Isodon inflexus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_067781.1 · 11–84 bp · −
psbA · NC_067781.1 · 393–1,451 bp · −
trnK-UUU · NC_067781.1 · 1,682–4,263 bp · −
matK · NC_067781.1 · 2,003–3,523 bp · −
rps16 · NC_067781.1 · 4,790–5,935 bp · −
trnQ-UUG · NC_067781.1 · 6,881–6,952 bp · −
trnS-GCU · NC_067781.1 · 8,185–8,272 bp · −
atpA · NC_067781.1 · 10,177–11,700 bp · −
atpF · NC_067781.1 · 11,810–13,055 bp · −
atpH · NC_067781.1 · 13,347–13,592 bp · −
atpI · NC_067781.1 · 14,590–15,333 bp · −
rps2 · NC_067781.1 · 15,559–16,269 bp · −
rpoC2 · NC_067781.1 · 16,485–20,654 bp · −
rpoC1 · NC_067781.1 · 20,831–23,664 bp · −
rpoB · NC_067781.1 · 23,691–26,903 bp · −
psbM · NC_067781.1 · 29,424–29,528 bp · −
trnD-GUC · NC_067781.1 · 30,047–30,120 bp · −
trnY-GUA · NC_067781.1 · 30,231–30,314 bp · −
trnE-UUC · NC_067781.1 · 30,392–30,464 bp · −
trnS-UGA · NC_067781.1 · 35,130–35,222 bp · −
trnM-CAU · NC_067781.1 · 36,255–36,328 bp · −
rps14 · NC_067781.1 · 36,474–36,776 bp · −
psaB · NC_067781.1 · 36,899–39,103 bp · −
psaA · NC_067781.1 · 39,129–41,381 bp · −
ycf3 · NC_067781.1 · 42,149–44,089 bp · −
rps4 · NC_067781.1 · 45,336–45,941 bp · −
trnT-UGU · NC_067781.1 · 46,365–46,437 bp · −
ndhJ · NC_067781.1 · 48,708–49,184 bp · −
ndhK · NC_067781.1 · 49,295–49,972 bp · −
ndhC · NC_067781.1 · 50,024–50,386 bp · −
atpE · NC_067781.1 · 52,452–52,853 bp · −
atpB · NC_067781.1 · 52,850–54,346 bp · −
psbJ · NC_067781.1 · 64,064–64,186 bp · −
psbL · NC_067781.1 · 64,321–64,437 bp · −
psbF · NC_067781.1 · 64,461–64,580 bp · −
psbE · NC_067781.1 · 64,595–64,846 bp · −
trnW-CCA · NC_067781.1 · 66,245–66,318 bp · −
trnP-UGG · NC_067781.1 · 66,487–66,560 bp · −
rpl20 · NC_067781.1 · 68,347–68,733 bp · −
rps12 · NC_067781.1 · 69,468–69,581 bp · −
rps12 · NC_067781.1 · 96,876–97,668 bp · −
clpP · NC_067781.1 · 69,700–71,615 bp · −
psbN · NC_067781.1 · 73,966–74,097 bp · −
rpoA · NC_067781.1 · 77,471–78,478 bp · −
rps11 · NC_067781.1 · 78,550–78,966 bp · −
rpl36 · NC_067781.1 · 79,082–79,195 bp · −
infA · NC_067781.1 · 79,291–79,524 bp · −
rps8 · NC_067781.1 · 79,652–80,056 bp · −
rpl14 · NC_067781.1 · 80,239–80,607 bp · −
rpl16 · NC_067781.1 · 80,741–82,008 bp · −
rps3 · NC_067781.1 · 82,152–82,814 bp · −
rpl22 · NC_067781.1 · 82,799–83,272 bp · −
rps19 · NC_067781.1 · 83,337–83,615 bp · −
rpl2 · NC_067781.1 · 83,683–85,161 bp · −
rpl23 · NC_067781.1 · 85,180–85,461 bp · −
trnI-CAU · NC_067781.1 · 85,627–85,700 bp · −
trnL-CAA · NC_067781.1 · 93,225–93,305 bp · −
ndhB · NC_067781.1 · 93,877–96,084 bp · −
rps7 · NC_067781.1 · 96,355–96,822 bp · −
rrn4.5 · NC_067781.1 · 106,458–106,722 bp · −
trnN-GUU · NC_067781.1 · 107,820–107,891 bp · −
ndhF · NC_067781.1 · 109,257–111,494 bp · −
ndhD · NC_067781.1 · 114,268–115,797 bp · −
psaC · NC_067781.1 · 115,888–116,133 bp · −
ndhE · NC_067781.1 · 116,389–116,694 bp · −
ndhG · NC_067781.1 · 116,909–117,439 bp · −
ndhI · NC_067781.1 · 117,799–118,305 bp · −
ndhA · NC_067781.1 · 118,386–120,509 bp · −
ndhH · NC_067781.1 · 120,511–121,692 bp · −
rps15 · NC_067781.1 · 121,807–122,079 bp · −
ycf1 · NC_067781.1 · 122,519–128,041 bp · −
trnR-ACG · NC_067781.1 · 129,021–129,094 bp · −
rrn5 · NC_067781.1 · 129,328–129,458 bp · −
rrn23 · NC_067781.1 · 129,915–132,725 bp · −
trnA-UGC · NC_067781.1 · 132,897–133,775 bp · −
trnI-GAU · NC_067781.1 · 133,840–134,858 bp · −
rrn16 · NC_067781.1 · 135,156–136,646 bp · −
trnV-GAC · NC_067781.1 · 136,873–136,944 bp · −
ycf15 · NC_067781.1 · 143,310–143,459 bp · −
ycf2 · NC_067781.1 · 143,649–150,479 bp · −
psbK · NC_067781.1 · 7,346–7,531 bp · +
psbI · NC_067781.1 · 7,919–8,029 bp · +
trnT-CGU · NC_067781.1 · 9,041–9,805 bp · +
trnR-UCU · NC_067781.1 · 10,002–10,073 bp · +
trnC-GCA · NC_067781.1 · 28,110–28,180 bp · +
petN · NC_067781.1 · 28,343–28,432 bp · +
trnT-GGU · NC_067781.1 · 31,074–31,145 bp · +
psbD · NC_067781.1 · 32,463–33,524 bp · +
psbC · NC_067781.1 · 33,472–34,893 bp · +
psbZ · NC_067781.1 · 35,563–35,751 bp · +
trnG-GCC · NC_067781.1 · 35,996–36,066 bp · +
trnS-GGA · NC_067781.1 · 44,953–45,039 bp · +
trnL-UAA · NC_067781.1 · 47,125–47,668 bp · +
trnF-GAA · NC_067781.1 · 47,962–48,034 bp · +
trnM-CAU · NC_067781.1 · 52,179–52,251 bp · +
rbcL · NC_067781.1 · 55,117–56,571 bp · +
accD · NC_067781.1 · 57,207–58,757 bp · +
psaI · NC_067781.1 · 59,457–59,567 bp · +
ycf4 · NC_067781.1 · 60,014–60,568 bp · +
cemA · NC_067781.1 · 61,159–61,848 bp · +
petA · NC_067781.1 · 62,063–63,025 bp · +
petL · NC_067781.1 · 65,739–65,834 bp · +
petG · NC_067781.1 · 66,009–66,122 bp · +
psaJ · NC_067781.1 · 66,842–66,976 bp · +
rpl33 · NC_067781.1 · 67,439–67,639 bp · +
rps18 · NC_067781.1 · 67,806–68,111 bp · +
rps12 · NC_067781.1 · 138,606–139,398 bp · +
psbB · NC_067781.1 · 72,088–73,614 bp · +
psbT · NC_067781.1 · 73,799–73,900 bp · +
psbH · NC_067781.1 · 74,203–74,421 bp · +
petB · NC_067781.1 · 74,547–75,913 bp · +
petD · NC_067781.1 · 76,102–77,294 bp · +
ycf2 · NC_067781.1 · 85,795–92,625 bp · +
ycf15 · NC_067781.1 · 92,815–92,964 bp · +
trnV-GAC · NC_067781.1 · 99,330–99,401 bp · +
rrn16 · NC_067781.1 · 99,628–101,118 bp · +
trnI-GAU · NC_067781.1 · 101,416–102,434 bp · +
trnA-UGC · NC_067781.1 · 102,499–103,377 bp · +
rrn23 · NC_067781.1 · 103,549–106,359 bp · +
rrn5 · NC_067781.1 · 106,816–106,946 bp · +
trnR-ACG · NC_067781.1 · 107,180–107,253 bp · +
ycf1 · NC_067781.1 · 108,233–109,363 bp · +
rpl32 · NC_067781.1 · 111,963–112,133 bp · +
trnL-UAG · NC_067781.1 · 112,897–112,976 bp · +
ccsA · NC_067781.1 · 113,065–114,036 bp · +
trnN-GUU · NC_067781.1 · 128,383–128,454 bp · +
rrn4.5 · NC_067781.1 · 129,552–129,816 bp · +
rps7 · NC_067781.1 · 139,452–139,919 bp · +
ndhB · NC_067781.1 · 140,190–142,397 bp · +
trnL-CAA · NC_067781.1 · 142,969–143,049 bp · +
trnI-CAU · NC_067781.1 · 150,574–150,647 bp · +
rpl23 · NC_067781.1 · 150,813–151,094 bp · +
rpl2 · NC_067781.1 · 151,113–152,591 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon inflexus
ANNOTATED PLASTOME
NC_067781.1
152,701 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38175 76350 114526 152701 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rrn4.5 rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rrn4.5 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1682 4263 2582 Locate
matK gene − 2003 3523 1521 Locate
rps16 gene − 4790 5935 1146 Locate
trnQ-UUG gene − 6881 6952 72 Locate
psbK gene + 7346 7531 186 Locate
psbI gene + 7919 8029 111 Locate
trnS-GCU gene − 8185 8272 88 Locate
trnT-CGU gene + 9041 9805 765 Locate
trnR-UCU gene + 10002 10073 72 Locate
atpA gene − 10177 11700 1524 Locate
atpF gene − 11810 13055 1246 Locate
atpH gene − 13347 13592 246 Locate
atpI gene − 14590 15333 744 Locate
rps2 gene − 15559 16269 711 Locate
rpoC2 gene − 16485 20654 4170 Locate
rpoC1 gene − 20831 23664 2834 Locate
rpoB gene − 23691 26903 3213 Locate
trnC-GCA gene + 28110 28180 71 Locate
petN gene + 28343 28432 90 Locate
psbM gene − 29424 29528 105 Locate
trnD-GUC gene − 30047 30120 74 Locate
trnY-GUA gene − 30231 30314 84 Locate
trnE-UUC gene − 30392 30464 73 Locate
trnT-GGU gene + 31074 31145 72 Locate
psbD gene + 32463 33524 1062 Locate
psbC gene + 33472 34893 1422 Locate
trnS-UGA gene − 35130 35222 93 Locate
psbZ gene + 35563 35751 189 Locate
trnG-GCC gene + 35996 36066 71 Locate
trnM-CAU gene − 36255 36328 74 Locate
rps14 gene − 36474 36776 303 Locate
psaB gene − 36899 39103 2205 Locate
psaA gene − 39129 41381 2253 Locate
ycf3 gene − 42149 44089 1941 Locate
trnS-GGA gene + 44953 45039 87 Locate
rps4 gene − 45336 45941 606 Locate
trnT-UGU gene − 46365 46437 73 Locate
trnL-UAA gene + 47125 47668 544 Locate
trnF-GAA gene + 47962 48034 73 Locate
ndhJ gene − 48708 49184 477 Locate
ndhK gene − 49295 49972 678 Locate
ndhC gene − 50024 50386 363 Locate
trnM-CAU gene + 52179 52251 73 Locate
atpE gene − 52452 52853 402 Locate
atpB gene − 52850 54346 1497 Locate
rbcL gene + 55117 56571 1455 Locate
accD gene + 57207 58757 1551 Locate
psaI gene + 59457 59567 111 Locate
ycf4 gene + 60014 60568 555 Locate
cemA gene + 61159 61848 690 Locate
petA gene + 62063 63025 963 Locate
psbJ gene − 64064 64186 123 Locate
psbL gene − 64321 64437 117 Locate
psbF gene − 64461 64580 120 Locate
psbE gene − 64595 64846 252 Locate
petL gene + 65739 65834 96 Locate
petG gene + 66009 66122 114 Locate
trnW-CCA gene − 66245 66318 74 Locate
trnP-UGG gene − 66487 66560 74 Locate
psaJ gene + 66842 66976 135 Locate
rpl33 gene + 67439 67639 201 Locate
rps18 gene + 67806 68111 306 Locate
rpl20 gene − 68347 68733 387 Locate
rps12 gene − 69468 69581 114 Locate
clpP gene − 69700 71615 1916 Locate
psbB gene + 72088 73614 1527 Locate
psbT gene + 73799 73900 102 Locate
psbN gene − 73966 74097 132 Locate
psbH gene + 74203 74421 219 Locate
petB gene + 74547 75913 1367 Locate
petD gene + 76102 77294 1193 Locate
rpoA gene − 77471 78478 1008 Locate
rps11 gene − 78550 78966 417 Locate
rpl36 gene − 79082 79195 114 Locate
infA gene − 79291 79524 234 Locate
rps8 gene − 79652 80056 405 Locate
rpl14 gene − 80239 80607 369 Locate
rpl16 gene − 80741 82008 1268 Locate
rps3 gene − 82152 82814 663 Locate
rpl22 gene − 82799 83272 474 Locate
rps19 gene − 83337 83615 279 Locate
rpl2 gene − 83683 85161 1479 Locate
rpl23 gene − 85180 85461 282 Locate
trnI-CAU gene − 85627 85700 74 Locate
ycf2 gene + 85795 92625 6831 Locate
ycf15 gene + 92815 92964 150 Locate
trnL-CAA gene − 93225 93305 81 Locate
ndhB gene − 93877 96084 2208 Locate
rps7 gene − 96355 96822 468 Locate
rps12 gene − 96876 97668 793 Locate
trnV-GAC gene + 99330 99401 72 Locate
rrn16 gene + 99628 101118 1491 Locate
trnI-GAU gene + 101416 102434 1019 Locate
trnA-UGC gene + 102499 103377 879 Locate
rrn23 gene + 103549 106359 2811 Locate
rrn4.5 gene − 106458 106722 265 Locate
rrn5 gene + 106816 106946 131 Locate
trnR-ACG gene + 107180 107253 74 Locate
trnN-GUU gene − 107820 107891 72 Locate
ycf1 gene + 108233 109363 1131 Locate
ndhF gene − 109257 111494 2238 Locate
rpl32 gene + 111963 112133 171 Locate
trnL-UAG gene + 112897 112976 80 Locate
ccsA gene + 113065 114036 972 Locate
ndhD gene − 114268 115797 1530 Locate
psaC gene − 115888 116133 246 Locate
ndhE gene − 116389 116694 306 Locate
ndhG gene − 116909 117439 531 Locate
ndhI gene − 117799 118305 507 Locate
ndhA gene − 118386 120509 2124 Locate
ndhH gene − 120511 121692 1182 Locate
rps15 gene − 121807 122079 273 Locate
ycf1 gene − 122519 128041 5523 Locate
trnN-GUU gene + 128383 128454 72 Locate
trnR-ACG gene − 129021 129094 74 Locate
rrn5 gene − 129328 129458 131 Locate
rrn4.5 gene + 129552 129816 265 Locate
rrn23 gene − 129915 132725 2811 Locate
trnA-UGC gene − 132897 133775 879 Locate
trnI-GAU gene − 133840 134858 1019 Locate
rrn16 gene − 135156 136646 1491 Locate
trnV-GAC gene − 136873 136944 72 Locate
rps12 gene + 138606 139398 793 Locate
rps7 gene + 139452 139919 468 Locate
ndhB gene + 140190 142397 2208 Locate
trnL-CAA gene + 142969 143049 81 Locate
ycf15 gene − 143310 143459 150 Locate
ycf2 gene − 143649 150479 6831 Locate
trnI-CAU gene + 150574 150647 74 Locate
rpl23 gene + 150813 151094 282 Locate
rpl2 gene + 151113 152591 1479 Locate
Status Available
Accession NC_067781.1
Length 152,701 bp
GC content 37.6%
Annotated genes 132
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources