Coordinate-aware organelle record

Isodon japonicus chloroplast genome

Available NC_067782.1 152,238 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	316	1375	1059
trnK-UUU	gene	translation-rna	−	1605	4187	2582
matK	gene	other	−	1926	3447	1521
rps16	gene	ribosomal-protein	−	4724	5866	1142
trnQ-UUG	gene	translation-rna	−	6718	6790	72
psbK	gene	photosystem-ii	+	7184	7370	186
psbI	gene	photosystem-ii	+	7760	7871	111
trnS-GCU	gene	translation-rna	−	7887	7975	88
trnT-CGU	gene	translation-rna	+	8640	9401	761
trnR-UCU	gene	translation-rna	+	9590	9662	72
atpA	gene	atp-synthase	−	9766	11290	1524
atpF	gene	atp-synthase	−	11389	12637	1248
atpH	gene	atp-synthase	−	12928	13174	246
atpI	gene	atp-synthase	−	14117	14861	744
rps2	gene	ribosomal-protein	−	15086	15797	711
rpoC2	gene	rna-polymerase	−	16010	20186	4176
rpoC1	gene	rna-polymerase	−	20362	23203	2841
rpoB	gene	rna-polymerase	−	23229	26442	3213
trnC-GCA	gene	translation-rna	+	27633	27704	71
petN	gene	cytochrome	+	27866	27956	90
psbM	gene	photosystem-ii	−	28953	29058	105
trnD-GUC	gene	translation-rna	−	29576	29650	74
trnY-GUA	gene	translation-rna	−	29760	29844	84
trnE-UUC	gene	translation-rna	−	29921	29994	73
trnT-GGU	gene	translation-rna	+	30581	30653	72
psbD	gene	photosystem-ii	+	32025	33087	1062
psbC	gene	photosystem-ii	+	33034	34456	1422
trnS-UGA	gene	translation-rna	−	34691	34784	93
psbZ	gene	photosystem-ii	+	35124	35313	189
trnG-GCC	gene	translation-rna	+	35548	35619	71
trnM-CAU	gene	translation-rna	−	35791	35865	74
rps14	gene	ribosomal-protein	−	36009	36312	303
psaB	gene	photosystem-i	−	36434	38639	2205
psaA	gene	photosystem-i	−	38664	40917	2253
ycf3	gene	other	−	41709	43671	1962
trnS-GGA	gene	translation-rna	+	44515	44602	87
rps4	gene	ribosomal-protein	−	44890	45496	606
trnT-UGU	gene	translation-rna	−	45939	46012	73
trnL-UAA	gene	translation-rna	+	46705	47249	544
trnF-GAA	gene	translation-rna	+	47548	47621	73
ndhJ	gene	nad-dehydrogenase	−	48297	48774	477
ndhK	gene	nad-dehydrogenase	−	48884	49562	678
ndhC	gene	nad-dehydrogenase	−	49613	49976	363
trnM-CAU	gene	translation-rna	+	51769	51842	73
atpE	gene	atp-synthase	−	52047	52449	402
atpB	gene	atp-synthase	−	52445	53942	1497
rbcL	gene	other	+	54719	56186	1467
accD	gene	other	+	56799	58350	1551
psaI	gene	photosystem-i	+	59048	59159	111
ycf4	gene	other	+	59604	60159	555
cemA	gene	other	+	60744	61434	690
petA	gene	cytochrome	+	61648	62611	963
psbJ	gene	photosystem-ii	−	63616	63739	123
psbL	gene	photosystem-ii	−	63873	63990	117
psbF	gene	photosystem-ii	−	64013	64133	120
psbE	gene	photosystem-ii	−	64147	64399	252
petL	gene	cytochrome	+	65292	65388	96
petG	gene	cytochrome	+	65562	65676	114
trnW-CCA	gene	translation-rna	−	65798	65872	74
trnP-UGG	gene	translation-rna	−	66041	66115	74
psaJ	gene	photosystem-i	+	66398	66533	135
rpl33	gene	ribosomal-protein	+	66980	67181	201
rps18	gene	ribosomal-protein	+	67347	67653	306
rpl20	gene	ribosomal-protein	−	67893	68280	387
rps12	gene	ribosomal-protein	−	69011	97201	28190
rps12	gene	ribosomal-protein	+	69011	138970	69959
clpP	gene	other	−	69243	71165	1922
psbB	gene	photosystem-ii	+	71637	73164	1527
psbT	gene	photosystem-ii	+	73347	73449	102
psbN	gene	photosystem-ii	−	73514	73646	132
psbH	gene	photosystem-ii	+	73756	73975	219
petB	gene	cytochrome	+	74109	75466	1357
petD	gene	cytochrome	+	75654	76866	1212
rpoA	gene	rna-polymerase	−	77042	78050	1008
rps11	gene	ribosomal-protein	−	78121	78538	417
rpl36	gene	ribosomal-protein	−	78647	78761	114
infA	gene	other	−	78856	79090	234
rps8	gene	ribosomal-protein	−	79214	79619	405
rpl14	gene	ribosomal-protein	−	79792	80161	369
rpl16	gene	ribosomal-protein	−	80298	81566	1268
rps3	gene	ribosomal-protein	−	81718	82381	663
rpl22	gene	ribosomal-protein	−	82365	82839	474
rps19	gene	ribosomal-protein	−	82903	83182	279
rpl2	gene	ribosomal-protein	−	83250	84729	1479
rpl23	gene	ribosomal-protein	−	84747	85029	282
trnI-CAU	gene	translation-rna	−	85194	85268	74
ycf2	gene	other	+	85362	92166	6804
ycf15	gene	other	+	92355	92505	150
trnL-CAA	gene	translation-rna	−	92765	92846	81
ndhB	gene	nad-dehydrogenase	−	93408	95616	2208
rps7	gene	ribosomal-protein	−	95886	96354	468
trnV-GAC	gene	translation-rna	+	98873	98945	72
rrn16	gene	ribosomal-rna	+	99171	100662	1491
trnI-GAU	gene	translation-rna	+	100959	101978	1019
trnA-UGC	gene	translation-rna	+	102042	102921	879
rrn23	gene	ribosomal-rna	+	103084	105895	2811
rrn4.5	gene	ribosomal-rna	−	105993	106258	265
rrn5	gene	ribosomal-rna	+	106351	106482	131
trnR-ACG	gene	translation-rna	+	106715	106789	74
trnN-GUU	gene	translation-rna	−	107361	107433	72
ycf1	gene	other	+	107773	108904	1131
ndhF	gene	nad-dehydrogenase	−	108797	111029	2232
rpl32	gene	ribosomal-protein	+	111513	111684	171
trnL-UAG	gene	translation-rna	+	112440	112520	80
ccsA	gene	other	+	112607	113579	972
ndhD	gene	nad-dehydrogenase	−	113802	115332	1530
psaC	gene	photosystem-i	−	115422	115668	246
ndhE	gene	nad-dehydrogenase	−	115923	116229	306
ndhG	gene	nad-dehydrogenase	−	116443	116974	531
ndhI	gene	nad-dehydrogenase	−	117342	117849	507
ndhA	gene	nad-dehydrogenase	−	117929	120039	2110
ndhH	gene	nad-dehydrogenase	−	120040	121222	1182
rps15	gene	ribosomal-protein	−	121336	121600	264
ycf1	gene	other	−	122039	127604	5565
trnN-GUU	gene	translation-rna	+	127944	128016	72
trnR-ACG	gene	translation-rna	−	128588	128662	74
rrn5	gene	ribosomal-rna	−	128895	129026	131
rrn4.5	gene	ribosomal-rna	+	129119	129384	265
rrn23	gene	ribosomal-rna	−	129482	132293	2811
trnA-UGC	gene	translation-rna	−	132456	133335	879
trnI-GAU	gene	translation-rna	−	133399	134418	1019
rrn16	gene	ribosomal-rna	−	134715	136206	1491
trnV-GAC	gene	translation-rna	−	136432	136504	72
rps7	gene	ribosomal-protein	+	139023	139491	468
ndhB	gene	nad-dehydrogenase	+	139761	141969	2208
trnL-CAA	gene	translation-rna	+	142531	142612	81
ycf15	gene	other	−	142872	143022	150
ycf2	gene	other	−	143211	150015	6804
trnI-CAU	gene	translation-rna	+	150109	150183	74
rpl23	gene	ribosomal-protein	+	150348	150630	282
rpl2	gene	ribosomal-protein	+	150648	152127	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067782.1DNA · accDNC_067782DNA · atpBNC_067782DNA · matKNC_067782DNA · ndhFNC_067782DNA · psbANC_067782DNA · rbcLNC_067782DNA · rps12NC_067782DNA · ycf1NC_067782