Coordinate-aware organelle record

Lagopsis flava chloroplast genome

Available PQ231086.1 151,774 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	299	1358	1059
trnK-UUU	gene	translation-rna	−	1590	4178	2588
matK	gene	other	−	1892	3428	1536
rps16	gene	ribosomal-protein	−	5091	6235	1144
trnQ-UUG	gene	translation-rna	−	6911	6983	72
psbK	gene	photosystem-ii	+	7319	7505	186
psbI	gene	photosystem-ii	+	7888	7999	111
trnS-GGA	gene	translation-rna	−	8128	8216	88
trnG-UCC	gene	translation-rna	+	8899	9664	765
trnR-UCU	gene	translation-rna	+	9837	9912	75
atpA	gene	atp-synthase	−	10008	11532	1524
atpF	gene	atp-synthase	−	11619	12829	1210
atpH	gene	atp-synthase	−	13203	13449	246
atpI	gene	atp-synthase	−	14383	15127	744
rps2	gene	ribosomal-protein	−	15357	16068	711
rpoC2	gene	rna-polymerase	−	16287	20478	4191
rpoC1	gene	rna-polymerase	−	20632	23465	2833
rpoB	gene	rna-polymerase	−	23491	26704	3213
trnC-GCA	gene	translation-rna	+	27799	27875	76
petN	gene	cytochrome	+	28694	28784	90
psbM	gene	photosystem-ii	−	29573	29678	105
trnD-GUC	gene	translation-rna	−	30207	30281	74
trnY-GUA	gene	translation-rna	−	30395	30479	84
trnE-UUC	gene	translation-rna	−	30538	30611	73
trnT-CGU	gene	translation-rna	−	31182	31254	72
psbD	gene	photosystem-ii	+	32408	33470	1062
psbC	gene	photosystem-ii	+	33417	34839	1422
trnS-UGA	gene	translation-rna	−	35070	35163	93
psbZ	gene	photosystem-ii	+	35489	35678	189
trnG-GCC	gene	translation-rna	+	35905	35976	71
trnfM-CAU	gene	translation-rna	−	36124	36198	74
rps14	gene	ribosomal-protein	−	36347	36650	303
psaB	gene	photosystem-i	−	36777	38982	2205
psaA	gene	photosystem-i	−	39007	41260	2253
ycf3	gene	other	−	41989	43924	1935
trnS-GGA	gene	translation-rna	+	44251	44338	87
rps4	gene	ribosomal-protein	−	44624	45230	606
trnT-UGU	gene	translation-rna	−	45615	45688	73
trnL-UAA	gene	translation-rna	+	46366	46940	574
trnF-GAA	gene	translation-rna	+	47231	47304	73
ndhJ	gene	nad-dehydrogenase	−	47974	48469	495
ndhK	gene	nad-dehydrogenase	−	48551	49229	678
ndhC	gene	nad-dehydrogenase	−	49281	49644	363
trnV-UAC	gene	translation-rna	−	50606	51258	652
trnM-CAU	gene	translation-rna	+	51446	51519	73
atpE	gene	atp-synthase	−	51736	52138	402
atpB	gene	atp-synthase	−	52134	53631	1497
rbcL	gene	other	+	54418	55885	1467
accD	gene	other	+	56574	58041	1467
psaI	gene	photosystem-i	+	58738	58849	111
ycf4	gene	other	+	59287	59842	555
cemA	gene	other	+	60402	61092	690
petA	gene	cytochrome	+	61308	62271	963
psbJ	gene	photosystem-ii	−	63329	63452	123
psbL	gene	photosystem-ii	−	63589	63706	117
psbF	gene	photosystem-ii	−	63729	63849	120
psbE	gene	photosystem-ii	−	63863	64115	252
petL	gene	cytochrome	+	65037	65133	96
petG	gene	cytochrome	+	65308	65422	114
trnW-CCA	gene	translation-rna	−	65547	65621	74
trnP-UGG	gene	translation-rna	−	65772	65846	74
psaJ	gene	photosystem-i	+	66120	66255	135
rpl33	gene	ribosomal-protein	+	66720	66921	201
rps18	gene	ribosomal-protein	+	67068	67374	306
rpl20	gene	ribosomal-protein	−	67589	67976	387
rps12	gene	ribosomal-protein	−	68743	96915	28172
rps12	gene	ribosomal-protein	+	68743	138522	69779
clpP	gene	other	−	68990	70862	1872
psbB	gene	photosystem-ii	+	71293	72820	1527
psbT	gene	photosystem-ii	+	73011	73119	108
psbN	gene	photosystem-ii	−	73179	73311	132
psbH	gene	photosystem-ii	+	73414	73636	222
petB	gene	cytochrome	+	73760	75144	1384
petD	gene	cytochrome	+	75358	76583	1225
rpoA	gene	rna-polymerase	−	76751	77771	1020
rps11	gene	ribosomal-protein	−	77842	78274	432
rpl36	gene	ribosomal-protein	−	78361	78475	114
infA	gene	other	−	78570	78810	240
rps8	gene	ribosomal-protein	−	78933	79347	414
rpl14	gene	ribosomal-protein	−	79528	79897	369
rpl16	gene	ribosomal-protein	−	80023	81315	1292
rps3	gene	ribosomal-protein	−	81461	82124	663
rpl22	gene	ribosomal-protein	−	82108	82573	465
rps19	gene	ribosomal-protein	−	82632	82911	279
rpl2	gene	ribosomal-protein	−	82962	84453	1491
rpl23	gene	ribosomal-protein	−	84471	84753	282
trnI-CAU	gene	translation-rna	−	84918	84992	74
ycf2	gene	other	+	85080	91938	6858
ycf15	gene	other	+	91980	92229	249
trnL-CAA	gene	translation-rna	−	92489	92570	81
ndhB	gene	nad-dehydrogenase	−	93114	95326	2212
rps7	gene	ribosomal-protein	−	95600	96068	468
trnV-GAC	gene	translation-rna	+	98531	98603	72
rrn16	gene	ribosomal-rna	+	98830	100321	1491
trnI-GAU	gene	translation-rna	+	100610	101619	1009
trnA-UGC	gene	translation-rna	+	101683	102568	885
rrn23	gene	ribosomal-rna	+	102759	105570	2811
rrn4.5	gene	ribosomal-rna	+	105668	105771	103
rrn5	gene	ribosomal-rna	+	106026	106147	121
trnR-ACG	gene	translation-rna	+	106376	106455	79
trnN-GUU	gene	translation-rna	−	107027	107099	72
ndhF	gene	nad-dehydrogenase	−	108488	110717	2229
rpl32	gene	ribosomal-protein	+	111241	111418	177
trnL-UAG	gene	translation-rna	+	112141	112221	80
ccsA	gene	other	+	112321	113284	963
ndhD	gene	nad-dehydrogenase	−	113468	114989	1521
psaC	gene	photosystem-i	−	115089	115335	246
ndhE	gene	nad-dehydrogenase	−	115600	115906	306
ndhG	gene	nad-dehydrogenase	−	116113	116644	531
ndhI	gene	nad-dehydrogenase	−	117017	117524	507
ndhA	gene	nad-dehydrogenase	−	117610	119784	2174
ndhH	gene	nad-dehydrogenase	−	119785	120967	1182
rps15	gene	ribosomal-protein	−	121067	121340	273
ycf1	gene	other	−	121726	127219	5493
trnN-GUU	gene	translation-rna	+	127544	127616	72
trnR-ACG	gene	translation-rna	−	128188	128267	79
rrn5	gene	ribosomal-rna	−	128496	128617	121
rrn4.5	gene	ribosomal-rna	−	128872	128975	103
rrn23	gene	ribosomal-rna	−	129073	131884	2811
trnA-UGC	gene	translation-rna	−	132075	132960	885
trnI-GAU	gene	translation-rna	−	133024	134033	1009
rrn16	gene	ribosomal-rna	−	134322	135813	1491
trnV-GAC	gene	translation-rna	−	136040	136112	72
rps7	gene	ribosomal-protein	+	138575	139043	468
ndhB	gene	nad-dehydrogenase	+	139317	141529	2212
trnL-CAA	gene	translation-rna	+	142073	142154	81
ycf15	gene	other	−	142414	142663	249
ycf2	gene	other	−	142705	149563	6858
trnI-CAU	gene	translation-rna	+	149651	149725	74
rpl23	gene	ribosomal-protein	+	149890	150172	282
rpl2	gene	ribosomal-protein	+	150190	151681	1491

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ231086.1DNA · accDPQ231086DNA · atpBPQ231086DNA · matKPQ231086DNA · ndhFPQ231086DNA · psbAPQ231086DNA · rbcLPQ231086DNA · rps12PQ231086DNA · ycf1PQ231086