Coordinate-aware organelle record

Loxocalyx urticifolius chloroplast genome

Available PQ231101.1 151,974 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	5	79	74
psbA	gene	photosystem-ii	−	311	1370	1059
trnK-UUU	gene	translation-rna	−	1602	4192	2590
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5108	6249	1141
trnQ-UUG	gene	translation-rna	−	7232	7304	72
psbK	gene	photosystem-ii	+	7640	7826	186
psbI	gene	photosystem-ii	+	8204	8315	111
trnS-GGA	gene	translation-rna	−	8440	8528	88
trnG-UCC	gene	translation-rna	+	9214	9965	751
trnR-UCU	gene	translation-rna	+	10138	10213	75
atpA	gene	atp-synthase	−	10309	11833	1524
atpF	gene	atp-synthase	−	11921	13134	1213
atpH	gene	atp-synthase	−	13497	13743	246
atpI	gene	atp-synthase	−	14720	15464	744
rps2	gene	ribosomal-protein	−	15694	16405	711
rpoC2	gene	rna-polymerase	−	16624	20815	4191
rpoC1	gene	rna-polymerase	−	20969	23808	2839
rpoB	gene	rna-polymerase	−	23834	27047	3213
trnC-GCA	gene	translation-rna	+	28148	28224	76
petN	gene	cytochrome	+	29059	29149	90
psbM	gene	photosystem-ii	−	29933	30038	105
trnD-GUC	gene	translation-rna	−	30582	30656	74
trnY-GUA	gene	translation-rna	−	30770	30854	84
trnE-UUC	gene	translation-rna	−	30913	30986	73
trnT-CGU	gene	translation-rna	−	31572	31644	72
psbD	gene	photosystem-ii	+	32896	33958	1062
psbC	gene	photosystem-ii	+	33905	35327	1422
trnS-UGA	gene	translation-rna	−	35558	35651	93
psbZ	gene	photosystem-ii	+	35915	36104	189
trnG-GCC	gene	translation-rna	+	36335	36406	71
trnfM-CAU	gene	translation-rna	−	36554	36628	74
rps14	gene	ribosomal-protein	−	36777	37080	303
psaB	gene	photosystem-i	−	37207	39412	2205
psaA	gene	photosystem-i	−	39437	41690	2253
ycf3	gene	other	−	42415	44360	1945
trnS-GGA	gene	translation-rna	+	44676	44763	87
rps4	gene	ribosomal-protein	−	45046	45652	606
trnT-UGU	gene	translation-rna	−	46050	46123	73
trnL-UAA	gene	translation-rna	+	46804	47378	574
trnF-GAA	gene	translation-rna	+	47669	47742	73
ndhJ	gene	nad-dehydrogenase	−	48411	48906	495
ndhK	gene	nad-dehydrogenase	−	48988	49666	678
ndhC	gene	nad-dehydrogenase	−	49719	50082	363
trnV-UAC	gene	translation-rna	−	50744	51403	659
trnM-CAU	gene	translation-rna	+	51591	51664	73
atpE	gene	atp-synthase	−	51881	52283	402
atpB	gene	atp-synthase	−	52279	53776	1497
rbcL	gene	other	+	54569	56036	1467
accD	gene	other	+	56733	58200	1467
psaI	gene	photosystem-i	+	58884	58995	111
ycf4	gene	other	+	59433	59988	555
cemA	gene	other	+	60558	61248	690
petA	gene	cytochrome	+	61464	62427	963
psbJ	gene	photosystem-ii	−	63471	63594	123
psbL	gene	photosystem-ii	−	63731	63848	117
psbF	gene	photosystem-ii	−	63871	63991	120
psbE	gene	photosystem-ii	−	64005	64257	252
petL	gene	cytochrome	+	65186	65282	96
petG	gene	cytochrome	+	65456	65570	114
trnW-CCA	gene	translation-rna	−	65695	65769	74
trnP-UGG	gene	translation-rna	−	65932	66006	74
psaJ	gene	photosystem-i	+	66280	66415	135
rpl33	gene	ribosomal-protein	+	66887	67088	201
rps18	gene	ribosomal-protein	+	67235	67541	306
rpl20	gene	ribosomal-protein	−	67758	68145	387
rps12	gene	ribosomal-protein	−	68900	97027	28127
rps12	gene	ribosomal-protein	+	68900	138681	69781
clpP	gene	other	−	69139	71011	1872
psbB	gene	photosystem-ii	+	71441	72968	1527
psbT	gene	photosystem-ii	+	73160	73268	108
psbN	gene	photosystem-ii	−	73328	73460	132
psbH	gene	photosystem-ii	+	73563	73785	222
petB	gene	cytochrome	+	73909	75301	1392
petD	gene	cytochrome	+	75495	76709	1214
rpoA	gene	rna-polymerase	−	76877	77891	1014
rps11	gene	ribosomal-protein	−	77962	78394	432
rpl36	gene	ribosomal-protein	−	78481	78595	114
infA	gene	other	−	78690	78924	234
rps8	gene	ribosomal-protein	−	79046	79460	414
rpl14	gene	ribosomal-protein	−	79632	80001	369
rpl16	gene	ribosomal-protein	−	80127	81407	1280
rps3	gene	ribosomal-protein	−	81553	82216	663
rpl22	gene	ribosomal-protein	−	82200	82665	465
rps19	gene	ribosomal-protein	−	82724	83003	279
rpl2	gene	ribosomal-protein	−	83055	84547	1492
rpl23	gene	ribosomal-protein	−	84565	84847	282
trnI-CAU	gene	translation-rna	−	85012	85086	74
ycf2	gene	other	+	85174	92059	6885
ycf15	gene	other	+	92101	92350	249
trnL-CAA	gene	translation-rna	−	92601	92682	81
ndhB	gene	nad-dehydrogenase	−	93226	95438	2212
rps7	gene	ribosomal-protein	−	95712	96180	468
trnV-GAC	gene	translation-rna	+	98665	98737	72
rrn16	gene	ribosomal-rna	+	98964	100455	1491
trnI-GAU	gene	translation-rna	+	100744	101753	1009
trnA-UGC	gene	translation-rna	+	101817	102696	879
rrn23	gene	ribosomal-rna	+	102887	105698	2811
rrn4.5	gene	ribosomal-rna	+	105796	105899	103
rrn5	gene	ribosomal-rna	+	106154	106275	121
trnR-ACG	gene	translation-rna	+	106504	106583	79
trnN-GUU	gene	translation-rna	−	107152	107224	72
ndhF	gene	nad-dehydrogenase	−	108613	110836	2223
rpl32	gene	ribosomal-protein	+	111342	111519	177
trnL-UAG	gene	translation-rna	+	112248	112328	80
ccsA	gene	other	+	112418	113390	972
ndhD	gene	nad-dehydrogenase	−	113572	115093	1521
psaC	gene	photosystem-i	−	115198	115444	246
ndhE	gene	nad-dehydrogenase	−	115706	116012	306
ndhG	gene	nad-dehydrogenase	−	116228	116759	531
ndhI	gene	nad-dehydrogenase	−	117124	117631	507
ndhA	gene	nad-dehydrogenase	−	117717	119884	2167
ndhH	gene	nad-dehydrogenase	−	119885	121067	1182
rps15	gene	ribosomal-protein	−	121167	121440	273
ycf1	gene	other	−	121824	127365	5541
trnN-GUU	gene	translation-rna	+	127690	127762	72
trnR-ACG	gene	translation-rna	−	128331	128410	79
rrn5	gene	ribosomal-rna	−	128639	128760	121
rrn4.5	gene	ribosomal-rna	−	129015	129118	103
rrn23	gene	ribosomal-rna	−	129216	132027	2811
trnA-UGC	gene	translation-rna	−	132218	133097	879
trnI-GAU	gene	translation-rna	−	133161	134170	1009
rrn16	gene	ribosomal-rna	−	134459	135950	1491
trnV-GAC	gene	translation-rna	−	136177	136249	72
rps7	gene	ribosomal-protein	+	138734	139202	468
ndhB	gene	nad-dehydrogenase	+	139476	141688	2212
trnL-CAA	gene	translation-rna	+	142232	142313	81
ycf15	gene	other	−	142564	142813	249
ycf2	gene	other	−	142855	149740	6885
trnI-CAU	gene	translation-rna	+	149828	149902	74
rpl23	gene	ribosomal-protein	+	150067	150349	282
rpl2	gene	ribosomal-protein	+	150367	151859	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ231101.1DNA · accDPQ231101DNA · atpBPQ231101DNA · matKPQ231101DNA · ndhFPQ231101DNA · psbAPQ231101DNA · rbcLPQ231101DNA · rps12PQ231101DNA · ycf1PQ231101