Coordinate-aware organelle record

Lamiaceae sp MQ-2024a chloroplast genome

Available PQ414921.1 151,263 bp 129 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 9-82 bp · − strandpsbA · gene · 322-1,380 bp · − strandtrnK-UUU · gene · 1,615-4,200 bp · − strandmatK · gene · 1,915-3,450 bp · − strandrps16 · gene · 5,138-6,283 bp · − strandtrnQ-UUG · gene · 7,272-7,343 bp · − strandpsbK · gene · 7,680-7,865 bp · + strandpsbI · gene · 8,243-8,353 bp · + strandtrnG-UCC · gene · 9,234-9,983 bp · + strandtrnR-UCU · gene · 10,156-10,230 bp · + strandatpA · gene · 10,327-11,850 bp · − strandatpF · gene · 11,957-13,169 bp · − strandatpH · gene · 13,543-13,788 bp · − strandatpI · gene · 14,247-14,990 bp · − strandrps2 · gene · 15,202-15,912 bp · − strandrpoC2 · gene · 16,135-20,313 bp · − strandrpoC1 · gene · 20,448-23,290 bp · − strandrpoB · gene · 23,317-26,529 bp · − strandtrnC-GCA · gene · 27,611-27,686 bp · + strandpetN · gene · 28,519-28,608 bp · + strandpsbM · gene · 29,395-29,499 bp · − strandtrnD-GUC · gene · 30,020-30,093 bp · − strandtrnY-GUA · gene · 30,209-30,292 bp · − strandtrnE-UUC · gene · 30,352-30,424 bp · − strandtrnT-CGU · gene · 30,957-31,028 bp · − strandpsbD · gene · 32,276-33,337 bp · + strandpsbC · gene · 33,285-34,706 bp · + strandtrnS-UGA · gene · 34,926-35,018 bp · − strandpsbZ · gene · 35,346-35,534 bp · + strandtrnG-GCC · gene · 35,758-35,828 bp · + strandtrnfM-CAU · gene · 35,979-36,052 bp · − strandrps14 · gene · 36,202-36,504 bp · − strandpsaB · gene · 36,632-38,836 bp · − strandpsaA · gene · 38,862-41,114 bp · − strandycf3 · gene · 41,798-43,748 bp · − strandtrnS-GGA · gene · 44,065-44,151 bp · + strandrps4 · gene · 44,439-45,044 bp · − strandtrnT-UGU · gene · 45,438-45,510 bp · − strandtrnL-UAA · gene · 46,192-46,765 bp · + strandtrnF-GAA · gene · 47,063-47,135 bp · + strandndhJ · gene · 47,803-48,297 bp · − strandndhK · gene · 48,380-49,057 bp · − strandndhC · gene · 49,111-49,473 bp · − strandtrnV-UAC · gene · 50,324-50,971 bp · − strandtrnM-CAU · gene · 51,155-51,227 bp · + strandatpE · gene · 51,445-51,846 bp · − strandatpB · gene · 51,843-53,339 bp · − strandrbcL · gene · 54,124-55,590 bp · + strandaccD · gene · 56,271-57,737 bp · + strandpsaI · gene · 58,422-58,532 bp · + strandycf4 · gene · 58,972-59,526 bp · + strandcemA · gene · 60,079-60,768 bp · + strandpetA · gene · 60,985-61,947 bp · + strandpsbJ · gene · 62,997-63,119 bp · − strandpsbL · gene · 63,257-63,373 bp · − strandpsbF · gene · 63,397-63,516 bp · − strandpsbE · gene · 63,531-63,782 bp · − strandpetL · gene · 64,712-64,807 bp · + strandpetG · gene · 64,983-65,096 bp · + strandtrnW-CCA · gene · 65,233-65,306 bp · − strandtrnP-UGG · gene · 65,493-65,566 bp · − strandpsaJ · gene · 65,841-65,975 bp · + strandrpl33 · gene · 66,438-66,638 bp · + strandrps18 · gene · 66,785-67,090 bp · + strandrpl20 · gene · 67,287-67,694 bp · − strandrps12 · gene · 68,454-96,553 bp · − strandrps12 · gene · 68,454-138,087 bp · + strandclpP · gene · 68,694-70,571 bp · − strandpsbB · gene · 71,009-72,535 bp · + strandpsbT · gene · 72,728-72,835 bp · + strandpsbN · gene · 72,896-73,027 bp · − strandpsbH · gene · 73,131-73,352 bp · + strandpetB · gene · 73,477-74,852 bp · + strandpetD · gene · 75,047-76,266 bp · + strandrpoA · gene · 76,429-77,442 bp · − strandrps11 · gene · 77,514-77,945 bp · − strandrpl36 · gene · 78,033-78,146 bp · − strandinfA · gene · 78,242-78,475 bp · − strandrps8 · gene · 78,597-79,010 bp · − strandrpl14 · gene · 79,185-79,553 bp · − strandrpl16 · gene · 79,680-80,972 bp · − strandrps3 · gene · 81,123-81,785 bp · − strandrpl22 · gene · 81,770-82,234 bp · − strandrps19 · gene · 82,294-82,563 bp · − strandrpl23 · gene · 84,125-84,406 bp · − strandtrnI-CAU · gene · 84,572-84,645 bp · − strandycf2 · gene · 84,734-91,576 bp · + strandycf15 · gene · 91,619-91,867 bp · + strandtrnL-CAA · gene · 92,128-92,208 bp · − strandndhB · gene · 92,753-94,964 bp · − strandrps7 · gene · 95,239-95,706 bp · − strandtrnV-GAC · gene · 98,161-98,232 bp · + strandrrn16 · gene · 98,460-99,950 bp · + strandtrnI-GAU · gene · 100,240-101,248 bp · + strandtrnA-UGC · gene · 101,313-102,191 bp · + strandrrn23 · gene · 102,389-105,199 bp · + strandrrn4.5 · gene · 105,298-105,400 bp · + strandrrn5 · gene · 105,625-105,745 bp · + strandtrnR-ACG · gene · 105,980-106,058 bp · + strandtrnN-GUU · gene · 106,639-106,710 bp · − strandndhF · gene · 108,095-110,317 bp · − strandrpl32 · gene · 110,826-111,002 bp · + strandtrnL-UAG · gene · 111,726-111,805 bp · + strandccsA · gene · 111,917-112,888 bp · + strandndhD · gene · 113,070-114,590 bp · − strandpsaC · gene · 114,690-114,935 bp · − strandndhE · gene · 115,198-115,503 bp · − strandndhG · gene · 115,719-116,249 bp · − strandndhI · gene · 116,607-117,113 bp · − strandndhA · gene · 117,200-119,361 bp · − strandndhH · gene · 119,363-120,544 bp · − strandrps15 · gene · 120,645-120,917 bp · − strandycf1 · gene · 121,297-126,816 bp · − strandtrnN-GUU · gene · 127,137-127,208 bp · + strandtrnR-ACG · gene · 127,789-127,867 bp · − strandrrn5 · gene · 128,102-128,222 bp · − strandrrn4.5 · gene · 128,447-128,549 bp · − strandrrn23 · gene · 128,648-131,458 bp · − strandtrnA-UGC · gene · 131,656-132,534 bp · − strandtrnI-GAU · gene · 132,599-133,607 bp · − strandrrn16 · gene · 133,897-135,387 bp · − strandtrnV-GAC · gene · 135,615-135,686 bp · − strandrps7 · gene · 138,141-138,608 bp · + strandndhB · gene · 138,883-141,094 bp · + strandtrnL-CAA · gene · 141,639-141,719 bp · + strandycf15 · gene · 141,980-142,228 bp · − strandycf2 · gene · 142,271-149,113 bp · − strandtrnI-CAU · gene · 149,202-149,275 bp · + strandrpl23 · gene · 149,441-149,722 bp · + strandLamiaceae sp MQ-2024aANNOTATED PLASTOMEPQ414921.1151,263 bp · 129 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PQ414921.1Features: 129 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−88274
psbAgenephotosystem-ii−32113801059
trnK-UUUgenetranslation-rna−161442002586
matKgeneother−191434501536
rps16generibosomal-protein−513762831146
trnQ-UUGgenetranslation-rna−7271734372
psbKgenephotosystem-ii+76797865186
psbIgenephotosystem-ii+82428353111
trnG-UCCgenetranslation-rna+92339983750
trnR-UCUgenetranslation-rna+101551023075
atpAgeneatp-synthase−10326118501524
atpFgeneatp-synthase−11956131691213
atpHgeneatp-synthase−1354213788246
atpIgeneatp-synthase−1424614990744
rps2generibosomal-protein−1520115912711
rpoC2generna-polymerase−16134203134179
rpoC1generna-polymerase−20447232902843
rpoBgenerna-polymerase−23316265293213
trnC-GCAgenetranslation-rna+276102768676
petNgenecytochrome+285182860890
psbMgenephotosystem-ii−2939429499105
trnD-GUCgenetranslation-rna−300193009374
trnY-GUAgenetranslation-rna−302083029284
trnE-UUCgenetranslation-rna−303513042473
trnT-CGUgenetranslation-rna−309563102872
psbDgenephotosystem-ii+32275333371062
psbCgenephotosystem-ii+33284347061422
trnS-UGAgenetranslation-rna−349253501893
psbZgenephotosystem-ii+3534535534189
trnG-GCCgenetranslation-rna+357573582871
trnfM-CAUgenetranslation-rna−359783605274
rps14generibosomal-protein−3620136504303
psaBgenephotosystem-i−36631388362205
psaAgenephotosystem-i−38861411142253
ycf3geneother−41797437481951
trnS-GGAgenetranslation-rna+440644415187
rps4generibosomal-protein−4443845044606
trnT-UGUgenetranslation-rna−454374551073
trnL-UAAgenetranslation-rna+4619146765574
trnF-GAAgenetranslation-rna+470624713573
ndhJgenenad-dehydrogenase−4780248297495
ndhKgenenad-dehydrogenase−4837949057678
ndhCgenenad-dehydrogenase−4911049473363
trnV-UACgenetranslation-rna−5032350971648
trnM-CAUgenetranslation-rna+511545122773
atpEgeneatp-synthase−5144451846402
atpBgeneatp-synthase−51842533391497
rbcLgeneother+54123555901467
accDgeneother+56270577371467
psaIgenephotosystem-i+5842158532111
ycf4geneother+5897159526555
cemAgeneother+6007860768690
petAgenecytochrome+6098461947963
psbJgenephotosystem-ii−6299663119123
psbLgenephotosystem-ii−6325663373117
psbFgenephotosystem-ii−6339663516120
psbEgenephotosystem-ii−6353063782252
petLgenecytochrome+647116480796
petGgenecytochrome+6498265096114
trnW-CCAgenetranslation-rna−652326530674
trnP-UGGgenetranslation-rna−654926556674
psaJgenephotosystem-i+6584065975135
rpl33generibosomal-protein+6643766638201
rps18generibosomal-protein+6678467090306
rpl20generibosomal-protein−6728667694408
rps12generibosomal-protein−684539655328100
rps12generibosomal-protein+6845313808769634
clpPgeneother−68693705711878
psbBgenephotosystem-ii+71008725351527
psbTgenephotosystem-ii+7272772835108
psbNgenephotosystem-ii−7289573027132
psbHgenephotosystem-ii+7313073352222
petBgenecytochrome+73476748521376
petDgenecytochrome+75046762661220
rpoAgenerna-polymerase−76428774421014
rps11generibosomal-protein−7751377945432
rpl36generibosomal-protein−7803278146114
infAgeneother−7824178475234
rps8generibosomal-protein−7859679010414
rpl14generibosomal-protein−7918479553369
rpl16generibosomal-protein−79679809721293
rps3generibosomal-protein−8112281785663
rpl22generibosomal-protein−8176982234465
rps19generibosomal-protein−8229382563270
rpl23generibosomal-protein−8412484406282
trnI-CAUgenetranslation-rna−845718464574
ycf2geneother+84733915766843
ycf15geneother+9161891867249
trnL-CAAgenetranslation-rna−921279220881
ndhBgenenad-dehydrogenase−92752949642212
rps7generibosomal-protein−9523895706468
trnV-GACgenetranslation-rna+981609823272
rrn16generibosomal-rna+98459999501491
trnI-GAUgenetranslation-rna+1002391012481009
trnA-UGCgenetranslation-rna+101312102191879
rrn23generibosomal-rna+1023881051992811
rrn4.5generibosomal-rna+105297105400103
rrn5generibosomal-rna+105624105745121
trnR-ACGgenetranslation-rna+10597910605879
trnN-GUUgenetranslation-rna−10663810671072
ndhFgenenad-dehydrogenase−1080941103172223
rpl32generibosomal-protein+110825111002177
trnL-UAGgenetranslation-rna+11172511180580
ccsAgeneother+111916112888972
ndhDgenenad-dehydrogenase−1130691145901521
psaCgenephotosystem-i−114689114935246
ndhEgenenad-dehydrogenase−115197115503306
ndhGgenenad-dehydrogenase−115718116249531
ndhIgenenad-dehydrogenase−116606117113507
ndhAgenenad-dehydrogenase−1171991193612162
ndhHgenenad-dehydrogenase−1193621205441182
rps15generibosomal-protein−120644120917273
ycf1geneother−1212961268165520
trnN-GUUgenetranslation-rna+12713612720872
trnR-ACGgenetranslation-rna−12778812786779
rrn5generibosomal-rna−128101128222121
rrn4.5generibosomal-rna−128446128549103
rrn23generibosomal-rna−1286471314582811
trnA-UGCgenetranslation-rna−131655132534879
trnI-GAUgenetranslation-rna−1325981336071009
rrn16generibosomal-rna−1338961353871491
trnV-GACgenetranslation-rna−13561413568672
rps7generibosomal-protein+138140138608468
ndhBgenenad-dehydrogenase+1388821410942212
trnL-CAAgenetranslation-rna+14163814171981
ycf15geneother−141979142228249
ycf2geneother−1422701491136843
trnI-CAUgenetranslation-rna+14920114927574
rpl23generibosomal-protein+149440149722282

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources