Isodon eriocalyx chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_067779.1 · 11–84 bp · −
psbA · NC_067779.1 · 393–1,451 bp · −
trnK-UUU · NC_067779.1 · 1,682–4,263 bp · −
matK · NC_067779.1 · 2,003–3,523 bp · −
rps16 · NC_067779.1 · 4,796–5,941 bp · −
trnQ-UUG · NC_067779.1 · 6,888–6,959 bp · −
trnS-GCU · NC_067779.1 · 8,192–8,279 bp · −
atpA · NC_067779.1 · 10,166–11,689 bp · −
atpF · NC_067779.1 · 11,794–13,041 bp · −
atpH · NC_067779.1 · 13,333–13,578 bp · −
atpI · NC_067779.1 · 14,580–15,323 bp · −
rps2 · NC_067779.1 · 15,549–16,259 bp · −
rpoC2 · NC_067779.1 · 16,474–20,643 bp · −
rpoC1 · NC_067779.1 · 20,820–23,653 bp · −
rpoB · NC_067779.1 · 23,680–26,892 bp · −
psbM · NC_067779.1 · 29,390–29,494 bp · −
trnD-GUC · NC_067779.1 · 30,013–30,086 bp · −
trnY-GUA · NC_067779.1 · 30,197–30,280 bp · −
trnE-UUC · NC_067779.1 · 30,358–30,430 bp · −
trnS-UGA · NC_067779.1 · 35,097–35,189 bp · −
trnM-CAU · NC_067779.1 · 36,223–36,296 bp · −
rps14 · NC_067779.1 · 36,442–36,744 bp · −
psaB · NC_067779.1 · 36,867–39,071 bp · −
psaA · NC_067779.1 · 39,097–41,349 bp · −
ycf3 · NC_067779.1 · 42,122–44,069 bp · −
rps4 · NC_067779.1 · 45,316–45,921 bp · −
trnT-UGU · NC_067779.1 · 46,346–46,418 bp · −
ndhJ · NC_067779.1 · 48,683–49,159 bp · −
ndhK · NC_067779.1 · 49,270–49,947 bp · −
ndhC · NC_067779.1 · 49,999–50,361 bp · −
atpE · NC_067779.1 · 52,427–52,828 bp · −
atpB · NC_067779.1 · 52,825–54,321 bp · −
psbJ · NC_067779.1 · 64,037–64,159 bp · −
psbL · NC_067779.1 · 64,294–64,410 bp · −
psbF · NC_067779.1 · 64,434–64,553 bp · −
psbE · NC_067779.1 · 64,568–64,819 bp · −
trnW-CCA · NC_067779.1 · 66,218–66,291 bp · −
trnP-UGG · NC_067779.1 · 66,460–66,533 bp · −
rpl20 · NC_067779.1 · 68,317–68,703 bp · −
rps12 · NC_067779.1 · 69,437–69,550 bp · −
rps12 · NC_067779.1 · 96,850–97,642 bp · −
clpP · NC_067779.1 · 69,669–71,586 bp · −
psbN · NC_067779.1 · 73,937–74,068 bp · −
rpoA · NC_067779.1 · 77,438–78,445 bp · −
rps11 · NC_067779.1 · 78,517–78,933 bp · −
rpl36 · NC_067779.1 · 79,049–79,162 bp · −
infA · NC_067779.1 · 79,258–79,491 bp · −
rps8 · NC_067779.1 · 79,618–80,022 bp · −
rpl14 · NC_067779.1 · 80,213–80,581 bp · −
rpl16 · NC_067779.1 · 80,715–81,982 bp · −
rps3 · NC_067779.1 · 82,126–82,788 bp · −
rpl22 · NC_067779.1 · 82,773–83,246 bp · −
rps19 · NC_067779.1 · 83,311–83,589 bp · −
rpl2 · NC_067779.1 · 83,657–85,135 bp · −
rpl23 · NC_067779.1 · 85,154–85,435 bp · −
trnI-CAU · NC_067779.1 · 85,601–85,674 bp · −
trnL-CAA · NC_067779.1 · 93,199–93,279 bp · −
ndhB · NC_067779.1 · 93,851–96,058 bp · −
rps7 · NC_067779.1 · 96,329–96,796 bp · −
rrn4.5 · NC_067779.1 · 106,433–106,697 bp · −
trnN-GUU · NC_067779.1 · 107,795–107,866 bp · −
ndhF · NC_067779.1 · 109,232–111,463 bp · −
ndhD · NC_067779.1 · 114,231–115,760 bp · −
psaC · NC_067779.1 · 115,851–116,096 bp · −
ndhE · NC_067779.1 · 116,352–116,657 bp · −
ndhG · NC_067779.1 · 116,872–117,402 bp · −
ndhI · NC_067779.1 · 117,763–118,269 bp · −
ndhA · NC_067779.1 · 118,350–120,474 bp · −
ndhH · NC_067779.1 · 120,476–121,657 bp · −
rps15 · NC_067779.1 · 121,772–122,044 bp · −
ycf1 · NC_067779.1 · 122,474–127,996 bp · −
trnR-ACG · NC_067779.1 · 128,976–129,049 bp · −
rrn5 · NC_067779.1 · 129,283–129,413 bp · −
rrn23 · NC_067779.1 · 129,870–132,680 bp · −
trnA-UGC · NC_067779.1 · 132,852–133,730 bp · −
trnI-GAU · NC_067779.1 · 133,795–134,813 bp · −
rrn16 · NC_067779.1 · 135,111–136,601 bp · −
trnV-GAC · NC_067779.1 · 136,828–136,899 bp · −
ycf15 · NC_067779.1 · 143,266–143,415 bp · −
ycf2 · NC_067779.1 · 143,605–150,435 bp · −
psbK · NC_067779.1 · 7,353–7,538 bp · +
psbI · NC_067779.1 · 7,926–8,036 bp · +
trnT-CGU · NC_067779.1 · 9,040–9,800 bp · +
trnR-UCU · NC_067779.1 · 9,991–10,062 bp · +
trnC-GCA · NC_067779.1 · 28,082–28,152 bp · +
petN · NC_067779.1 · 28,310–28,399 bp · +
trnT-GGU · NC_067779.1 · 31,040–31,111 bp · +
psbD · NC_067779.1 · 32,429–33,490 bp · +
psbC · NC_067779.1 · 33,438–34,859 bp · +
psbZ · NC_067779.1 · 35,530–35,718 bp · +
trnG-GCC · NC_067779.1 · 35,963–36,033 bp · +
trnS-GGA · NC_067779.1 · 44,933–45,019 bp · +
trnL-UAA · NC_067779.1 · 47,106–47,649 bp · +
trnF-GAA · NC_067779.1 · 47,943–48,015 bp · +
trnM-CAU · NC_067779.1 · 52,154–52,226 bp · +
rbcL · NC_067779.1 · 55,092–56,546 bp · +
accD · NC_067779.1 · 57,182–58,732 bp · +
psaI · NC_067779.1 · 59,433–59,543 bp · +
ycf4 · NC_067779.1 · 59,989–60,543 bp · +
cemA · NC_067779.1 · 61,133–61,822 bp · +
petA · NC_067779.1 · 62,037–62,999 bp · +
petL · NC_067779.1 · 65,712–65,807 bp · +
petG · NC_067779.1 · 65,982–66,095 bp · +
psaJ · NC_067779.1 · 66,815–66,949 bp · +
rpl33 · NC_067779.1 · 67,411–67,611 bp · +
rps18 · NC_067779.1 · 67,778–68,083 bp · +
rps12 · NC_067779.1 · 138,562–139,354 bp · +
psbB · NC_067779.1 · 72,059–73,585 bp · +
psbT · NC_067779.1 · 73,770–73,871 bp · +
psbH · NC_067779.1 · 74,174–74,392 bp · +
petB · NC_067779.1 · 74,514–75,880 bp · +
petD · NC_067779.1 · 76,069–77,261 bp · +
ycf2 · NC_067779.1 · 85,769–92,599 bp · +
ycf15 · NC_067779.1 · 92,789–92,938 bp · +
trnV-GAC · NC_067779.1 · 99,305–99,376 bp · +
rrn16 · NC_067779.1 · 99,603–101,093 bp · +
trnI-GAU · NC_067779.1 · 101,391–102,409 bp · +
trnA-UGC · NC_067779.1 · 102,474–103,352 bp · +
rrn23 · NC_067779.1 · 103,524–106,334 bp · +
rrn5 · NC_067779.1 · 106,791–106,921 bp · +
trnR-ACG · NC_067779.1 · 107,155–107,228 bp · +
ycf1 · NC_067779.1 · 108,208–109,338 bp · +
rpl32 · NC_067779.1 · 111,932–112,102 bp · +
trnL-UAG · NC_067779.1 · 112,860–112,939 bp · +
ccsA · NC_067779.1 · 113,028–113,999 bp · +
trnN-GUU · NC_067779.1 · 128,338–128,409 bp · +
rrn4.5 · NC_067779.1 · 129,507–129,771 bp · +
rps7 · NC_067779.1 · 139,408–139,875 bp · +
ndhB · NC_067779.1 · 140,146–142,353 bp · +
trnL-CAA · NC_067779.1 · 142,925–143,005 bp · +
trnI-CAU · NC_067779.1 · 150,530–150,603 bp · +
rpl23 · NC_067779.1 · 150,769–151,050 bp · +
rpl2 · NC_067779.1 · 151,069–152,547 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon eriocalyx
ANNOTATED PLASTOME
NC_067779.1
152,657 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38164 76328 114493 152657 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rrn4.5 rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rrn4.5 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1682 4263 2582 Locate
matK gene − 2003 3523 1521 Locate
rps16 gene − 4796 5941 1146 Locate
trnQ-UUG gene − 6888 6959 72 Locate
psbK gene + 7353 7538 186 Locate
psbI gene + 7926 8036 111 Locate
trnS-GCU gene − 8192 8279 88 Locate
trnT-CGU gene + 9040 9800 761 Locate
trnR-UCU gene + 9991 10062 72 Locate
atpA gene − 10166 11689 1524 Locate
atpF gene − 11794 13041 1248 Locate
atpH gene − 13333 13578 246 Locate
atpI gene − 14580 15323 744 Locate
rps2 gene − 15549 16259 711 Locate
rpoC2 gene − 16474 20643 4170 Locate
rpoC1 gene − 20820 23653 2834 Locate
rpoB gene − 23680 26892 3213 Locate
trnC-GCA gene + 28082 28152 71 Locate
petN gene + 28310 28399 90 Locate
psbM gene − 29390 29494 105 Locate
trnD-GUC gene − 30013 30086 74 Locate
trnY-GUA gene − 30197 30280 84 Locate
trnE-UUC gene − 30358 30430 73 Locate
trnT-GGU gene + 31040 31111 72 Locate
psbD gene + 32429 33490 1062 Locate
psbC gene + 33438 34859 1422 Locate
trnS-UGA gene − 35097 35189 93 Locate
psbZ gene + 35530 35718 189 Locate
trnG-GCC gene + 35963 36033 71 Locate
trnM-CAU gene − 36223 36296 74 Locate
rps14 gene − 36442 36744 303 Locate
psaB gene − 36867 39071 2205 Locate
psaA gene − 39097 41349 2253 Locate
ycf3 gene − 42122 44069 1948 Locate
trnS-GGA gene + 44933 45019 87 Locate
rps4 gene − 45316 45921 606 Locate
trnT-UGU gene − 46346 46418 73 Locate
trnL-UAA gene + 47106 47649 544 Locate
trnF-GAA gene + 47943 48015 73 Locate
ndhJ gene − 48683 49159 477 Locate
ndhK gene − 49270 49947 678 Locate
ndhC gene − 49999 50361 363 Locate
trnM-CAU gene + 52154 52226 73 Locate
atpE gene − 52427 52828 402 Locate
atpB gene − 52825 54321 1497 Locate
rbcL gene + 55092 56546 1455 Locate
accD gene + 57182 58732 1551 Locate
psaI gene + 59433 59543 111 Locate
ycf4 gene + 59989 60543 555 Locate
cemA gene + 61133 61822 690 Locate
petA gene + 62037 62999 963 Locate
psbJ gene − 64037 64159 123 Locate
psbL gene − 64294 64410 117 Locate
psbF gene − 64434 64553 120 Locate
psbE gene − 64568 64819 252 Locate
petL gene + 65712 65807 96 Locate
petG gene + 65982 66095 114 Locate
trnW-CCA gene − 66218 66291 74 Locate
trnP-UGG gene − 66460 66533 74 Locate
psaJ gene + 66815 66949 135 Locate
rpl33 gene + 67411 67611 201 Locate
rps18 gene + 67778 68083 306 Locate
rpl20 gene − 68317 68703 387 Locate
rps12 gene − 69437 69550 114 Locate
clpP gene − 69669 71586 1918 Locate
psbB gene + 72059 73585 1527 Locate
psbT gene + 73770 73871 102 Locate
psbN gene − 73937 74068 132 Locate
psbH gene + 74174 74392 219 Locate
petB gene + 74514 75880 1367 Locate
petD gene + 76069 77261 1193 Locate
rpoA gene − 77438 78445 1008 Locate
rps11 gene − 78517 78933 417 Locate
rpl36 gene − 79049 79162 114 Locate
infA gene − 79258 79491 234 Locate
rps8 gene − 79618 80022 405 Locate
rpl14 gene − 80213 80581 369 Locate
rpl16 gene − 80715 81982 1268 Locate
rps3 gene − 82126 82788 663 Locate
rpl22 gene − 82773 83246 474 Locate
rps19 gene − 83311 83589 279 Locate
rpl2 gene − 83657 85135 1479 Locate
rpl23 gene − 85154 85435 282 Locate
trnI-CAU gene − 85601 85674 74 Locate
ycf2 gene + 85769 92599 6831 Locate
ycf15 gene + 92789 92938 150 Locate
trnL-CAA gene − 93199 93279 81 Locate
ndhB gene − 93851 96058 2208 Locate
rps7 gene − 96329 96796 468 Locate
rps12 gene − 96850 97642 793 Locate
trnV-GAC gene + 99305 99376 72 Locate
rrn16 gene + 99603 101093 1491 Locate
trnI-GAU gene + 101391 102409 1019 Locate
trnA-UGC gene + 102474 103352 879 Locate
rrn23 gene + 103524 106334 2811 Locate
rrn4.5 gene − 106433 106697 265 Locate
rrn5 gene + 106791 106921 131 Locate
trnR-ACG gene + 107155 107228 74 Locate
trnN-GUU gene − 107795 107866 72 Locate
ycf1 gene + 108208 109338 1131 Locate
ndhF gene − 109232 111463 2232 Locate
rpl32 gene + 111932 112102 171 Locate
trnL-UAG gene + 112860 112939 80 Locate
ccsA gene + 113028 113999 972 Locate
ndhD gene − 114231 115760 1530 Locate
psaC gene − 115851 116096 246 Locate
ndhE gene − 116352 116657 306 Locate
ndhG gene − 116872 117402 531 Locate
ndhI gene − 117763 118269 507 Locate
ndhA gene − 118350 120474 2125 Locate
ndhH gene − 120476 121657 1182 Locate
rps15 gene − 121772 122044 273 Locate
ycf1 gene − 122474 127996 5523 Locate
trnN-GUU gene + 128338 128409 72 Locate
trnR-ACG gene − 128976 129049 74 Locate
rrn5 gene − 129283 129413 131 Locate
rrn4.5 gene + 129507 129771 265 Locate
rrn23 gene − 129870 132680 2811 Locate
trnA-UGC gene − 132852 133730 879 Locate
trnI-GAU gene − 133795 134813 1019 Locate
rrn16 gene − 135111 136601 1491 Locate
trnV-GAC gene − 136828 136899 72 Locate
rps12 gene + 138562 139354 793 Locate
rps7 gene + 139408 139875 468 Locate
ndhB gene + 140146 142353 2208 Locate
trnL-CAA gene + 142925 143005 81 Locate
ycf15 gene − 143266 143415 150 Locate
ycf2 gene − 143605 150435 6831 Locate
trnI-CAU gene + 150530 150603 74 Locate
rpl23 gene + 150769 151050 282 Locate
rpl2 gene + 151069 152547 1479 Locate
Status Available
Accession NC_067779.1
Length 152,657 bp
GC content 37.6%
Annotated genes 132
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources