Coordinate-aware organelle record

Meehania henryi chloroplast genome

Available OP204791.1 151,773 bp 132 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 5-79 bp · − strandpsbA · gene · 396-1,454 bp · − strandtrnK-UUU · gene · 1,693-4,290 bp · − strandmatK · gene · 2,019-3,551 bp · − strandrps16 · gene · 4,545-5,687 bp · − strandtrnQ-UUG · gene · 6,691-6,762 bp · − strandpsbK · gene · 7,130-7,315 bp · + strandpsbI · gene · 7,705-7,815 bp · + strandtrnS-GCU · gene · 7,956-8,043 bp · − strandtrnG-UCC · gene · 8,762-9,514 bp · + strandtrnR-UCU · gene · 9,700-9,771 bp · + strandatpA · gene · 9,879-11,402 bp · − strandatpF · gene · 11,501-12,737 bp · − strandatpH · gene · 13,005-13,250 bp · − strandatpI · gene · 14,272-15,015 bp · − strandrps2 · gene · 15,239-15,949 bp · − strandrpoC2 · gene · 16,157-20,344 bp · − strandrpoC1 · gene · 20,505-23,326 bp · − strandrpoB · gene · 23,353-26,571 bp · − strandtrnC-GCA · gene · 27,725-27,795 bp · + strandpetN · gene · 27,950-28,045 bp · + strandpsbM · gene · 29,036-29,140 bp · − strandtrnD-GUC · gene · 29,665-29,738 bp · − strandtrnY-GUA · gene · 29,849-29,932 bp · − strandtrnE-UUC · gene · 30,008-30,080 bp · − strandtrnT-GGU · gene · 30,622-30,693 bp · + strandpsbD · gene · 32,028-33,089 bp · + strandpsbC · gene · 33,037-34,458 bp · + strandtrnS-UGA · gene · 34,720-34,811 bp · − strandpsbZ · gene · 35,147-35,335 bp · + strandtrnG-GCC · gene · 35,606-35,676 bp · + strandtrnfM-CAU · gene · 35,842-35,915 bp · − strandrps14 · gene · 36,065-36,367 bp · − strandpsaB · gene · 36,490-38,694 bp · − strandpsaA · gene · 38,720-40,972 bp · − strandycf3 · gene · 41,765-43,709 bp · − strandtrnS-GGA · gene · 44,544-44,630 bp · + strandrps4 · gene · 44,913-45,518 bp · − strandtrnT-UGU · gene · 45,888-45,960 bp · − strandtrnL-UAA · gene · 46,669-47,233 bp · + strandtrnF-GAA · gene · 47,529-47,601 bp · + strandndhJ · gene · 48,251-48,727 bp · − strandndhK · gene · 48,838-49,515 bp · − strandndhC · gene · 49,567-49,929 bp · − strandtrnV-UAC · gene · 50,867-51,519 bp · − strandtrnM-CAU · gene · 51,700-51,772 bp · + strandatpE · gene · 51,983-52,384 bp · − strandatpB · gene · 52,381-53,877 bp · − strandrbcL · gene · 54,679-56,112 bp · + strandaccD · gene · 56,804-58,285 bp · + strandpsaI · gene · 58,759-58,869 bp · + strandycf4 · gene · 59,322-59,876 bp · + strandcemA · gene · 60,537-61,226 bp · + strandpetA · gene · 61,441-62,403 bp · + strandpsbJ · gene · 63,447-63,569 bp · − strandpsbL · gene · 63,704-63,820 bp · − strandpsbF · gene · 63,844-63,963 bp · − strandpsbE · gene · 63,978-64,229 bp · − strandpetL · gene · 65,124-65,219 bp · + strandpetG · gene · 65,396-65,509 bp · + strandtrnW-CCA · gene · 65,628-65,701 bp · − strandtrnP-UGG · gene · 65,877-65,950 bp · − strandpsaJ · gene · 66,231-66,365 bp · + strandrpl33 · gene · 66,800-67,000 bp · + strandrps18 · gene · 67,185-67,490 bp · + strandrpl20 · gene · 67,713-68,099 bp · − strandrps12 · gene · 68,895-97,092 bp · − strandrps12 · gene · 68,895-138,461 bp · + strandclpP · gene · 69,132-71,060 bp · − strandpsbB · gene · 71,570-73,024 bp · + strandpsbT · gene · 73,209-73,316 bp · + strandpsbN · gene · 73,377-73,508 bp · − strandpsbH · gene · 73,614-73,835 bp · + strandpetB · gene · 73,961-75,328 bp · + strandpetD · gene · 75,516-76,710 bp · + strandrpoA · gene · 76,887-77,894 bp · − strandrps11 · gene · 77,965-78,381 bp · − strandrpl36 · gene · 78,491-78,604 bp · − strandinfA · gene · 78,700-78,933 bp · − strandrps8 · gene · 79,062-79,466 bp · − strandrpl14 · gene · 79,657-80,025 bp · − strandrpl16 · gene · 80,157-81,428 bp · − strandrps3 · gene · 81,580-82,242 bp · − strandrpl22 · gene · 82,227-82,694 bp · − strandrps19 · gene · 82,764-83,042 bp · − strandrpl2 · gene · 83,106-84,595 bp · − strandrpl23 · gene · 84,614-84,895 bp · − strandtrnI-CAU · gene · 85,073-85,146 bp · − strandycf2 · gene · 85,235-92,062 bp · + strandycf15 · gene · 92,204-92,401 bp · + strandtrnL-CAA · gene · 92,662-92,742 bp · − strandndhB · gene · 93,305-95,512 bp · − strandrps7 · gene · 95,778-96,245 bp · − strandtrnV-GAC · gene · 98,756-98,827 bp · + strandrrn16S · gene · 99,055-100,544 bp · + strandtrnI-GAU · gene · 100,843-101,861 bp · + strandtrnA-UGC · gene · 101,948-102,826 bp · + strandrrn23S · gene · 102,993-105,802 bp · + strandrrn4.5S · gene · 105,901-106,003 bp · + strandrrn5S · gene · 106,256-106,376 bp · + strandtrnR-ACG · gene · 106,620-106,693 bp · + strandtrnN-GUU · gene · 107,218-107,290 bp · − strandndhF · gene · 108,658-110,871 bp · − strandrpl32 · gene · 111,333-111,503 bp · + strandtrnL-UAG · gene · 112,243-112,322 bp · + strandccsA · gene · 112,423-113,400 bp · + strandndhD · gene · 113,650-115,152 bp · − strandpsaC · gene · 115,271-115,516 bp · − strandndhE · gene · 115,773-116,078 bp · − strandndhG · gene · 116,311-116,841 bp · − strandndhI · gene · 116,948-117,454 bp · − strandndhA · gene · 117,535-119,638 bp · − strandndhH · gene · 119,640-120,827 bp · − strandrps15 · gene · 120,927-121,199 bp · − strandycf1 · gene · 121,594-125,880 bp · − strandtrnN-GUU · gene · 127,470-127,542 bp · + strandtrnR-ACG · gene · 128,067-128,140 bp · − strandrrn5S · gene · 128,384-128,504 bp · − strandrrn4.5S · gene · 128,757-128,859 bp · − strandrrn23S · gene · 128,958-131,767 bp · − strandtrnA-UGC · gene · 131,934-132,812 bp · − strandtrnI-GAU · gene · 132,899-133,917 bp · − strandrrn16S · gene · 134,216-135,705 bp · − strandtrnV-GAC · gene · 135,933-136,004 bp · − strandrps7 · gene · 138,515-138,982 bp · + strandndhB · gene · 139,248-141,455 bp · + strandtrnL-CAA · gene · 142,018-142,098 bp · + strandycf15 · gene · 142,359-142,556 bp · − strandycf2 · gene · 142,698-149,525 bp · − strandtrnI-CAU · gene · 149,614-149,687 bp · + strandrpl23 · gene · 149,865-150,146 bp · + strandrpl2 · gene · 150,165-151,654 bp · + strandMeehania henryiANNOTATED PLASTOMEOP204791.1151,773 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: OP204791.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

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132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−47975
psbAgenephotosystem-ii−39514541059
trnK-UUUgenetranslation-rna−169242902598
matKgeneother−201835511533
rps16generibosomal-protein−454456871143
trnQ-UUGgenetranslation-rna−6690676272
psbKgenephotosystem-ii+71297315186
psbIgenephotosystem-ii+77047815111
trnS-GCUgenetranslation-rna−7955804388
trnG-UCCgenetranslation-rna+87619514753
trnR-UCUgenetranslation-rna+9699977172
atpAgeneatp-synthase−9878114021524
atpFgeneatp-synthase−11500127371237
atpHgeneatp-synthase−1300413250246
atpIgeneatp-synthase−1427115015744
rps2generibosomal-protein−1523815949711
rpoC2generna-polymerase−16156203444188
rpoC1generna-polymerase−20504233262822
rpoBgenerna-polymerase−23352265713219
trnC-GCAgenetranslation-rna+277242779571
petNgenecytochrome+279492804596
psbMgenephotosystem-ii−2903529140105
trnD-GUCgenetranslation-rna−296642973874
trnY-GUAgenetranslation-rna−298482993284
trnE-UUCgenetranslation-rna−300073008073
trnT-GGUgenetranslation-rna+306213069372
psbDgenephotosystem-ii+32027330891062
psbCgenephotosystem-ii+33036344581422
trnS-UGAgenetranslation-rna−347193481192
psbZgenephotosystem-ii+3514635335189
trnG-GCCgenetranslation-rna+356053567671
trnfM-CAUgenetranslation-rna−358413591574
rps14generibosomal-protein−3606436367303
psaBgenephotosystem-i−36489386942205
psaAgenephotosystem-i−38719409722253
ycf3geneother−41764437091945
trnS-GGAgenetranslation-rna+445434463087
rps4generibosomal-protein−4491245518606
trnT-UGUgenetranslation-rna−458874596073
trnL-UAAgenetranslation-rna+4666847233565
trnF-GAAgenetranslation-rna+475284760173
ndhJgenenad-dehydrogenase−4825048727477
ndhKgenenad-dehydrogenase−4883749515678
ndhCgenenad-dehydrogenase−4956649929363
trnV-UACgenetranslation-rna−5086651519653
trnM-CAUgenetranslation-rna+516995177273
atpEgeneatp-synthase−5198252384402
atpBgeneatp-synthase−52380538771497
rbcLgeneother+54678561121434
accDgeneother+56803582851482
psaIgenephotosystem-i+5875858869111
ycf4geneother+5932159876555
cemAgeneother+6053661226690
petAgenecytochrome+6144062403963
psbJgenephotosystem-ii−6344663569123
psbLgenephotosystem-ii−6370363820117
psbFgenephotosystem-ii−6384363963120
psbEgenephotosystem-ii−6397764229252
petLgenecytochrome+651236521996
petGgenecytochrome+6539565509114
trnW-CCAgenetranslation-rna−656276570174
trnP-UGGgenetranslation-rna−658766595074
psaJgenephotosystem-i+6623066365135
rpl33generibosomal-protein+6679967000201
rps18generibosomal-protein+6718467490306
rpl20generibosomal-protein−6771268099387
rps12generibosomal-protein−688949709228198
rps12generibosomal-protein+6889413846169567
clpPgeneother−69131710601929
psbBgenephotosystem-ii+71569730241455
psbTgenephotosystem-ii+7320873316108
psbNgenephotosystem-ii−7337673508132
psbHgenephotosystem-ii+7361373835222
petBgenecytochrome+73960753281368
petDgenecytochrome+75515767101195
rpoAgenerna-polymerase−76886778941008
rps11generibosomal-protein−7796478381417
rpl36generibosomal-protein−7849078604114
infAgeneother−7869978933234
rps8generibosomal-protein−7906179466405
rpl14generibosomal-protein−7965680025369
rpl16generibosomal-protein−80156814281272
rps3generibosomal-protein−8157982242663
rpl22generibosomal-protein−8222682694468
rps19generibosomal-protein−8276383042279
rpl2generibosomal-protein−83105845951490
rpl23generibosomal-protein−8461384895282
trnI-CAUgenetranslation-rna−850728514674
ycf2geneother+85234920626828
ycf15geneother+9220392401198
trnL-CAAgenetranslation-rna−926619274281
ndhBgenenad-dehydrogenase−93304955122208
rps7generibosomal-protein−9577796245468
trnV-GACgenetranslation-rna+987559882772
rrn16Sgeneribosomal-rna+990541005441490
trnI-GAUgenetranslation-rna+1008421018611019
trnA-UGCgenetranslation-rna+101947102826879
rrn23Sgeneribosomal-rna+1029921058022810
rrn4.5Sgeneribosomal-rna+105900106003103
rrn5Sgeneribosomal-rna+106255106376121
trnR-ACGgenetranslation-rna+10661910669374
trnN-GUUgenetranslation-rna−10721710729073
ndhFgenenad-dehydrogenase−1086571108712214
rpl32generibosomal-protein+111332111503171
trnL-UAGgenetranslation-rna+11224211232280
ccsAgeneother+112422113400978
ndhDgenenad-dehydrogenase−1136491151521503
psaCgenephotosystem-i−115270115516246
ndhEgenenad-dehydrogenase−115772116078306
ndhGgenenad-dehydrogenase−116310116841531
ndhIgenenad-dehydrogenase−116947117454507
ndhAgenenad-dehydrogenase−1175341196382104
ndhHgenenad-dehydrogenase−1196391208271188
rps15generibosomal-protein−120926121199273
ycf1geneother−1215931258804287
trnN-GUUgenetranslation-rna+12746912754273
trnR-ACGgenetranslation-rna−12806612814074
rrn5Sgeneribosomal-rna−128383128504121
rrn4.5Sgeneribosomal-rna−128756128859103
rrn23Sgeneribosomal-rna−1289571317672810
trnA-UGCgenetranslation-rna−131933132812879
trnI-GAUgenetranslation-rna−1328981339171019
rrn16Sgeneribosomal-rna−1342151357051490
trnV-GACgenetranslation-rna−13593213600472
rps7generibosomal-protein+138514138982468
ndhBgenenad-dehydrogenase+1392471414552208
trnL-CAAgenetranslation-rna+14201714209881
ycf15geneother−142358142556198
ycf2geneother−1426971495256828
trnI-CAUgenetranslation-rna+14961314968774
rpl23generibosomal-protein+149864150146282
rpl2generibosomal-protein+1501641516541490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources