate
trnY-GUA gene − 30395 30478 84 Locate
trnE-UUC gene − 30577 30649 73 Locate
trnT-GGU gene + 31259 31330 72 Locate
psbD gene + 32709 33770 1062 Locate
psbC gene + 33718 35139 1422 Locate
trnS-UGA gene − 35372 35464 93 Locate
psbZ gene + 35797 35985 189 Locate
trnG-GCC gene + 36230 36300 71 Locate
trnfM-CAU gene − 36482 36555 74 Locate
rps14 gene − 36700 37002 303 Locate
psaB gene − 37125 39329 2205 Locate
psaA gene − 39355 41607 2253 Locate
ycf3 gene − 42419 44377 1959 Locate
trnS-GGA gene + 45271 45357 87 Locate
rps4 gene − 45647 46252 606 Locate
trnT-UGU gene − 46644 46716 73 Locate
trnL-UAA gene + 47409 47979 571 Locate
trnF-GAA gene + 48277 48349 73 Locate
ndhJ gene − 49026 49502 477 Locate
ndhK gene − 49613 50290 678 Locate
ndhC gene − 50342 50704 363 Locate
trnV-UAC gene − 51661 52310 650 Locate
trnM-CAU gene + 52491 52563 73 Locate
atpE gene − 52775 53176 402 Locate
atpB gene − 53173 54669 1497 Locate
rbcL gene + 55467 56900 1434 Locate
accD gene + 57543 59093 1551 Locate
psaI gene + 59860 59970 111 Locate
ycf4 gene + 60416 60970 555 Locate
cemA gene + 61618 62307 690 Locate
petA gene + 62522 63484 963 Locate
psbJ gene − 64511 64633 123 Locate
psbL gene − 64768 64884 117 Locate
psbF gene − 64908 65027 120 Locate
psbE gene − 65042 65293 252 Locate
petL gene + 66188 66283 96 Locate
petG gene + 66458 66571 114 Locate
trnW-CCA gene − 66694 66767 74 Locate
trnP-UGG gene − 66938 67011 74 Locate
psaJ gene + 67327 67461 135 Locate
rpl33 gene + 67919 68119 201 Locate
rps18 gene + 68286 68591 306 Locate
rpl20 gene − 68825 69211 387 Locate
rps12 gene − 69941 70054 114 Locate
clpP gene − 70174 72102 1929 Locate
psbB gene + 72575 74101 1527 Locate
psbT gene + 74283 74384 102 Locate
psbN gene − 74450 74581 132 Locate
psbH gene + 74687 74905 219 Locate
petB gene + 75040 76407 1368 Locate
petD gene + 76596 77791 1196 Locate
rpoA gene − 77968 78975 1008 Locate
rps11 gene − 79047 79463 417 Locate
rpl36 gene − 79579 79692 114 Locate
infA gene − 79788 80021 234 Locate
rps8 gene − 80146 80550 405 Locate
rpl14 gene − 80723 81091 369 Locate
rpl16 gene − 81224 82515 1292 Locate
rps3 gene − 82659 83321 663 Locate
rpl22 gene − 83306 83779 474 Locate
rps19 gene − 83844 84122 279 Locate
rpl2 gene − 84191 85679 1489 Locate
rpl23 gene − 85698 85979 282 Locate
trnI-CAU gene − 86145 86218 74 Locate
ycf2 gene + 86307 93146 6840 Locate
trnL-CAA gene − 93746 93826 81 Locate
ndhB gene − 94397 96604 2208 Locate
rps7 gene − 96875 97342 468 Locate
rps12 gene − 97396 98189 794 Locate
trnV-GAC gene + 99857 99928 72 Locate
rrn16S gene + 100155 101645 1491 Locate
trnI-GAU gene + 101943 102961 1019 Locate
trnA-UGC gene + 103026 103904 879 Locate
rrn23S gene + 104076 106886 2811 Locate
rrn4.5S gene + 106985 107087 103 Locate
rrn5S gene + 107348 107468 121 Locate
trnR-ACG gene + 107712 107785 74 Locate
trnN-GUU gene − 108358 108429 72 Locate
ndhF gene − 109795 112026 2232 Locate
rpl32 gene + 112513 112692 180 Locate
trnL-UAG gene + 113439 113518 80 Locate
ccsA gene + 113608 114579 972 Locate
ndhD gene − 114812 116314 1503 Locate
psaC gene − 116432 116677 246 Locate
ndhE gene − 116932 117237 306 Locate
ndhG gene − 117443 117973 531 Locate
ndhI gene − 118345 118851 507 Locate
ndhA gene − 118932 121049 2118 Locate
ndhH gene − 121051 122232 1182 Locate
rps15 gene − 122347 122619 273 Locate
ycf1 gene − 123047 128605 5559 Locate
trnN-GUU gene + 128947 129018 72 Locate
trnR-ACG gene − 129591 129664 74 Locate
rrn5S gene − 129908 130028 121 Locate
rrn4.5S gene − 130289 130391 103 Locate
rrn23S gene − 130490 133300 2811 Locate
trnA-UGC gene − 133472 134350 879 Locate
trnI-GAU gene − 134415 135433 1019 Locate
rrn16S gene − 135731 137221 1491 Locate
trnV-GAC gene − 137448 137519 72 Locate
rps12 gene + 139187 139980 794 Locate
rps7 gene + 140034 140501 468 Locate
ndhB gene + 140772 142979 2208 Locate
trnL-CAA gene + 143550 143630 81 Locate
ycf2 gene − 144230 151069 6840 Locate
trnI-CAU gene + 151158 151231 74 Locate
rpl23 gene + 151397 151678 282 Locate
rpl2 gene + 151697 153185 1489 Locate
Status Available
Accession NC_056915.1
Length 153,296 bp
GC content 37.8%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources