Lagochilus grandiflorus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ180378.1 · 2–75 bp · −
psbA · PQ180378.1 · 345–1,403 bp · −
trnK-UUU · PQ180378.1 · 1,636–4,222 bp · −
matK · PQ180378.1 · 1,937–3,472 bp · −
rps16 · PQ180378.1 · 4,945–6,083 bp · −
trnQ-UUG · PQ180378.1 · 7,097–7,168 bp · −
trnS-GGA · PQ180378.1 · 8,301–8,388 bp · −
atpA · PQ180378.1 · 10,138–11,661 bp · −
atpF · PQ180378.1 · 11,750–12,974 bp · −
atpH · PQ180378.1 · 13,335–13,580 bp · −
atpI · PQ180378.1 · 14,556–15,299 bp · −
rps2 · PQ180378.1 · 15,530–16,240 bp · −
rpoC2 · PQ180378.1 · 16,573–20,646 bp · −
rpoC1 · PQ180378.1 · 20,801–23,628 bp · −
rpoB · PQ180378.1 · 23,655–26,867 bp · −
psbM · PQ180378.1 · 29,722–29,826 bp · −
trnD-GUC · PQ180378.1 · 30,363–30,436 bp · −
trnY-GUA · PQ180378.1 · 30,550–30,633 bp · −
trnE-UUC · PQ180378.1 · 30,693–30,765 bp · −
trnT-CGU · PQ180378.1 · 31,355–31,426 bp · −
trnS-UGA · PQ180378.1 · 35,341–35,433 bp · −
trnfM-CAU · PQ180378.1 · 36,396–36,469 bp · −
rps14 · PQ180378.1 · 36,619–36,921 bp · −
psaB · PQ180378.1 · 37,006–39,210 bp · −
psaA · PQ180378.1 · 39,236–41,488 bp · −
ycf3 · PQ180378.1 · 42,072–44,011 bp · −
rps4 · PQ180378.1 · 44,704–45,309 bp · −
trnT-UGU · PQ180378.1 · 45,705–45,777 bp · −
ndhJ · PQ180378.1 · 48,059–48,553 bp · −
ndhK · PQ180378.1 · 48,636–49,313 bp · −
ndhC · PQ180378.1 · 49,367–49,729 bp · −
trnV-UAC · PQ180378.1 · 50,685–51,337 bp · −
atpE · PQ180378.1 · 51,816–52,217 bp · −
atpB · PQ180378.1 · 52,214–53,710 bp · −
psbJ · PQ180378.1 · 63,062–63,184 bp · −
psbL · PQ180378.1 · 63,317–63,433 bp · −
psbF · PQ180378.1 · 63,457–63,576 bp · −
psbE · PQ180378.1 · 63,591–63,842 bp · −
trnW-CCA · PQ180378.1 · 65,302–65,375 bp · −
trnP-UGG · PQ180378.1 · 65,543–65,616 bp · −
rpl20 · PQ180378.1 · 67,364–67,750 bp · −
rps12 · PQ180378.1 · 68,510–68,623 bp · −
rps12 · PQ180378.1 · 95,845–96,638 bp · −
clpP · PQ180378.1 · 68,749–70,622 bp · −
psbN · PQ180378.1 · 72,939–73,070 bp · −
rpoA · PQ180378.1 · 76,500–77,513 bp · −
rps11 · PQ180378.1 · 77,585–78,016 bp · −
rpl36 · PQ180378.1 · 78,104–78,217 bp · −
infA · PQ180378.1 · 78,313–78,546 bp · −
rps8 · PQ180378.1 · 78,668–79,081 bp · −
rpl14 · PQ180378.1 · 79,254–79,622 bp · −
rpl16 · PQ180378.1 · 79,749–81,033 bp · −
rps3 · PQ180378.1 · 81,171–81,833 bp · −
rpl22 · PQ180378.1 · 81,818–82,291 bp · −
rps19 · PQ180378.1 · 82,351–82,629 bp · −
rpl2 · PQ180378.1 · 82,681–84,172 bp · −
rpl23 · PQ180378.1 · 84,207–84,464 bp · −
trnI-CAU · PQ180378.1 · 84,630–84,703 bp · −
trnL-CAA · PQ180378.1 · 92,213–92,293 bp · −
ndhB · PQ180378.1 · 92,838–95,049 bp · −
rps7 · PQ180378.1 · 95,324–95,791 bp · −
trnN-GUU · PQ180378.1 · 106,757–106,828 bp · −
ndhF · PQ180378.1 · 108,218–110,440 bp · −
ndhD · PQ180378.1 · 113,167–114,693 bp · −
psaC · PQ180378.1 · 114,794–115,039 bp · −
ndhE · PQ180378.1 · 115,299–115,604 bp · −
ndhG · PQ180378.1 · 115,820–116,350 bp · −
ndhI · PQ180378.1 · 116,715–117,221 bp · −
ndhA · PQ180378.1 · 117,308–119,462 bp · −
ndhH · PQ180378.1 · 119,464–120,645 bp · −
rps15 · PQ180378.1 · 120,746–121,018 bp · −
ycf1 · PQ180378.1 · 121,450–126,966 bp · −
trnR-ACG · PQ180378.1 · 127,938–128,016 bp · −
rrn5 · PQ180378.1 · 128,246–128,366 bp · −
rrn4.5 · PQ180378.1 · 128,622–128,724 bp · −
rrn23 · PQ180378.1 · 128,823–131,633 bp · −
trnA-UGC · PQ180378.1 · 131,825–132,703 bp · −
trnI-GAU · PQ180378.1 · 132,768–133,783 bp · −
rrn16 · PQ180378.1 · 134,073–135,563 bp · −
trnV-GAC · PQ180378.1 · 135,791–135,862 bp · −
ycf15 · PQ180378.1 · 142,168–142,416 bp · −
ycf2 · PQ180378.1 · 142,456–149,328 bp · −
psbK · PQ180378.1 · 7,505–7,690 bp · +
psbI · PQ180378.1 · 8,067–8,177 bp · +
trnG-UCC · PQ180378.1 · 9,034–9,793 bp · +
trnR-UCU · PQ180378.1 · 9,967–10,041 bp · +
trnC-GCA · PQ180378.1 · 27,949–28,024 bp · +
petN · PQ180378.1 · 28,849–28,938 bp · +
psbD · PQ180378.1 · 32,680–33,741 bp · +
psbC · PQ180378.1 · 33,689–35,110 bp · +
psbZ · PQ180378.1 · 35,760–35,948 bp · +
trnG-GCC · PQ180378.1 · 36,180–36,250 bp · +
trnS-GGA · PQ180378.1 · 44,333–44,419 bp · +
trnL-UAA · PQ180378.1 · 46,453–47,032 bp · +
trnF-GAA · PQ180378.1 · 47,324–47,396 bp · +
trnM-CAU · PQ180378.1 · 51,526–51,598 bp · +
rbcL · PQ180378.1 · 54,504–55,970 bp · +
accD · PQ180378.1 · 56,677–58,143 bp · +
psaI · PQ180378.1 · 58,495–58,605 bp · +
ycf4 · PQ180378.1 · 59,035–59,589 bp · +
cemA · PQ180378.1 · 60,150–60,839 bp · +
petA · PQ180378.1 · 61,056–62,018 bp · +
petL · PQ180378.1 · 64,785–64,880 bp · +
petG · PQ180378.1 · 65,055–65,168 bp · +
psaJ · PQ180378.1 · 65,891–66,025 bp · +
rpl33 · PQ180378.1 · 66,489–66,689 bp · +
rps18 · PQ180378.1 · 66,847–67,152 bp · +
rps12 · PQ180378.1 · 137,482–138,275 bp · +
psbB · PQ180378.1 · 71,053–72,579 bp · +
psbT · PQ180378.1 · 72,771–72,878 bp · +
psbH · PQ180378.1 · 73,174–73,395 bp · +
petB · PQ180378.1 · 73,520–74,903 bp · +
petD · PQ180378.1 · 75,098–76,331 bp · +
ycf2 · PQ180378.1 · 84,792–91,664 bp · +
ycf15 · PQ180378.1 · 91,704–91,952 bp · +
trnV-GAC · PQ180378.1 · 98,258–98,329 bp · +
rrn16 · PQ180378.1 · 98,557–100,047 bp · +
trnI-GAU · PQ180378.1 · 100,337–101,352 bp · +
trnA-UGC · PQ180378.1 · 101,417–102,295 bp · +
rrn23 · PQ180378.1 · 102,487–105,297 bp · +
rrn4.5 · PQ180378.1 · 105,396–105,498 bp · +
rrn5 · PQ180378.1 · 105,754–105,874 bp · +
trnR-ACG · PQ180378.1 · 106,104–106,182 bp · +
rpl32 · PQ180378.1 · 110,945–111,121 bp · +
trnL-UAG · PQ180378.1 · 111,848–111,927 bp · +
ccsA · PQ180378.1 · 112,025–112,996 bp · +
trnN-GUU · PQ180378.1 · 127,292–127,363 bp · +
rps7 · PQ180378.1 · 138,329–138,796 bp · +
ndhB · PQ180378.1 · 139,071–141,282 bp · +
trnL-CAA · PQ180378.1 · 141,827–141,907 bp · +
trnI-CAU · PQ180378.1 · 149,417–149,490 bp · +
rpl23 · PQ180378.1 · 149,656–149,913 bp · +
rpl2 · PQ180378.1 · 149,948–151,439 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lagochilus grandiflorus
ANNOTATED PLASTOME
PQ180378.1
151,532 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37883 75766 113649 151532 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GGA atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnT-CGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 345 1403 1059 Locate
trnK-UUU gene − 1636 4222 2587 Locate
matK gene − 1937 3472 1536 Locate
rps16 gene − 4945 6083 1139 Locate
trnQ-UUG gene − 7097 7168 72 Locate
psbK gene + 7505 7690 186 Locate
psbI gene + 8067 8177 111 Locate
trnS-GGA gene − 8301 8388 88 Locate
trnG-UCC gene + 9034 9793 760 Locate
trnR-UCU gene + 9967 10041 75 Locate
atpA gene − 10138 11661 1524 Locate
atpF gene − 11750 12974 1225 Locate
atpH gene − 13335 13580 246 Locate
atpI gene − 14556 15299 744 Locate
rps2 gene − 15530 16240 711 Locate
rpoC2 gene − 16573 20646 4074 Locate
rpoC1 gene − 20801 23628 2828 Locate
rpoB gene − 23655 26867 3213 Locate
trnC-GCA gene + 27949 28024 76 Locate
petN gene + 28849 28938 90 Locate
psbM gene − 29722 29826 105 Locate
trnD-GUC gene − 30363 30436 74 Locate
trnY-GUA gene − 30550 30633 84 Locate
trnE-UUC gene − 30693 30765 73 Locate
trnT-CGU gene − 31355 31426 72 Locate
psbD gene + 32680 33741 1062 Locate
psbC gene + 33689 35110 1422 Locate
trnS-UGA gene − 35341 35433 93 Locate
psbZ gene + 35760 35948 189 Locate
trnG-GCC gene + 36180 36250 71 Locate
trnfM-CAU gene − 36396 36469 74 Locate
rps14 gene − 36619 36921 303 Locate
psaB gene − 37006 39210 2205 Locate
psaA gene − 39236 41488 2253 Locate
ycf3 gene − 42072 44011 1940 Locate
trnS-GGA gene + 44333 44419 87 Locate
rps4 gene − 44704 45309 606 Locate
trnT-UGU gene − 45705 45777 73 Locate
trnL-UAA gene + 46453 47032 580 Locate
trnF-GAA gene + 47324 47396 73 Locate
ndhJ gene − 48059 48553 495 Locate
ndhK gene − 48636 49313 678 Locate
ndhC gene − 49367 49729 363 Locate
trnV-UAC gene − 50685 51337 653 Locate
trnM-CAU gene + 51526 51598 73 Locate
atpE gene − 51816 52217 402 Locate
atpB gene − 52214 53710 1497 Locate
rbcL gene + 54504 55970 1467 Locate
accD gene + 56677 58143 1467 Locate
psaI gene + 58495 58605 111 Locate
ycf4 gene + 59035 59589 555 Locate
cemA gene + 60150 60839 690 Locate
petA gene + 61056 62018 963 Locate
psbJ gene − 63062 63184 123 Locate
psbL gene − 63317 63433 117 Locate
psbF gene − 63457 63576 120 Locate
psbE gene − 63591 63842 252 Locate
petL gene + 64785 64880 96 Locate
petG gene + 65055 65168 114 Locate
trnW-CCA gene − 65302 65375 74 Locate
trnP-UGG gene − 65543 65616 74 Locate
psaJ gene + 65891 66025 135 Locate
rpl33 gene + 66489 66689 201 Locate
rps18 gene + 66847 67152 306 Locate
rpl20 gene − 67364 67750 387 Locate
rps12 gene − 68510 68623 114 Locate
clpP gene − 68749 70622 1874 Locate
psbB gene + 71053 72579 1527 Locate
psbT gene + 72771 72878 108 Locate
psbN gene − 72939 73070 132 Locate
psbH gene + 73174 73395 222 Locate
petB gene + 73520 74903 1384 Locate
petD gene + 75098 76331 1234 Locate
rpoA gene − 76500 77513 1014 Locate
rps11 gene − 77585 78016 432 Locate
rpl36 gene − 78104 78217 114 Locate
infA gene − 78313 78546 234 Locate
rps8 gene − 78668 79081 414 Locate
rpl14 gene − 79254 79622 369 Locate
rpl16 gene − 79749 81033 1285 Locate
rps3 gene − 81171 81833 663 Locate
rpl22 gene − 81818 82291 474 Locate
rps19 gene − 82351 82629 279 Locate
rpl2 gene − 82681 84172 1492 Locate
rpl23 gene − 84207 84464 258 Locate
trnI-CAU gene − 84630 84703 74 Locate
ycf2 gene + 84792 91664 6873 Locate
ycf15 gene + 91704 91952 249 Locate
trnL-CAA gene − 92213 92293 81 Locate
ndhB gene − 92838 95049 2212 Locate
rps7 gene − 95324 95791 468 Locate
rps12 gene − 95845 96638 794 Locate
trnV-GAC gene + 98258 98329 72 Locate
rrn16 gene + 98557 100047 1491 Locate
trnI-GAU gene + 100337 101352 1016 Locate
trnA-UGC gene + 101417 102295 879 Locate
rrn23 gene + 102487 105297 2811 Locate
rrn4.5 gene + 105396 105498 103 Locate
rrn5 gene + 105754 105874 121 Locate
trnR-ACG gene + 106104 106182 79 Locate
trnN-GUU gene − 106757 106828 72 Locate
ndhF gene − 108218 110440 2223 Locate
rpl32 gene + 110945 111121 177 Locate
trnL-UAG gene + 111848 111927 80 Locate
ccsA gene + 112025 112996 972 Locate
ndhD gene − 113167 114693 1527 Locate
psaC gene − 114794 115039 246 Locate
ndhE gene − 115299 115604 306 Locate
ndhG gene − 115820 116350 531 Locate
ndhI gene − 116715 117221 507 Locate
ndhA gene − 117308 119462 2155 Locate
ndhH gene − 119464 120645 1182 Locate
rps15 gene − 120746 121018 273 Locate
ycf1 gene − 121450 126966 5517 Locate
trnN-GUU gene + 127292 127363 72 Locate
trnR-ACG gene − 127938 128016 79 Locate
rrn5 gene − 128246 128366 121 Locate
rrn4.5 gene − 128622 128724 103 Locate
rrn23 gene − 128823 131633 2811 Locate
trnA-UGC gene − 131825 132703 879 Locate
trnI-GAU gene − 132768 133783 1016 Locate
rrn16 gene − 134073 135563 1491 Locate
trnV-GAC gene − 135791 135862 72 Locate
rps12 gene + 137482 138275 794 Locate
rps7 gene + 138329 138796 468 Locate
ndhB gene + 139071 141282 2212 Locate
trnL-CAA gene + 141827 141907 81 Locate
ycf15 gene − 142168 142416 249 Locate
ycf2 gene − 142456 149328 6873 Locate
trnI-CAU gene + 149417 149490 74 Locate
rpl23 gene + 149656 149913 258 Locate
rpl2 gene + 149948 151439 1492 Locate
Status Available
Accession PQ180378.1
Length 151,532 bp
GC content 38.5%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources