Coordinate-aware organelle record

Lagochilus hirtus chloroplast genome

Available PQ180379.1 151,368 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	315	1374	1059
trnK-UUU	gene	translation-rna	−	1606	4194	2588
matK	gene	other	−	1907	3443	1536
rps16	gene	ribosomal-protein	−	4914	6053	1139
trnQ-UUG	gene	translation-rna	−	7079	7151	72
psbK	gene	photosystem-ii	+	7487	7673	186
psbI	gene	photosystem-ii	+	8054	8165	111
trnS-GGA	gene	translation-rna	−	8288	8376	88
trnG-UCC	gene	translation-rna	+	9020	9781	761
trnR-UCU	gene	translation-rna	+	9949	10024	75
atpA	gene	atp-synthase	−	10120	11644	1524
atpF	gene	atp-synthase	−	11732	12948	1216
atpH	gene	atp-synthase	−	13308	13554	246
atpI	gene	atp-synthase	−	14510	15254	744
rps2	gene	ribosomal-protein	−	15484	16195	711
rpoC2	gene	rna-polymerase	−	16527	20598	4071
rpoC1	gene	rna-polymerase	−	20752	23579	2827
rpoB	gene	rna-polymerase	−	23605	26818	3213
trnC-GCA	gene	translation-rna	+	27924	28000	76
petN	gene	cytochrome	+	28833	28923	90
psbM	gene	photosystem-ii	−	29701	29806	105
trnD-GUC	gene	translation-rna	−	30342	30416	74
trnY-GUA	gene	translation-rna	−	30529	30613	84
trnE-UUC	gene	translation-rna	−	30672	30745	73
trnT-CGU	gene	translation-rna	−	31341	31413	72
psbD	gene	photosystem-ii	+	32668	33730	1062
psbC	gene	photosystem-ii	+	33677	35099	1422
trnS-UGA	gene	translation-rna	−	35330	35423	93
psbZ	gene	photosystem-ii	+	35749	35938	189
trnG-GCC	gene	translation-rna	+	36169	36240	71
trnfM-CAU	gene	translation-rna	−	36388	36462	74
rps14	gene	ribosomal-protein	−	36611	36914	303
psaB	gene	photosystem-i	−	37042	39247	2205
psaA	gene	photosystem-i	−	39272	41525	2253
ycf3	gene	other	−	42104	44044	1940
trnS-GGA	gene	translation-rna	+	44359	44446	87
rps4	gene	ribosomal-protein	−	44729	45335	606
trnT-UGU	gene	translation-rna	−	45730	45803	73
trnL-UAA	gene	translation-rna	+	46483	47063	580
trnF-GAA	gene	translation-rna	+	47354	47427	73
ndhJ	gene	nad-dehydrogenase	−	48090	48585	495
ndhK	gene	nad-dehydrogenase	−	48667	49345	678
ndhC	gene	nad-dehydrogenase	−	49397	49760	363
trnV-UAC	gene	translation-rna	−	50716	51369	653
trnM-CAU	gene	translation-rna	+	51557	51630	73
atpE	gene	atp-synthase	−	51847	52249	402
atpB	gene	atp-synthase	−	52245	53742	1497
rbcL	gene	other	+	54533	56000	1467
accD	gene	other	+	56706	58173	1467
psaI	gene	photosystem-i	+	58384	58495	111
ycf4	gene	other	+	58925	59480	555
cemA	gene	other	+	60040	60730	690
petA	gene	cytochrome	+	60946	61909	963
psbJ	gene	photosystem-ii	−	62942	63065	123
psbL	gene	photosystem-ii	−	63202	63319	117
psbF	gene	photosystem-ii	−	63342	63462	120
psbE	gene	photosystem-ii	−	63476	63728	252
petL	gene	cytochrome	+	64670	64766	96
petG	gene	cytochrome	+	64940	65054	114
trnW-CCA	gene	translation-rna	−	65187	65261	74
trnP-UGG	gene	translation-rna	−	65428	65502	74
psaJ	gene	photosystem-i	+	65776	65911	135
rpl33	gene	ribosomal-protein	+	66383	66584	201
rps18	gene	ribosomal-protein	+	66740	67046	306
rpl20	gene	ribosomal-protein	−	67257	67644	387
rps12	gene	ribosomal-protein	−	68404	96533	28129
rps12	gene	ribosomal-protein	+	68404	138109	69705
clpP	gene	other	−	68643	70506	1863
psbB	gene	photosystem-ii	+	70936	72463	1527
psbT	gene	photosystem-ii	+	72654	72762	108
psbN	gene	photosystem-ii	−	72822	72954	132
psbH	gene	photosystem-ii	+	73057	73279	222
petB	gene	cytochrome	+	73399	74783	1384
petD	gene	cytochrome	+	74977	76211	1234
rpoA	gene	rna-polymerase	−	76379	77393	1014
rps11	gene	ribosomal-protein	−	77464	77896	432
rpl36	gene	ribosomal-protein	−	77983	78097	114
infA	gene	other	−	78192	78426	234
rps8	gene	ribosomal-protein	−	78548	78962	414
rpl14	gene	ribosomal-protein	−	79129	79498	369
rpl16	gene	ribosomal-protein	−	79624	80917	1293
rps3	gene	ribosomal-protein	−	81063	81726	663
rpl22	gene	ribosomal-protein	−	81710	82184	474
rps19	gene	ribosomal-protein	−	82243	82522	279
rpl2	gene	ribosomal-protein	−	82573	84065	1492
rpl23	gene	ribosomal-protein	−	84083	84365	282
trnI-CAU	gene	translation-rna	−	84530	84604	74
ycf2	gene	other	+	84692	91559	6867
ycf15	gene	other	+	91598	91847	249
trnL-CAA	gene	translation-rna	−	92107	92188	81
ndhB	gene	nad-dehydrogenase	−	92732	94944	2212
rps7	gene	ribosomal-protein	−	95218	95686	468
trnV-GAC	gene	translation-rna	+	98133	98205	72
rrn16	gene	ribosomal-rna	+	98432	99923	1491
trnI-GAU	gene	translation-rna	+	100212	101228	1016
trnA-UGC	gene	translation-rna	+	101292	102171	879
rrn23	gene	ribosomal-rna	+	102362	105173	2811
rrn4.5	gene	ribosomal-rna	+	105271	105374	103
rrn5	gene	ribosomal-rna	+	105629	105750	121
trnR-ACG	gene	translation-rna	+	105979	106058	79
trnN-GUU	gene	translation-rna	−	106630	106702	72
ndhF	gene	nad-dehydrogenase	−	108091	110314	2223
rpl32	gene	ribosomal-protein	+	110817	110994	177
trnL-UAG	gene	translation-rna	+	111714	111794	80
ccsA	gene	other	+	111884	112856	972
ndhD	gene	nad-dehydrogenase	−	113026	114553	1527
psaC	gene	photosystem-i	−	114653	114899	246
ndhE	gene	nad-dehydrogenase	−	115158	115464	306
ndhG	gene	nad-dehydrogenase	−	115679	116210	531
ndhI	gene	nad-dehydrogenase	−	116563	117070	507
ndhA	gene	nad-dehydrogenase	−	117156	119311	2155
ndhH	gene	nad-dehydrogenase	−	119312	120494	1182
rps15	gene	ribosomal-protein	−	120594	120867	273
ycf1	gene	other	−	121292	126821	5529
trnN-GUU	gene	translation-rna	+	127146	127218	72
trnR-ACG	gene	translation-rna	−	127790	127869	79
rrn5	gene	ribosomal-rna	−	128098	128219	121
rrn4.5	gene	ribosomal-rna	−	128474	128577	103
rrn23	gene	ribosomal-rna	−	128675	131486	2811
trnA-UGC	gene	translation-rna	−	131677	132556	879
trnI-GAU	gene	translation-rna	−	132620	133636	1016
rrn16	gene	ribosomal-rna	−	133925	135416	1491
trnV-GAC	gene	translation-rna	−	135643	135715	72
rps7	gene	ribosomal-protein	+	138162	138630	468
ndhB	gene	nad-dehydrogenase	+	138904	141116	2212
trnL-CAA	gene	translation-rna	+	141660	141741	81
ycf15	gene	other	−	142001	142250	249
ycf2	gene	other	−	142289	149156	6867
trnI-CAU	gene	translation-rna	+	149244	149318	74
rpl23	gene	ribosomal-protein	+	149483	149765	282
rpl2	gene	ribosomal-protein	+	149783	151275	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ180379.1DNA · accDPQ180379DNA · atpBPQ180379DNA · matKPQ180379DNA · ndhFPQ180379DNA · psbAPQ180379DNA · rbcLPQ180379DNA · rps12PQ180379DNA · ycf1PQ180379