Lamiaceae sp MQ-2024a chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ414921.1 · 9–82 bp · −
psbA · PQ414921.1 · 322–1,380 bp · −
trnK-UUU · PQ414921.1 · 1,615–4,200 bp · −
matK · PQ414921.1 · 1,915–3,450 bp · −
rps16 · PQ414921.1 · 5,138–6,283 bp · −
trnQ-UUG · PQ414921.1 · 7,272–7,343 bp · −
atpA · PQ414921.1 · 10,327–11,850 bp · −
atpF · PQ414921.1 · 11,957–13,169 bp · −
atpH · PQ414921.1 · 13,543–13,788 bp · −
atpI · PQ414921.1 · 14,247–14,990 bp · −
rps2 · PQ414921.1 · 15,202–15,912 bp · −
rpoC2 · PQ414921.1 · 16,135–20,313 bp · −
rpoC1 · PQ414921.1 · 20,448–23,290 bp · −
rpoB · PQ414921.1 · 23,317–26,529 bp · −
psbM · PQ414921.1 · 29,395–29,499 bp · −
trnD-GUC · PQ414921.1 · 30,020–30,093 bp · −
trnY-GUA · PQ414921.1 · 30,209–30,292 bp · −
trnE-UUC · PQ414921.1 · 30,352–30,424 bp · −
trnT-CGU · PQ414921.1 · 30,957–31,028 bp · −
trnS-UGA · PQ414921.1 · 34,926–35,018 bp · −
trnfM-CAU · PQ414921.1 · 35,979–36,052 bp · −
rps14 · PQ414921.1 · 36,202–36,504 bp · −
psaB · PQ414921.1 · 36,632–38,836 bp · −
psaA · PQ414921.1 · 38,862–41,114 bp · −
ycf3 · PQ414921.1 · 41,798–43,748 bp · −
rps4 · PQ414921.1 · 44,439–45,044 bp · −
trnT-UGU · PQ414921.1 · 45,438–45,510 bp · −
ndhJ · PQ414921.1 · 47,803–48,297 bp · −
ndhK · PQ414921.1 · 48,380–49,057 bp · −
ndhC · PQ414921.1 · 49,111–49,473 bp · −
trnV-UAC · PQ414921.1 · 50,324–50,971 bp · −
atpE · PQ414921.1 · 51,445–51,846 bp · −
atpB · PQ414921.1 · 51,843–53,339 bp · −
psbJ · PQ414921.1 · 62,997–63,119 bp · −
psbL · PQ414921.1 · 63,257–63,373 bp · −
psbF · PQ414921.1 · 63,397–63,516 bp · −
psbE · PQ414921.1 · 63,531–63,782 bp · −
trnW-CCA · PQ414921.1 · 65,233–65,306 bp · −
trnP-UGG · PQ414921.1 · 65,493–65,566 bp · −
rpl20 · PQ414921.1 · 67,287–67,694 bp · −
rps12 · PQ414921.1 · 68,454–68,567 bp · −
rps12 · PQ414921.1 · 95,760–96,553 bp · −
clpP · PQ414921.1 · 68,694–70,571 bp · −
psbN · PQ414921.1 · 72,896–73,027 bp · −
rpoA · PQ414921.1 · 76,429–77,442 bp · −
rps11 · PQ414921.1 · 77,514–77,945 bp · −
rpl36 · PQ414921.1 · 78,033–78,146 bp · −
infA · PQ414921.1 · 78,242–78,475 bp · −
rps8 · PQ414921.1 · 78,597–79,010 bp · −
rpl14 · PQ414921.1 · 79,185–79,553 bp · −
rpl16 · PQ414921.1 · 79,680–80,972 bp · −
rps3 · PQ414921.1 · 81,123–81,785 bp · −
rpl22 · PQ414921.1 · 81,770–82,234 bp · −
rps19 · PQ414921.1 · 82,294–82,563 bp · −
rpl23 · PQ414921.1 · 84,125–84,406 bp · −
trnI-CAU · PQ414921.1 · 84,572–84,645 bp · −
trnL-CAA · PQ414921.1 · 92,128–92,208 bp · −
ndhB · PQ414921.1 · 92,753–94,964 bp · −
rps7 · PQ414921.1 · 95,239–95,706 bp · −
trnN-GUU · PQ414921.1 · 106,639–106,710 bp · −
ndhF · PQ414921.1 · 108,095–110,317 bp · −
ndhD · PQ414921.1 · 113,070–114,590 bp · −
psaC · PQ414921.1 · 114,690–114,935 bp · −
ndhE · PQ414921.1 · 115,198–115,503 bp · −
ndhG · PQ414921.1 · 115,719–116,249 bp · −
ndhI · PQ414921.1 · 116,607–117,113 bp · −
ndhA · PQ414921.1 · 117,200–119,361 bp · −
ndhH · PQ414921.1 · 119,363–120,544 bp · −
rps15 · PQ414921.1 · 120,645–120,917 bp · −
ycf1 · PQ414921.1 · 121,297–126,816 bp · −
trnR-ACG · PQ414921.1 · 127,789–127,867 bp · −
rrn5 · PQ414921.1 · 128,102–128,222 bp · −
rrn4.5 · PQ414921.1 · 128,447–128,549 bp · −
rrn23 · PQ414921.1 · 128,648–131,458 bp · −
trnA-UGC · PQ414921.1 · 131,656–132,534 bp · −
trnI-GAU · PQ414921.1 · 132,599–133,607 bp · −
rrn16 · PQ414921.1 · 133,897–135,387 bp · −
trnV-GAC · PQ414921.1 · 135,615–135,686 bp · −
ycf15 · PQ414921.1 · 141,980–142,228 bp · −
ycf2 · PQ414921.1 · 142,271–149,113 bp · −
psbK · PQ414921.1 · 7,680–7,865 bp · +
psbI · PQ414921.1 · 8,243–8,353 bp · +
trnG-UCC · PQ414921.1 · 9,234–9,983 bp · +
trnR-UCU · PQ414921.1 · 10,156–10,230 bp · +
trnC-GCA · PQ414921.1 · 27,611–27,686 bp · +
petN · PQ414921.1 · 28,519–28,608 bp · +
psbD · PQ414921.1 · 32,276–33,337 bp · +
psbC · PQ414921.1 · 33,285–34,706 bp · +
psbZ · PQ414921.1 · 35,346–35,534 bp · +
trnG-GCC · PQ414921.1 · 35,758–35,828 bp · +
trnS-GGA · PQ414921.1 · 44,065–44,151 bp · +
trnL-UAA · PQ414921.1 · 46,192–46,765 bp · +
trnF-GAA · PQ414921.1 · 47,063–47,135 bp · +
trnM-CAU · PQ414921.1 · 51,155–51,227 bp · +
rbcL · PQ414921.1 · 54,124–55,590 bp · +
accD · PQ414921.1 · 56,271–57,737 bp · +
psaI · PQ414921.1 · 58,422–58,532 bp · +
ycf4 · PQ414921.1 · 58,972–59,526 bp · +
cemA · PQ414921.1 · 60,079–60,768 bp · +
petA · PQ414921.1 · 60,985–61,947 bp · +
petL · PQ414921.1 · 64,712–64,807 bp · +
petG · PQ414921.1 · 64,983–65,096 bp · +
psaJ · PQ414921.1 · 65,841–65,975 bp · +
rpl33 · PQ414921.1 · 66,438–66,638 bp · +
rps18 · PQ414921.1 · 66,785–67,090 bp · +
rps12 · PQ414921.1 · 137,294–138,087 bp · +
psbB · PQ414921.1 · 71,009–72,535 bp · +
psbT · PQ414921.1 · 72,728–72,835 bp · +
psbH · PQ414921.1 · 73,131–73,352 bp · +
petB · PQ414921.1 · 73,477–74,852 bp · +
petD · PQ414921.1 · 75,047–76,266 bp · +
ycf2 · PQ414921.1 · 84,734–91,576 bp · +
ycf15 · PQ414921.1 · 91,619–91,867 bp · +
trnV-GAC · PQ414921.1 · 98,161–98,232 bp · +
rrn16 · PQ414921.1 · 98,460–99,950 bp · +
trnI-GAU · PQ414921.1 · 100,240–101,248 bp · +
trnA-UGC · PQ414921.1 · 101,313–102,191 bp · +
rrn23 · PQ414921.1 · 102,389–105,199 bp · +
rrn4.5 · PQ414921.1 · 105,298–105,400 bp · +
rrn5 · PQ414921.1 · 105,625–105,745 bp · +
trnR-ACG · PQ414921.1 · 105,980–106,058 bp · +
rpl32 · PQ414921.1 · 110,826–111,002 bp · +
trnL-UAG · PQ414921.1 · 111,726–111,805 bp · +
ccsA · PQ414921.1 · 111,917–112,888 bp · +
trnN-GUU · PQ414921.1 · 127,137–127,208 bp · +
rps7 · PQ414921.1 · 138,141–138,608 bp · +
ndhB · PQ414921.1 · 138,883–141,094 bp · +
trnL-CAA · PQ414921.1 · 141,639–141,719 bp · +
trnI-CAU · PQ414921.1 · 149,202–149,275 bp · +
rpl23 · PQ414921.1 · 149,441–149,722 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lamiaceae sp MQ-2024a
ANNOTATED PLASTOME
PQ414921.1
151,263 bp · 129 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37816 75632 113447 151263 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnT-CGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
130 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 82 74 Locate
psbA gene − 322 1380 1059 Locate
trnK-UUU gene − 1615 4200 2586 Locate
matK gene − 1915 3450 1536 Locate
rps16 gene − 5138 6283 1146 Locate
trnQ-UUG gene − 7272 7343 72 Locate
psbK gene + 7680 7865 186 Locate
psbI gene + 8243 8353 111 Locate
trnG-UCC gene + 9234 9983 750 Locate
trnR-UCU gene + 10156 10230 75 Locate
atpA gene − 10327 11850 1524 Locate
atpF gene − 11957 13169 1213 Locate
atpH gene − 13543 13788 246 Locate
atpI gene − 14247 14990 744 Locate
rps2 gene − 15202 15912 711 Locate
rpoC2 gene − 16135 20313 4179 Locate
rpoC1 gene − 20448 23290 2843 Locate
rpoB gene − 23317 26529 3213 Locate
trnC-GCA gene + 27611 27686 76 Locate
petN gene + 28519 28608 90 Locate
psbM gene − 29395 29499 105 Locate
trnD-GUC gene − 30020 30093 74 Locate
trnY-GUA gene − 30209 30292 84 Locate
trnE-UUC gene − 30352 30424 73 Locate
trnT-CGU gene − 30957 31028 72 Locate
psbD gene + 32276 33337 1062 Locate
psbC gene + 33285 34706 1422 Locate
trnS-UGA gene − 34926 35018 93 Locate
psbZ gene + 35346 35534 189 Locate
trnG-GCC gene + 35758 35828 71 Locate
trnfM-CAU gene − 35979 36052 74 Locate
rps14 gene − 36202 36504 303 Locate
psaB gene − 36632 38836 2205 Locate
psaA gene − 38862 41114 2253 Locate
ycf3 gene − 41798 43748 1951 Locate
trnS-GGA gene + 44065 44151 87 Locate
rps4 gene − 44439 45044 606 Locate
trnT-UGU gene − 45438 45510 73 Locate
trnL-UAA gene + 46192 46765 574 Locate
trnF-GAA gene + 47063 47135 73 Locate
ndhJ gene − 47803 48297 495 Locate
ndhK gene − 48380 49057 678 Locate
ndhC gene − 49111 49473 363 Locate
trnV-UAC gene − 50324 50971 648 Locate
trnM-CAU gene + 51155 51227 73 Locate
atpE gene − 51445 51846 402 Locate
atpB gene − 51843 53339 1497 Locate
rbcL gene + 54124 55590 1467 Locate
accD gene + 56271 57737 1467 Locate
psaI gene + 58422 58532 111 Locate
ycf4 gene + 58972 59526 555 Locate
cemA gene + 60079 60768 690 Locate
petA gene + 60985 61947 963 Locate
psbJ gene − 62997 63119 123 Locate
psbL gene − 63257 63373 117 Locate
psbF gene − 63397 63516 120 Locate
psbE gene − 63531 63782 252 Locate
petL gene + 64712 64807 96 Locate
petG gene + 64983 65096 114 Locate
trnW-CCA gene − 65233 65306 74 Locate
trnP-UGG gene − 65493 65566 74 Locate
psaJ gene + 65841 65975 135 Locate
rpl33 gene + 66438 66638 201 Locate
rps18 gene + 66785 67090 306 Locate
rpl20 gene − 67287 67694 408 Locate
rps12 gene − 68454 68567 114 Locate
clpP gene − 68694 70571 1878 Locate
psbB gene + 71009 72535 1527 Locate
psbT gene + 72728 72835 108 Locate
psbN gene − 72896 73027 132 Locate
psbH gene + 73131 73352 222 Locate
petB gene + 73477 74852 1376 Locate
petD gene + 75047 76266 1220 Locate
rpoA gene − 76429 77442 1014 Locate
rps11 gene − 77514 77945 432 Locate
rpl36 gene − 78033 78146 114 Locate
infA gene − 78242 78475 234 Locate
rps8 gene − 78597 79010 414 Locate
rpl14 gene − 79185 79553 369 Locate
rpl16 gene − 79680 80972 1293 Locate
rps3 gene − 81123 81785 663 Locate
rpl22 gene − 81770 82234 465 Locate
rps19 gene − 82294 82563 270 Locate
rpl23 gene − 84125 84406 282 Locate
trnI-CAU gene − 84572 84645 74 Locate
ycf2 gene + 84734 91576 6843 Locate
ycf15 gene + 91619 91867 249 Locate
trnL-CAA gene − 92128 92208 81 Locate
ndhB gene − 92753 94964 2212 Locate
rps7 gene − 95239 95706 468 Locate
rps12 gene − 95760 96553 794 Locate
trnV-GAC gene + 98161 98232 72 Locate
rrn16 gene + 98460 99950 1491 Locate
trnI-GAU gene + 100240 101248 1009 Locate
trnA-UGC gene + 101313 102191 879 Locate
rrn23 gene + 102389 105199 2811 Locate
rrn4.5 gene + 105298 105400 103 Locate
rrn5 gene + 105625 105745 121 Locate
trnR-ACG gene + 105980 106058 79 Locate
trnN-GUU gene − 106639 106710 72 Locate
ndhF gene − 108095 110317 2223 Locate
rpl32 gene + 110826 111002 177 Locate
trnL-UAG gene + 111726 111805 80 Locate
ccsA gene + 111917 112888 972 Locate
ndhD gene − 113070 114590 1521 Locate
psaC gene − 114690 114935 246 Locate
ndhE gene − 115198 115503 306 Locate
ndhG gene − 115719 116249 531 Locate
ndhI gene − 116607 117113 507 Locate
ndhA gene − 117200 119361 2162 Locate
ndhH gene − 119363 120544 1182 Locate
rps15 gene − 120645 120917 273 Locate
ycf1 gene − 121297 126816 5520 Locate
trnN-GUU gene + 127137 127208 72 Locate
trnR-ACG gene − 127789 127867 79 Locate
rrn5 gene − 128102 128222 121 Locate
rrn4.5 gene − 128447 128549 103 Locate
rrn23 gene − 128648 131458 2811 Locate
trnA-UGC gene − 131656 132534 879 Locate
trnI-GAU gene − 132599 133607 1009 Locate
rrn16 gene − 133897 135387 1491 Locate
trnV-GAC gene − 135615 135686 72 Locate
rps12 gene + 137294 138087 794 Locate
rps7 gene + 138141 138608 468 Locate
ndhB gene + 138883 141094 2212 Locate
trnL-CAA gene + 141639 141719 81 Locate
ycf15 gene − 141980 142228 249 Locate
ycf2 gene − 142271 149113 6843 Locate
trnI-CAU gene + 149202 149275 74 Locate
rpl23 gene + 149441 149722 282 Locate
Status Available
Accession PQ414921.1
Length 151,263 bp
GC content 38.5%
Annotated genes 129
Gene sequence records 0
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 24 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources