Lagochilus lanatonodus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ180381.1 · 2–75 bp · −
psbA · PQ180381.1 · 335–1,393 bp · −
trnK-UUU · PQ180381.1 · 1,633–4,219 bp · −
matK · PQ180381.1 · 1,934–3,469 bp · −
rps16 · PQ180381.1 · 4,944–6,082 bp · −
trnQ-UUG · PQ180381.1 · 7,096–7,167 bp · −
trnS-GGA · PQ180381.1 · 8,298–8,385 bp · −
atpA · PQ180381.1 · 10,134–11,657 bp · −
atpF · PQ180381.1 · 11,746–12,958 bp · −
atpH · PQ180381.1 · 13,318–13,563 bp · −
atpI · PQ180381.1 · 14,524–15,267 bp · −
rps2 · PQ180381.1 · 15,498–16,208 bp · −
rpoC2 · PQ180381.1 · 16,530–20,612 bp · −
rpoC1 · PQ180381.1 · 20,767–23,593 bp · −
rpoB · PQ180381.1 · 23,620–26,838 bp · −
psbM · PQ180381.1 · 29,699–29,803 bp · −
trnD-GUC · PQ180381.1 · 30,341–30,414 bp · −
trnY-GUA · PQ180381.1 · 30,528–30,611 bp · −
trnE-UUC · PQ180381.1 · 30,671–30,743 bp · −
trnT-CGU · PQ180381.1 · 31,313–31,384 bp · −
trnS-UGA · PQ180381.1 · 35,299–35,391 bp · −
trnfM-CAU · PQ180381.1 · 36,355–36,428 bp · −
rps14 · PQ180381.1 · 36,578–36,880 bp · −
psaB · PQ180381.1 · 37,010–39,214 bp · −
psaA · PQ180381.1 · 39,240–41,492 bp · −
ycf3 · PQ180381.1 · 42,072–44,012 bp · −
rps4 · PQ180381.1 · 44,699–45,304 bp · −
trnT-UGU · PQ180381.1 · 45,700–45,772 bp · −
ndhJ · PQ180381.1 · 48,049–48,543 bp · −
ndhK · PQ180381.1 · 48,626–49,303 bp · −
ndhC · PQ180381.1 · 49,357–49,719 bp · −
trnV-UAC · PQ180381.1 · 50,681–51,339 bp · −
atpE · PQ180381.1 · 51,818–52,219 bp · −
atpB · PQ180381.1 · 52,216–53,712 bp · −
psbJ · PQ180381.1 · 63,086–63,208 bp · −
psbL · PQ180381.1 · 63,346–63,462 bp · −
psbF · PQ180381.1 · 63,486–63,605 bp · −
psbE · PQ180381.1 · 63,620–63,871 bp · −
trnW-CCA · PQ180381.1 · 65,329–65,402 bp · −
trnP-UGG · PQ180381.1 · 65,570–65,643 bp · −
rpl20 · PQ180381.1 · 67,398–67,784 bp · −
rps12 · PQ180381.1 · 68,544–68,657 bp · −
rps12 · PQ180381.1 · 95,848–96,641 bp · −
clpP · PQ180381.1 · 68,783–70,646 bp · −
psbN · PQ180381.1 · 72,952–73,083 bp · −
rpoA · PQ180381.1 · 76,510–77,523 bp · −
rps11 · PQ180381.1 · 77,595–78,026 bp · −
rpl36 · PQ180381.1 · 78,114–78,227 bp · −
infA · PQ180381.1 · 78,323–78,556 bp · −
rps8 · PQ180381.1 · 78,679–79,092 bp · −
rpl14 · PQ180381.1 · 79,265–79,633 bp · −
rpl16 · PQ180381.1 · 79,760–81,052 bp · −
rps3 · PQ180381.1 · 81,190–81,852 bp · −
rpl22 · PQ180381.1 · 81,837–82,310 bp · −
rps19 · PQ180381.1 · 82,370–82,648 bp · −
rpl2 · PQ180381.1 · 82,700–84,191 bp · −
rpl23 · PQ180381.1 · 84,210–84,491 bp · −
trnI-CAU · PQ180381.1 · 84,657–84,730 bp · −
trnL-CAA · PQ180381.1 · 92,216–92,296 bp · −
ndhB · PQ180381.1 · 92,841–95,052 bp · −
rps7 · PQ180381.1 · 95,327–95,794 bp · −
trnN-GUU · PQ180381.1 · 106,769–106,840 bp · −
ndhF · PQ180381.1 · 108,224–110,446 bp · −
ndhD · PQ180381.1 · 113,173–114,699 bp · −
psaC · PQ180381.1 · 114,800–115,045 bp · −
ndhE · PQ180381.1 · 115,305–115,610 bp · −
ndhG · PQ180381.1 · 115,826–116,356 bp · −
ndhI · PQ180381.1 · 116,712–117,218 bp · −
ndhA · PQ180381.1 · 117,305–119,459 bp · −
ndhH · PQ180381.1 · 119,461–120,642 bp · −
rps15 · PQ180381.1 · 120,743–121,015 bp · −
ycf1 · PQ180381.1 · 121,447–126,969 bp · −
trnR-ACG · PQ180381.1 · 127,942–128,020 bp · −
rrn5 · PQ180381.1 · 128,250–128,370 bp · −
rrn4.5 · PQ180381.1 · 128,626–128,728 bp · −
rrn23 · PQ180381.1 · 128,827–131,637 bp · −
trnA-UGC · PQ180381.1 · 131,837–132,715 bp · −
trnI-GAU · PQ180381.1 · 132,780–133,795 bp · −
rrn16 · PQ180381.1 · 134,085–135,575 bp · −
trnV-GAC · PQ180381.1 · 135,803–135,874 bp · −
ycf15 · PQ180381.1 · 142,180–142,428 bp · −
ycf2 · PQ180381.1 · 142,468–149,316 bp · −
psbK · PQ180381.1 · 7,504–7,689 bp · +
psbI · PQ180381.1 · 8,065–8,175 bp · +
trnG-UCC · PQ180381.1 · 9,030–9,789 bp · +
trnR-UCU · PQ180381.1 · 9,963–10,037 bp · +
trnC-GCA · PQ180381.1 · 27,926–28,001 bp · +
petN · PQ180381.1 · 28,826–28,915 bp · +
psbD · PQ180381.1 · 32,638–33,699 bp · +
psbC · PQ180381.1 · 33,647–35,068 bp · +
psbZ · PQ180381.1 · 35,718–35,906 bp · +
trnG-GCC · PQ180381.1 · 36,138–36,208 bp · +
trnS-GGA · PQ180381.1 · 44,328–44,414 bp · +
trnL-UAA · PQ180381.1 · 46,448–47,027 bp · +
trnF-GAA · PQ180381.1 · 47,319–47,391 bp · +
trnM-CAU · PQ180381.1 · 51,528–51,600 bp · +
rbcL · PQ180381.1 · 54,515–55,981 bp · +
accD · PQ180381.1 · 56,688–58,154 bp · +
psaI · PQ180381.1 · 58,506–58,616 bp · +
ycf4 · PQ180381.1 · 59,054–59,608 bp · +
cemA · PQ180381.1 · 60,168–60,857 bp · +
petA · PQ180381.1 · 61,074–62,036 bp · +
petL · PQ180381.1 · 64,812–64,907 bp · +
petG · PQ180381.1 · 65,082–65,195 bp · +
psaJ · PQ180381.1 · 65,918–66,052 bp · +
rpl33 · PQ180381.1 · 66,524–66,724 bp · +
rps18 · PQ180381.1 · 66,881–67,186 bp · +
rps12 · PQ180381.1 · 137,494–138,287 bp · +
psbB · PQ180381.1 · 71,067–72,593 bp · +
psbT · PQ180381.1 · 72,784–72,891 bp · +
psbH · PQ180381.1 · 73,187–73,408 bp · +
petB · PQ180381.1 · 73,529–74,913 bp · +
petD · PQ180381.1 · 75,108–76,341 bp · +
ycf2 · PQ180381.1 · 84,819–91,667 bp · +
ycf15 · PQ180381.1 · 91,707–91,955 bp · +
trnV-GAC · PQ180381.1 · 98,261–98,332 bp · +
rrn16 · PQ180381.1 · 98,560–100,050 bp · +
trnI-GAU · PQ180381.1 · 100,340–101,355 bp · +
trnA-UGC · PQ180381.1 · 101,420–102,298 bp · +
rrn23 · PQ180381.1 · 102,498–105,308 bp · +
rrn4.5 · PQ180381.1 · 105,407–105,509 bp · +
rrn5 · PQ180381.1 · 105,765–105,885 bp · +
trnR-ACG · PQ180381.1 · 106,115–106,193 bp · +
rpl32 · PQ180381.1 · 110,951–111,127 bp · +
trnL-UAG · PQ180381.1 · 111,848–111,927 bp · +
ccsA · PQ180381.1 · 112,031–113,002 bp · +
trnN-GUU · PQ180381.1 · 127,295–127,366 bp · +
rps7 · PQ180381.1 · 138,341–138,808 bp · +
ndhB · PQ180381.1 · 139,083–141,294 bp · +
trnL-CAA · PQ180381.1 · 141,839–141,919 bp · +
trnI-CAU · PQ180381.1 · 149,405–149,478 bp · +
rpl23 · PQ180381.1 · 149,644–149,925 bp · +
rpl2 · PQ180381.1 · 149,944–151,435 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lagochilus lanatonodus
ANNOTATED PLASTOME
PQ180381.1
151,528 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37882 75764 113646 151528 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GGA atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnT-CGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 335 1393 1059 Locate
trnK-UUU gene − 1633 4219 2587 Locate
matK gene − 1934 3469 1536 Locate
rps16 gene − 4944 6082 1139 Locate
trnQ-UUG gene − 7096 7167 72 Locate
psbK gene + 7504 7689 186 Locate
psbI gene + 8065 8175 111 Locate
trnS-GGA gene − 8298 8385 88 Locate
trnG-UCC gene + 9030 9789 760 Locate
trnR-UCU gene + 9963 10037 75 Locate
atpA gene − 10134 11657 1524 Locate
atpF gene − 11746 12958 1213 Locate
atpH gene − 13318 13563 246 Locate
atpI gene − 14524 15267 744 Locate
rps2 gene − 15498 16208 711 Locate
rpoC2 gene − 16530 20612 4083 Locate
rpoC1 gene − 20767 23593 2827 Locate
rpoB gene − 23620 26838 3219 Locate
trnC-GCA gene + 27926 28001 76 Locate
petN gene + 28826 28915 90 Locate
psbM gene − 29699 29803 105 Locate
trnD-GUC gene − 30341 30414 74 Locate
trnY-GUA gene − 30528 30611 84 Locate
trnE-UUC gene − 30671 30743 73 Locate
trnT-CGU gene − 31313 31384 72 Locate
psbD gene + 32638 33699 1062 Locate
psbC gene + 33647 35068 1422 Locate
trnS-UGA gene − 35299 35391 93 Locate
psbZ gene + 35718 35906 189 Locate
trnG-GCC gene + 36138 36208 71 Locate
trnfM-CAU gene − 36355 36428 74 Locate
rps14 gene − 36578 36880 303 Locate
psaB gene − 37010 39214 2205 Locate
psaA gene − 39240 41492 2253 Locate
ycf3 gene − 42072 44012 1941 Locate
trnS-GGA gene + 44328 44414 87 Locate
rps4 gene − 44699 45304 606 Locate
trnT-UGU gene − 45700 45772 73 Locate
trnL-UAA gene + 46448 47027 580 Locate
trnF-GAA gene + 47319 47391 73 Locate
ndhJ gene − 48049 48543 495 Locate
ndhK gene − 48626 49303 678 Locate
ndhC gene − 49357 49719 363 Locate
trnV-UAC gene − 50681 51339 659 Locate
trnM-CAU gene + 51528 51600 73 Locate
atpE gene − 51818 52219 402 Locate
atpB gene − 52216 53712 1497 Locate
rbcL gene + 54515 55981 1467 Locate
accD gene + 56688 58154 1467 Locate
psaI gene + 58506 58616 111 Locate
ycf4 gene + 59054 59608 555 Locate
cemA gene + 60168 60857 690 Locate
petA gene + 61074 62036 963 Locate
psbJ gene − 63086 63208 123 Locate
psbL gene − 63346 63462 117 Locate
psbF gene − 63486 63605 120 Locate
psbE gene − 63620 63871 252 Locate
petL gene + 64812 64907 96 Locate
petG gene + 65082 65195 114 Locate
trnW-CCA gene − 65329 65402 74 Locate
trnP-UGG gene − 65570 65643 74 Locate
psaJ gene + 65918 66052 135 Locate
rpl33 gene + 66524 66724 201 Locate
rps18 gene + 66881 67186 306 Locate
rpl20 gene − 67398 67784 387 Locate
rps12 gene − 68544 68657 114 Locate
clpP gene − 68783 70646 1864 Locate
psbB gene + 71067 72593 1527 Locate
psbT gene + 72784 72891 108 Locate
psbN gene − 72952 73083 132 Locate
psbH gene + 73187 73408 222 Locate
petB gene + 73529 74913 1385 Locate
petD gene + 75108 76341 1234 Locate
rpoA gene − 76510 77523 1014 Locate
rps11 gene − 77595 78026 432 Locate
rpl36 gene − 78114 78227 114 Locate
infA gene − 78323 78556 234 Locate
rps8 gene − 78679 79092 414 Locate
rpl14 gene − 79265 79633 369 Locate
rpl16 gene − 79760 81052 1293 Locate
rps3 gene − 81190 81852 663 Locate
rpl22 gene − 81837 82310 474 Locate
rps19 gene − 82370 82648 279 Locate
rpl2 gene − 82700 84191 1492 Locate
rpl23 gene − 84210 84491 282 Locate
trnI-CAU gene − 84657 84730 74 Locate
ycf2 gene + 84819 91667 6849 Locate
ycf15 gene + 91707 91955 249 Locate
trnL-CAA gene − 92216 92296 81 Locate
ndhB gene − 92841 95052 2212 Locate
rps7 gene − 95327 95794 468 Locate
rps12 gene − 95848 96641 794 Locate
trnV-GAC gene + 98261 98332 72 Locate
rrn16 gene + 98560 100050 1491 Locate
trnI-GAU gene + 100340 101355 1016 Locate
trnA-UGC gene + 101420 102298 879 Locate
rrn23 gene + 102498 105308 2811 Locate
rrn4.5 gene + 105407 105509 103 Locate
rrn5 gene + 105765 105885 121 Locate
trnR-ACG gene + 106115 106193 79 Locate
trnN-GUU gene − 106769 106840 72 Locate
ndhF gene − 108224 110446 2223 Locate
rpl32 gene + 110951 111127 177 Locate
trnL-UAG gene + 111848 111927 80 Locate
ccsA gene + 112031 113002 972 Locate
ndhD gene − 113173 114699 1527 Locate
psaC gene − 114800 115045 246 Locate
ndhE gene − 115305 115610 306 Locate
ndhG gene − 115826 116356 531 Locate
ndhI gene − 116712 117218 507 Locate
ndhA gene − 117305 119459 2155 Locate
ndhH gene − 119461 120642 1182 Locate
rps15 gene − 120743 121015 273 Locate
ycf1 gene − 121447 126969 5523 Locate
trnN-GUU gene + 127295 127366 72 Locate
trnR-ACG gene − 127942 128020 79 Locate
rrn5 gene − 128250 128370 121 Locate
rrn4.5 gene − 128626 128728 103 Locate
rrn23 gene − 128827 131637 2811 Locate
trnA-UGC gene − 131837 132715 879 Locate
trnI-GAU gene − 132780 133795 1016 Locate
rrn16 gene − 134085 135575 1491 Locate
trnV-GAC gene − 135803 135874 72 Locate
rps12 gene + 137494 138287 794 Locate
rps7 gene + 138341 138808 468 Locate
ndhB gene + 139083 141294 2212 Locate
trnL-CAA gene + 141839 141919 81 Locate
ycf15 gene − 142180 142428 249 Locate
ycf2 gene − 142468 149316 6849 Locate
trnI-CAU gene + 149405 149478 74 Locate
rpl23 gene + 149644 149925 282 Locate
rpl2 gene + 149944 151435 1492 Locate
Status Available
Accession PQ180381.1
Length 151,528 bp
GC content 38.6%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources