Lagochilus inebrians chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV192925.1 · 2–76 bp · −
psbA · PV192925.1 · 316–1,374 bp · −
trnK-UUU · PV192925.1 · 1,607–4,184 bp · −
matK · PV192925.1 · 1,908–3,434 bp · −
rps16 · PV192925.1 · 4,985–6,122 bp · −
trnQ-UUG · PV192925.1 · 6,908–6,979 bp · −
trnS-GCU · PV192925.1 · 8,113–8,200 bp · −
atpA · PV192925.1 · 9,985–11,508 bp · −
atpF · PV192925.1 · 11,596–12,805 bp · −
atpH · PV192925.1 · 13,172–13,417 bp · −
atpI · PV192925.1 · 14,393–15,136 bp · −
rps2 · PV192925.1 · 15,367–16,077 bp · −
rpoC2 · PV192925.1 · 16,398–20,468 bp · −
rpoC1 · PV192925.1 · 20,635–23,465 bp · −
rpoB · PV192925.1 · 23,492–26,704 bp · −
psbM · PV192925.1 · 29,514–29,618 bp · −
trnD-GUC · PV192925.1 · 30,081–30,154 bp · −
trnY-GUA · PV192925.1 · 30,268–30,351 bp · −
trnE-UUC · PV192925.1 · 30,411–30,483 bp · −
trnS-UGA · PV192925.1 · 34,633–34,725 bp · −
trnfM-CAU · PV192925.1 · 35,687–35,760 bp · −
rps14 · PV192925.1 · 35,910–36,212 bp · −
psaB · PV192925.1 · 36,340–38,544 bp · −
psaA · PV192925.1 · 38,570–40,822 bp · −
pafI · PV192925.1 · 41,406–43,344 bp · −
rps4 · PV192925.1 · 44,038–44,643 bp · −
trnT-UGU · PV192925.1 · 45,041–45,113 bp · −
ndhJ · PV192925.1 · 47,455–47,931 bp · −
ndhK · PV192925.1 · 48,032–48,772 bp · −
ndhC · PV192925.1 · 48,763–49,125 bp · −
trnV-UAC · PV192925.1 · 50,082–50,735 bp · −
atpE · PV192925.1 · 51,214–51,615 bp · −
atpB · PV192925.1 · 51,612–53,108 bp · −
psbJ · PV192925.1 · 62,457–62,579 bp · −
psbL · PV192925.1 · 62,717–62,833 bp · −
psbF · PV192925.1 · 62,857–62,976 bp · −
psbE · PV192925.1 · 62,991–63,242 bp · −
trnW-CCA · PV192925.1 · 64,709–64,782 bp · −
trnP-UGG · PV192925.1 · 64,950–65,023 bp · −
rpl20 · PV192925.1 · 66,796–67,152 bp · −
rps12 · PV192925.1 · 67,912–68,025 bp · −
clpP1 · PV192925.1 · 68,112–69,984 bp · −
pbf1 · PV192925.1 · 72,308–72,439 bp · −
rpoA · PV192925.1 · 75,841–76,854 bp · −
rps11 · PV192925.1 · 76,926–77,342 bp · −
rpl36 · PV192925.1 · 77,445–77,558 bp · −
infA · PV192925.1 · 77,654–77,887 bp · −
rps8 · PV192925.1 · 78,009–78,422 bp · −
rpl14 · PV192925.1 · 78,595–78,963 bp · −
rpl16 · PV192925.1 · 79,090–80,382 bp · −
rps3 · PV192925.1 · 80,529–81,191 bp · −
rpl22 · PV192925.1 · 81,176–81,655 bp · −
rps19 · PV192925.1 · 81,715–81,864 bp · −
rpl2 · PV192925.1 · 82,045–83,536 bp · −
rpl23 · PV192925.1 · 83,555–83,836 bp · −
trnI-CAU · PV192925.1 · 84,002–84,075 bp · −
trnL-CAA · PV192925.1 · 91,573–91,653 bp · −
ndhB · PV192925.1 · 92,198–94,409 bp · −
rps7 · PV192925.1 · 94,684–95,151 bp · −
trnN-GUU · PV192925.1 · 106,063–106,134 bp · −
ndhF · PV192925.1 · 107,524–109,746 bp · −
ndhD · PV192925.1 · 112,474–113,883 bp · −
psaC · PV192925.1 · 114,095–114,340 bp · −
ndhE · PV192925.1 · 114,600–114,905 bp · −
ndhG · PV192925.1 · 115,121–115,651 bp · −
ndhI · PV192925.1 · 116,007–116,513 bp · −
ndhA · PV192925.1 · 116,600–118,763 bp · −
ndhH · PV192925.1 · 118,765–119,946 bp · −
rps15 · PV192925.1 · 120,047–120,319 bp · −
ycf1 · PV192925.1 · 120,748–126,255 bp · −
trnR-ACG · PV192925.1 · 127,224–127,297 bp · −
rrn5 · PV192925.1 · 127,532–127,652 bp · −
rrn4.5 · PV192925.1 · 127,908–128,010 bp · −
rrn23 · PV192925.1 · 128,308–130,919 bp · −
trnA-UGC · PV192925.1 · 131,111–131,958 bp · −
trnI-GAU · PV192925.1 · 132,023–133,031 bp · −
rrn16 · PV192925.1 · 133,308–134,798 bp · −
trnV-GAC · PV192925.1 · 135,027–135,098 bp · −
ycf2 · PV192925.1 · 141,694–148,551 bp · −
psbK · PV192925.1 · 7,316–7,501 bp · +
psbI · PV192925.1 · 7,879–7,989 bp · +
trnG-UCC · PV192925.1 · 8,881–9,640 bp · +
trnR-UCU · PV192925.1 · 9,817–9,888 bp · +
trnC-GCA · PV192925.1 · 27,816–27,886 bp · +
petN · PV192925.1 · 28,707–28,796 bp · +
trnT-GGU · PV192925.1 · 31,075–31,146 bp · +
psbD · PV192925.1 · 31,973–33,034 bp · +
psbC · PV192925.1 · 32,982–34,403 bp · +
psbZ · PV192925.1 · 35,052–35,240 bp · +
trnG-GCC · PV192925.1 · 35,472–35,542 bp · +
trnS-GGA · PV192925.1 · 43,666–43,752 bp · +
trnL-UAA · PV192925.1 · 45,813–46,391 bp · +
trnF-GAA · PV192925.1 · 46,683–46,755 bp · +
trnM-CAU · PV192925.1 · 50,924–50,996 bp · +
rbcL · PV192925.1 · 53,922–55,367 bp · +
accD · PV192925.1 · 56,056–57,522 bp · +
psaI · PV192925.1 · 57,875–57,985 bp · +
pafII · PV192925.1 · 58,424–58,978 bp · +
cemA · PV192925.1 · 59,539–60,228 bp · +
petA · PV192925.1 · 60,445–61,407 bp · +
petL · PV192925.1 · 64,193–64,288 bp · +
petG · PV192925.1 · 64,463–64,576 bp · +
psaJ · PV192925.1 · 65,298–65,432 bp · +
rpl33 · PV192925.1 · 65,907–66,107 bp · +
rps18 · PV192925.1 · 66,249–66,554 bp · +
rps12 · PV192925.1 · 136,718–137,510 bp · +
psbB · PV192925.1 · 70,415–71,941 bp · +
psbT · PV192925.1 · 72,133–72,234 bp · +
psbH · PV192925.1 · 72,543–72,764 bp · +
petB · PV192925.1 · 72,889–74,270 bp · +
petD · PV192925.1 · 74,465–75,678 bp · +
ycf2 · PV192925.1 · 84,164–91,021 bp · +
trnV-GAC · PV192925.1 · 97,617–97,688 bp · +
rrn16 · PV192925.1 · 97,917–99,407 bp · +
trnI-GAU · PV192925.1 · 99,684–100,692 bp · +
trnA-UGC · PV192925.1 · 100,757–101,604 bp · +
rrn23 · PV192925.1 · 101,796–104,407 bp · +
rrn4.5 · PV192925.1 · 104,705–104,807 bp · +
rrn5 · PV192925.1 · 105,063–105,183 bp · +
trnR-ACG · PV192925.1 · 105,418–105,491 bp · +
ycf1 · PV192925.1 · 106,460–107,578 bp · +
rpl32 · PV192925.1 · 110,251–110,427 bp · +
trnL-UAG · PV192925.1 · 111,147–111,226 bp · +
ccsA · PV192925.1 · 111,324–112,295 bp · +
trnN-GUU · PV192925.1 · 126,581–126,652 bp · +
rps7 · PV192925.1 · 137,564–138,031 bp · +
ndhB · PV192925.1 · 138,306–140,517 bp · +
trnL-CAA · PV192925.1 · 141,062–141,142 bp · +
trnI-CAU · PV192925.1 · 148,640–148,713 bp · +
rpl23 · PV192925.1 · 148,879–149,160 bp · +
rpl2 · PV192925.1 · 149,179–150,670 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lagochilus inebrians
ANNOTATED PLASTOME
PV192925.1
150,763 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37691 75382 113072 150763 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 316 1374 1059 Locate
trnK-UUU gene − 1607 4184 2578 Locate
matK gene − 1908 3434 1527 Locate
rps16 gene − 4985 6122 1138 Locate
trnQ-UUG gene − 6908 6979 72 Locate
psbK gene + 7316 7501 186 Locate
psbI gene + 7879 7989 111 Locate
trnS-GCU gene − 8113 8200 88 Locate
trnG-UCC gene + 8881 9640 760 Locate
trnR-UCU gene + 9817 9888 72 Locate
atpA gene − 9985 11508 1524 Locate
atpF gene − 11596 12805 1210 Locate
atpH gene − 13172 13417 246 Locate
atpI gene − 14393 15136 744 Locate
rps2 gene − 15367 16077 711 Locate
rpoC2 gene − 16398 20468 4071 Locate
rpoC1 gene − 20635 23465 2831 Locate
rpoB gene − 23492 26704 3213 Locate
trnC-GCA gene + 27816 27886 71 Locate
petN gene + 28707 28796 90 Locate
psbM gene − 29514 29618 105 Locate
trnD-GUC gene − 30081 30154 74 Locate
trnY-GUA gene − 30268 30351 84 Locate
trnE-UUC gene − 30411 30483 73 Locate
trnT-GGU gene + 31075 31146 72 Locate
psbD gene + 31973 33034 1062 Locate
psbC gene + 32982 34403 1422 Locate
trnS-UGA gene − 34633 34725 93 Locate
psbZ gene + 35052 35240 189 Locate
trnG-GCC gene + 35472 35542 71 Locate
trnfM-CAU gene − 35687 35760 74 Locate
rps14 gene − 35910 36212 303 Locate
psaB gene − 36340 38544 2205 Locate
psaA gene − 38570 40822 2253 Locate
pafI gene − 41406 43344 1939 Locate
trnS-GGA gene + 43666 43752 87 Locate
rps4 gene − 44038 44643 606 Locate
trnT-UGU gene − 45041 45113 73 Locate
trnL-UAA gene + 45813 46391 579 Locate
trnF-GAA gene + 46683 46755 73 Locate
ndhJ gene − 47455 47931 477 Locate
ndhK gene − 48032 48772 741 Locate
ndhC gene − 48763 49125 363 Locate
trnV-UAC gene − 50082 50735 654 Locate
trnM-CAU gene + 50924 50996 73 Locate
atpE gene − 51214 51615 402 Locate
atpB gene − 51612 53108 1497 Locate
rbcL gene + 53922 55367 1446 Locate
accD gene + 56056 57522 1467 Locate
psaI gene + 57875 57985 111 Locate
pafII gene + 58424 58978 555 Locate
cemA gene + 59539 60228 690 Locate
petA gene + 60445 61407 963 Locate
psbJ gene − 62457 62579 123 Locate
psbL gene − 62717 62833 117 Locate
psbF gene − 62857 62976 120 Locate
psbE gene − 62991 63242 252 Locate
petL gene + 64193 64288 96 Locate
petG gene + 64463 64576 114 Locate
trnW-CCA gene − 64709 64782 74 Locate
trnP-UGG gene − 64950 65023 74 Locate
psaJ gene + 65298 65432 135 Locate
rpl33 gene + 65907 66107 201 Locate
rps18 gene + 66249 66554 306 Locate
rpl20 gene − 66796 67152 357 Locate
rps12 gene − 67912 68025 114 Locate
clpP1 gene − 68112 69984 1873 Locate
psbB gene + 70415 71941 1527 Locate
psbT gene + 72133 72234 102 Locate
pbf1 gene − 72308 72439 132 Locate
psbH gene + 72543 72764 222 Locate
petB gene + 72889 74270 1382 Locate
petD gene + 74465 75678 1214 Locate
rpoA gene − 75841 76854 1014 Locate
rps11 gene − 76926 77342 417 Locate
rpl36 gene − 77445 77558 114 Locate
infA gene − 77654 77887 234 Locate
rps8 gene − 78009 78422 414 Locate
rpl14 gene − 78595 78963 369 Locate
rpl16 gene − 79090 80382 1293 Locate
rps3 gene − 80529 81191 663 Locate
rpl22 gene − 81176 81655 480 Locate
rps19 gene − 81715 81864 150 Locate
rpl2 gene − 82045 83536 1492 Locate
rpl23 gene − 83555 83836 282 Locate
trnI-CAU gene − 84002 84075 74 Locate
ycf2 gene + 84164 91021 6858 Locate
trnL-CAA gene − 91573 91653 81 Locate
ndhB gene − 92198 94409 2212 Locate
rps7 gene − 94684 95151 468 Locate
trnV-GAC gene + 97617 97688 72 Locate
rrn16 gene + 97917 99407 1491 Locate
trnI-GAU gene + 99684 100692 1009 Locate
trnA-UGC gene + 100757 101604 848 Locate
rrn23 gene + 101796 104407 2612 Locate
rrn4.5 gene + 104705 104807 103 Locate
rrn5 gene + 105063 105183 121 Locate
trnR-ACG gene + 105418 105491 74 Locate
trnN-GUU gene − 106063 106134 72 Locate
ycf1 gene + 106460 107578 1119 Locate
ndhF gene − 107524 109746 2223 Locate
rpl32 gene + 110251 110427 177 Locate
trnL-UAG gene + 111147 111226 80 Locate
ccsA gene + 111324 112295 972 Locate
ndhD gene − 112474 113883 1410 Locate
psaC gene − 114095 114340 246 Locate
ndhE gene − 114600 114905 306 Locate
ndhG gene − 115121 115651 531 Locate
ndhI gene − 116007 116513 507 Locate
ndhA gene − 116600 118763 2164 Locate
ndhH gene − 118765 119946 1182 Locate
rps15 gene − 120047 120319 273 Locate
ycf1 gene − 120748 126255 5508 Locate
trnN-GUU gene + 126581 126652 72 Locate
trnR-ACG gene − 127224 127297 74 Locate
rrn5 gene − 127532 127652 121 Locate
rrn4.5 gene − 127908 128010 103 Locate
rrn23 gene − 128308 130919 2612 Locate
trnA-UGC gene − 131111 131958 848 Locate
trnI-GAU gene − 132023 133031 1009 Locate
rrn16 gene − 133308 134798 1491 Locate
trnV-GAC gene − 135027 135098 72 Locate
rps12 gene + 136718 137510 793 Locate
rps7 gene + 137564 138031 468 Locate
ndhB gene + 138306 140517 2212 Locate
trnL-CAA gene + 141062 141142 81 Locate
ycf2 gene − 141694 148551 6858 Locate
trnI-CAU gene + 148640 148713 74 Locate
rpl23 gene + 148879 149160 282 Locate
rpl2 gene + 149179 150670 1492 Locate
Status Available
Accession PV192925.1
Length 150,763 bp
GC content 38.6%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 14 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources