Lavandula pedunculata subsp. lusitanica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · ON641259.1 · 8–82 bp · −
psbA · ON641259.1 · 380–1,438 bp · −
trnK-UUU · ON641259.1 · 1,670–4,257 bp · −
matK · ON641259.1 · 1,984–3,504 bp · −
rps16 · ON641259.1 · 4,801–5,874 bp · −
trnQ-UUG · ON641259.1 · 6,853–6,924 bp · −
trnS-GCU · ON641259.1 · 8,148–8,235 bp · −
atpA · ON641259.1 · 10,023–11,546 bp · −
atpF · ON641259.1 · 11,638–12,888 bp · −
atpH · ON641259.1 · 13,162–13,407 bp · −
atpI · ON641259.1 · 14,427–15,170 bp · −
rps2 · ON641259.1 · 15,396–16,106 bp · −
rpoC2 · ON641259.1 · 16,309–20,484 bp · −
rpoC1 · ON641259.1 · 20,661–23,489 bp · −
rpoB · ON641259.1 · 23,516–26,728 bp · −
psbM · ON641259.1 · 29,261–29,365 bp · −
trnD-GUC · ON641259.1 · 29,889–29,962 bp · −
trnY-GUA · ON641259.1 · 30,078–30,161 bp · −
trnE-UUC · ON641259.1 · 30,234–30,306 bp · −
trnS-UGA · ON641259.1 · 34,966–35,058 bp · −
trnfM-CAU · ON641259.1 · 36,076–36,149 bp · −
rps14 · ON641259.1 · 36,299–36,601 bp · −
psaB · ON641259.1 · 36,729–38,933 bp · −
psaA · ON641259.1 · 38,959–41,211 bp · −
pafI · ON641259.1 · 42,045–43,998 bp · −
rps4 · ON641259.1 · 45,207–45,812 bp · −
trnT-UGU · ON641259.1 · 46,199–46,271 bp · −
ndhJ · ON641259.1 · 48,584–49,060 bp · −
ndhK · ON641259.1 · 49,185–49,856 bp · −
ndhC · ON641259.1 · 49,908–50,270 bp · −
trnV-UAC · ON641259.1 · 51,194–51,852 bp · −
atpE · ON641259.1 · 52,294–52,695 bp · −
atpB · ON641259.1 · 52,692–54,188 bp · −
psbJ · ON641259.1 · 63,716–63,838 bp · −
psbL · ON641259.1 · 63,973–64,089 bp · −
psbF · ON641259.1 · 64,113–64,232 bp · −
psbE · ON641259.1 · 64,247–64,498 bp · −
trnW-CCA · ON641259.1 · 65,923–65,996 bp · −
trnP-UGG · ON641259.1 · 66,154–66,227 bp · −
rpl20 · ON641259.1 · 67,983–68,333 bp · −
rps12 · ON641259.1 · 69,146–69,259 bp · −
rps12 · ON641259.1 · 96,472–97,265 bp · −
clpP1 · ON641259.1 · 69,374–71,326 bp · −
pbf1 · ON641259.1 · 73,647–73,778 bp · −
rpoA · ON641259.1 · 77,115–78,122 bp · −
rps11 · ON641259.1 · 78,192–78,608 bp · −
rpl36 · ON641259.1 · 78,718–78,831 bp · −
infA · ON641259.1 · 78,926–79,159 bp · −
rps8 · ON641259.1 · 79,290–79,700 bp · −
rpl14 · ON641259.1 · 79,889–80,257 bp · −
rpl16 · ON641259.1 · 80,356–81,610 bp · −
rps3 · ON641259.1 · 81,745–82,407 bp · −
rpl22 · ON641259.1 · 82,392–82,859 bp · −
rps19 · ON641259.1 · 82,924–83,202 bp · −
rpl2 · ON641259.1 · 83,262–84,750 bp · −
rpl23 · ON641259.1 · 84,769–85,050 bp · −
trnI-CAU · ON641259.1 · 85,216–85,289 bp · −
trnL-CAA · ON641259.1 · 92,826–92,906 bp · −
ndhB · ON641259.1 · 93,474–95,677 bp · −
rps7 · ON641259.1 · 95,952–96,419 bp · −
trnN-GUU · ON641259.1 · 107,319–107,390 bp · −
ndhF · ON641259.1 · 108,744–110,975 bp · −
ndhD · ON641259.1 · 113,765–114,916 bp · −
psaC · ON641259.1 · 115,389–115,634 bp · −
ndhE · ON641259.1 · 115,890–116,195 bp · −
ndhG · ON641259.1 · 116,410–116,940 bp · −
ndhI · ON641259.1 · 117,292–117,798 bp · −
ndhA · ON641259.1 · 117,874–120,000 bp · −
ndhH · ON641259.1 · 120,002–121,183 bp · −
rps15 · ON641259.1 · 121,271–121,561 bp · −
ycf1 · ON641259.1 · 121,974–127,481 bp · −
trnR-ACG · ON641259.1 · 128,452–128,525 bp · −
rrn5 · ON641259.1 · 128,768–128,888 bp · −
rrn4.5 · ON641259.1 · 129,144–129,246 bp · −
rrn23 · ON641259.1 · 129,345–132,155 bp · −
trnA-UGC · ON641259.1 · 132,317–133,196 bp · −
trnI-GAU · ON641259.1 · 133,268–134,289 bp · −
rrn16 · ON641259.1 · 134,587–136,077 bp · −
trnV-GAC · ON641259.1 · 136,304–136,375 bp · −
ycf15 · ON641259.1 · 142,636–142,884 bp · −
ycf2 · ON641259.1 · 142,975–149,823 bp · −
psbK · ON641259.1 · 7,320–7,505 bp · +
psbI · ON641259.1 · 7,890–8,000 bp · +
trnG-UCC · ON641259.1 · 8,901–9,669 bp · +
trnR-UCU · ON641259.1 · 9,847–9,918 bp · +
trnC-GCA · ON641259.1 · 27,884–27,954 bp · +
petN · ON641259.1 · 28,121–28,210 bp · +
trnT-GGU · ON641259.1 · 30,887–30,958 bp · +
psbD · ON641259.1 · 32,293–33,354 bp · +
psbC · ON641259.1 · 33,338–34,723 bp · +
psbZ · ON641259.1 · 35,405–35,593 bp · +
trnG-GCC · ON641259.1 · 35,840–35,910 bp · +
trnS-GGA · ON641259.1 · 44,835–44,921 bp · +
trnL-UAA · ON641259.1 · 46,958–47,522 bp · +
trnF-GAA · ON641259.1 · 47,823–47,895 bp · +
trnM-CAU · ON641259.1 · 52,033–52,105 bp · +
rbcL · ON641259.1 · 54,966–56,405 bp · +
accD · ON641259.1 · 57,136–58,617 bp · +
psaI · ON641259.1 · 59,347–59,457 bp · +
pafII · ON641259.1 · 59,901–60,455 bp · +
cemA · ON641259.1 · 61,030–61,719 bp · +
petA · ON641259.1 · 61,945–62,907 bp · +
petL · ON641259.1 · 65,417–65,512 bp · +
petG · ON641259.1 · 65,687–65,800 bp · +
psaJ · ON641259.1 · 66,501–66,635 bp · +
rpl33 · ON641259.1 · 67,082–67,282 bp · +
rps18 · ON641259.1 · 67,453–67,758 bp · +
psbB · ON641259.1 · 71,779–73,305 bp · +
psbT · ON641259.1 · 73,480–73,581 bp · +
psbH · ON641259.1 · 73,884–74,105 bp · +
petB · ON641259.1 · 74,228–75,590 bp · +
petD · ON641259.1 · 75,780–76,938 bp · +
ycf2 · ON641259.1 · 85,378–92,226 bp · +
ycf15 · ON641259.1 · 92,317–92,565 bp · +
trnV-GAC · ON641259.1 · 98,826–98,897 bp · +
rrn16 · ON641259.1 · 99,124–100,614 bp · +
trnI-GAU · ON641259.1 · 100,912–101,933 bp · +
trnA-UGC · ON641259.1 · 102,005–102,884 bp · +
rrn23 · ON641259.1 · 103,046–105,856 bp · +
rrn4.5 · ON641259.1 · 105,955–106,057 bp · +
rrn5 · ON641259.1 · 106,313–106,433 bp · +
trnR-ACG · ON641259.1 · 106,676–106,749 bp · +
ycf1 · ON641259.1 · 107,720–108,775 bp · +
rpl32 · ON641259.1 · 111,460–111,630 bp · +
trnL-UAG · ON641259.1 · 112,389–112,468 bp · +
ccsA · ON641259.1 · 112,559–113,530 bp · +
trnN-GUU · ON641259.1 · 127,811–127,882 bp · +
rps7 · ON641259.1 · 138,782–139,249 bp · +
ndhB · ON641259.1 · 139,524–141,727 bp · +
trnL-CAA · ON641259.1 · 142,295–142,375 bp · +
trnI-CAU · ON641259.1 · 149,912–149,985 bp · +
rpl23 · ON641259.1 · 150,151–150,432 bp · +
rpl2 · ON641259.1 · 150,451–151,939 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lavandula pedunculata subsp. lusitanica
ANNOTATED PLASTOME
ON641259.1
152,039 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38010 76020 114029 152039 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 8 82 75 Locate
psbA gene − 380 1438 1059 Locate
trnK-UUU gene − 1670 4257 2588 Locate
matK gene − 1984 3504 1521 Locate
rps16 gene − 4801 5874 1074 Locate
trnQ-UUG gene − 6853 6924 72 Locate
psbK gene + 7320 7505 186 Locate
psbI gene + 7890 8000 111 Locate
trnS-GCU gene − 8148 8235 88 Locate
trnG-UCC gene + 8901 9669 769 Locate
trnR-UCU gene + 9847 9918 72 Locate
atpA gene − 10023 11546 1524 Locate
atpF gene − 11638 12888 1251 Locate
atpH gene − 13162 13407 246 Locate
atpI gene − 14427 15170 744 Locate
rps2 gene − 15396 16106 711 Locate
rpoC2 gene − 16309 20484 4176 Locate
rpoC1 gene − 20661 23489 2829 Locate
rpoB gene − 23516 26728 3213 Locate
trnC-GCA gene + 27884 27954 71 Locate
petN gene + 28121 28210 90 Locate
psbM gene − 29261 29365 105 Locate
trnD-GUC gene − 29889 29962 74 Locate
trnY-GUA gene − 30078 30161 84 Locate
trnE-UUC gene − 30234 30306 73 Locate
trnT-GGU gene + 30887 30958 72 Locate
psbD gene + 32293 33354 1062 Locate
psbC gene + 33338 34723 1386 Locate
trnS-UGA gene − 34966 35058 93 Locate
psbZ gene + 35405 35593 189 Locate
trnG-GCC gene + 35840 35910 71 Locate
trnfM-CAU gene − 36076 36149 74 Locate
rps14 gene − 36299 36601 303 Locate
psaB gene − 36729 38933 2205 Locate
psaA gene − 38959 41211 2253 Locate
pafI gene − 42045 43998 1954 Locate
trnS-GGA gene + 44835 44921 87 Locate
rps4 gene − 45207 45812 606 Locate
trnT-UGU gene − 46199 46271 73 Locate
trnL-UAA gene + 46958 47522 565 Locate
trnF-GAA gene + 47823 47895 73 Locate
ndhJ gene − 48584 49060 477 Locate
ndhK gene − 49185 49856 672 Locate
ndhC gene − 49908 50270 363 Locate
trnV-UAC gene − 51194 51852 659 Locate
trnM-CAU gene + 52033 52105 73 Locate
atpE gene − 52294 52695 402 Locate
atpB gene − 52692 54188 1497 Locate
rbcL gene + 54966 56405 1440 Locate
accD gene + 57136 58617 1482 Locate
psaI gene + 59347 59457 111 Locate
pafII gene + 59901 60455 555 Locate
cemA gene + 61030 61719 690 Locate
petA gene + 61945 62907 963 Locate
psbJ gene − 63716 63838 123 Locate
psbL gene − 63973 64089 117 Locate
psbF gene − 64113 64232 120 Locate
psbE gene − 64247 64498 252 Locate
petL gene + 65417 65512 96 Locate
petG gene + 65687 65800 114 Locate
trnW-CCA gene − 65923 65996 74 Locate
trnP-UGG gene − 66154 66227 74 Locate
psaJ gene + 66501 66635 135 Locate
rpl33 gene + 67082 67282 201 Locate
rps18 gene + 67453 67758 306 Locate
rpl20 gene − 67983 68333 351 Locate
rps12 gene − 69146 69259 114 Locate
clpP1 gene − 69374 71326 1953 Locate
psbB gene + 71779 73305 1527 Locate
psbT gene + 73480 73581 102 Locate
pbf1 gene − 73647 73778 132 Locate
psbH gene + 73884 74105 222 Locate
petB gene + 74228 75590 1363 Locate
petD gene + 75780 76938 1159 Locate
rpoA gene − 77115 78122 1008 Locate
rps11 gene − 78192 78608 417 Locate
rpl36 gene − 78718 78831 114 Locate
infA gene − 78926 79159 234 Locate
rps8 gene − 79290 79700 411 Locate
rpl14 gene − 79889 80257 369 Locate
rpl16 gene − 80356 81610 1255 Locate
rps3 gene − 81745 82407 663 Locate
rpl22 gene − 82392 82859 468 Locate
rps19 gene − 82924 83202 279 Locate
rpl2 gene − 83262 84750 1489 Locate
rpl23 gene − 84769 85050 282 Locate
trnI-CAU gene − 85216 85289 74 Locate
ycf2 gene + 85378 92226 6849 Locate
ycf15 gene + 92317 92565 249 Locate
trnL-CAA gene − 92826 92906 81 Locate
ndhB gene − 93474 95677 2204 Locate
rps7 gene − 95952 96419 468 Locate
rps12 gene − 96472 97265 794 Locate
trnV-GAC gene + 98826 98897 72 Locate
rrn16 gene + 99124 100614 1491 Locate
trnI-GAU gene + 100912 101933 1022 Locate
trnA-UGC gene + 102005 102884 880 Locate
rrn23 gene + 103046 105856 2811 Locate
rrn4.5 gene + 105955 106057 103 Locate
rrn5 gene + 106313 106433 121 Locate
trnR-ACG gene + 106676 106749 74 Locate
trnN-GUU gene − 107319 107390 72 Locate
ycf1 gene + 107720 108775 1056 Locate
ndhF gene − 108744 110975 2232 Locate
rpl32 gene + 111460 111630 171 Locate
trnL-UAG gene + 112389 112468 80 Locate
ccsA gene + 112559 113530 972 Locate
ndhD gene − 113765 114916 1152 Locate
psaC gene − 115389 115634 246 Locate
ndhE gene − 115890 116195 306 Locate
ndhG gene − 116410 116940 531 Locate
ndhI gene − 117292 117798 507 Locate
ndhA gene − 117874 120000 2127 Locate
ndhH gene − 120002 121183 1182 Locate
rps15 gene − 121271 121561 291 Locate
ycf1 gene − 121974 127481 5508 Locate
trnN-GUU gene + 127811 127882 72 Locate
trnR-ACG gene − 128452 128525 74 Locate
rrn5 gene − 128768 128888 121 Locate
rrn4.5 gene − 129144 129246 103 Locate
rrn23 gene − 129345 132155 2811 Locate
trnA-UGC gene − 132317 133196 880 Locate
trnI-GAU gene − 133268 134289 1022 Locate
rrn16 gene − 134587 136077 1491 Locate
trnV-GAC gene − 136304 136375 72 Locate
rps7 gene + 138782 139249 468 Locate
ndhB gene + 139524 141727 2204 Locate
trnL-CAA gene + 142295 142375 81 Locate
ycf15 gene − 142636 142884 249 Locate
ycf2 gene − 142975 149823 6849 Locate
trnI-CAU gene + 149912 149985 74 Locate
rpl23 gene + 150151 150432 282 Locate
rpl2 gene + 150451 151939 1489 Locate
Status Available
Accession ON641259.1
Length 152,039 bp
GC content 37.9%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources