Coordinate-aware organelle record

Mentha aquatica chloroplast genome

Available PV600640.1 152,077 bp 132 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 17-90 bp · − strandpsbA · gene · 398-1,456 bp · − strandtrnK-UUU · gene · 1,676-4,272 bp · − strandmatK · gene · 2,005-3,534 bp · − strandrps16 · gene · 4,800-5,942 bp · − strandtrnQ-UUG · gene · 6,915-6,986 bp · − strandpsbK · gene · 7,367-7,552 bp · + strandpsbI · gene · 7,947-8,057 bp · + strandtrnS-GCU · gene · 8,194-8,281 bp · − strandtrnG-UCC · gene · 8,986-9,743 bp · + strandtrnR-UCU · gene · 9,953-10,024 bp · + strandatpA · gene · 10,133-11,656 bp · − strandatpF · gene · 11,757-13,005 bp · − strandatpH · gene · 13,271-13,516 bp · − strandatpI · gene · 14,510-15,253 bp · − strandrps2 · gene · 15,476-16,186 bp · − strandrpoC2 · gene · 16,408-20,607 bp · − strandrpoC1 · gene · 20,768-23,579 bp · − strandrpoB · gene · 23,606-26,818 bp · − strandtrnC-GCA · gene · 27,940-28,010 bp · + strandpetN · gene · 28,171-28,260 bp · + strandpsbM · gene · 29,219-29,323 bp · − strandtrnD-GUC · gene · 29,847-29,920 bp · − strandtrnY-GUA · gene · 30,031-30,114 bp · − strandtrnE-UUC · gene · 30,196-30,268 bp · − strandtrnT-GGU · gene · 30,823-30,894 bp · + strandpsbD · gene · 32,249-33,310 bp · + strandpsbC · gene · 33,258-34,679 bp · + strandtrnS-UGA · gene · 34,924-35,016 bp · − strandpsbZ · gene · 35,361-35,549 bp · + strandtrnG-GCC · gene · 35,821-35,891 bp · + strandtrnM-CAU · gene · 36,055-36,128 bp · − strandrps14 · gene · 36,278-36,580 bp · − strandpsaB · gene · 36,708-38,912 bp · − strandpsaA · gene · 38,938-41,190 bp · − strandycf3 · gene · 41,919-43,860 bp · − strandtrnS-GGA · gene · 44,719-44,805 bp · + strandrps4 · gene · 45,093-45,698 bp · − strandtrnT-UGU · gene · 46,139-46,211 bp · − strandtrnL-UAA · gene · 46,880-47,460 bp · + strandtrnF-GAA · gene · 47,753-47,825 bp · + strandndhJ · gene · 48,473-48,949 bp · − strandndhK · gene · 49,060-49,737 bp · − strandndhC · gene · 49,789-50,151 bp · − strandtrnV-UAC · gene · 51,078-51,724 bp · − strandtrnM-CAU · gene · 51,905-51,977 bp · + strandatpE · gene · 52,188-52,589 bp · − strandatpB · gene · 52,586-54,076 bp · − strandrbcL · gene · 54,854-56,287 bp · + strandaccD · gene · 57,008-58,489 bp · + strandpsaI · gene · 58,960-59,070 bp · + strandycf4 · gene · 59,517-60,071 bp · + strandcemA · gene · 60,724-61,413 bp · + strandpetA · gene · 61,622-62,584 bp · + strandpsbJ · gene · 63,614-63,736 bp · − strandpsbL · gene · 63,871-63,987 bp · − strandpsbF · gene · 64,011-64,130 bp · − strandpsbE · gene · 64,145-64,396 bp · − strandpetL · gene · 65,274-65,369 bp · + strandpetG · gene · 65,540-65,653 bp · + strandtrnW-CCA · gene · 65,768-65,841 bp · − strandtrnP-UGG · gene · 66,015-66,088 bp · − strandpsaJ · gene · 66,365-66,499 bp · + strandrpl33 · gene · 66,954-67,157 bp · + strandrps18 · gene · 67,322-67,627 bp · + strandrpl20 · gene · 67,861-68,247 bp · − strandrps12 · gene · 69,064-97,255 bp · − strandrps12 · gene · 69,064-138,828 bp · + strandclpP · gene · 69,303-71,235 bp · − strandpsbB · gene · 71,687-73,213 bp · + strandpsbT · gene · 73,402-73,503 bp · + strandpsbN · gene · 73,572-73,703 bp · − strandpsbH · gene · 73,809-74,030 bp · + strandpetB · gene · 74,156-75,531 bp · + strandpetD · gene · 75,719-76,905 bp · + strandrpoA · gene · 77,094-78,101 bp · − strandrps11 · gene · 78,174-78,590 bp · − strandrpl36 · gene · 78,700-78,813 bp · − strandinfA · gene · 78,909-79,142 bp · − strandrps8 · gene · 79,267-79,671 bp · − strandrpl14 · gene · 79,855-80,223 bp · − strandrpl16 · gene · 80,355-81,639 bp · − strandrps3 · gene · 81,784-82,446 bp · − strandrpl22 · gene · 82,431-82,898 bp · − strandrps19 · gene · 82,977-83,255 bp · − strandrpl2 · gene · 83,316-84,805 bp · − strandrpl23 · gene · 84,824-85,105 bp · − strandtrnM-CAU · gene · 85,271-85,344 bp · − strandycf2 · gene · 85,433-92,227 bp · + strandycf15 · gene · 92,369-92,566 bp · + strandtrnL-CAA · gene · 92,827-92,907 bp · − strandndhB · gene · 93,468-95,675 bp · − strandrps7 · gene · 95,941-96,408 bp · − strandtrnV-GAC · gene · 98,898-98,969 bp · + strandrrn16S · gene · 99,196-100,686 bp · + strandtrnI-GAU · gene · 100,985-102,002 bp · + strandtrnA-UGC · gene · 102,072-102,949 bp · + strandrrn23S · gene · 103,115-105,925 bp · + strandrrn4.5S · gene · 106,024-106,126 bp · + strandrrn5S · gene · 106,387-106,507 bp · + strandtrnR-ACG · gene · 106,751-106,824 bp · + strandtrnN-GUU · gene · 107,349-107,420 bp · − strandycf1 · gene · 107,750-113,302 bp · + strandrps15 · gene · 113,713-113,985 bp · + strandndhH · gene · 114,080-115,261 bp · + strandndhA · gene · 115,263-117,366 bp · + strandndhI · gene · 117,442-117,948 bp · + strandndhG · gene · 118,334-118,864 bp · + strandndhE · gene · 119,089-119,394 bp · + strandpsaC · gene · 119,640-119,885 bp · + strandndhD · gene · 119,977-121,506 bp · + strandccsA · gene · 121,741-122,718 bp · − strandtrnL-UAG · gene · 122,820-122,899 bp · − strandrpl32 · gene · 123,642-123,812 bp · − strandndhF · gene · 124,285-126,516 bp · + strandtrnN-GUU · gene · 127,870-127,941 bp · + strandtrnR-ACG · gene · 128,466-128,539 bp · − strandrrn5S · gene · 128,783-128,903 bp · − strandrrn4.5S · gene · 129,164-129,266 bp · − strandrrn23S · gene · 129,365-132,175 bp · − strandtrnA-UGC · gene · 132,341-133,218 bp · − strandtrnI-GAU · gene · 133,288-134,305 bp · − strandrrn16S · gene · 134,604-136,094 bp · − strandtrnV-GAC · gene · 136,321-136,392 bp · − strandrps7 · gene · 138,882-139,349 bp · + strandndhB · gene · 139,615-141,822 bp · + strandtrnL-CAA · gene · 142,383-142,463 bp · + strandycf15 · gene · 142,724-142,921 bp · − strandycf2 · gene · 143,063-149,857 bp · − strandtrnI-CAU · gene · 149,946-150,019 bp · + strandrpl23 · gene · 150,185-150,466 bp · + strandrpl2 · gene · 150,485-151,974 bp · + strandMentha aquaticaANNOTATED PLASTOMEPV600640.1152,077 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PV600640.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−169074
psbAgenephotosystem-ii−39714561059
trnK-UUUgenetranslation-rna−167542722597
matKgeneother−200435341530
rps16generibosomal-protein−479959421143
trnQ-UUGgenetranslation-rna−6914698672
psbKgenephotosystem-ii+73667552186
psbIgenephotosystem-ii+79468057111
trnS-GCUgenetranslation-rna−8193828188
trnG-UCCgenetranslation-rna+89859743758
trnR-UCUgenetranslation-rna+99521002472
atpAgeneatp-synthase−10132116561524
atpFgeneatp-synthase−11756130051249
atpHgeneatp-synthase−1327013516246
atpIgeneatp-synthase−1450915253744
rps2generibosomal-protein−1547516186711
rpoC2generna-polymerase−16407206074200
rpoC1generna-polymerase−20767235792812
rpoBgenerna-polymerase−23605268183213
trnC-GCAgenetranslation-rna+279392801071
petNgenecytochrome+281702826090
psbMgenephotosystem-ii−2921829323105
trnD-GUCgenetranslation-rna−298462992074
trnY-GUAgenetranslation-rna−300303011484
trnE-UUCgenetranslation-rna−301953026873
trnT-GGUgenetranslation-rna+308223089472
psbDgenephotosystem-ii+32248333101062
psbCgenephotosystem-ii+33257346791422
trnS-UGAgenetranslation-rna−349233501693
psbZgenephotosystem-ii+3536035549189
trnG-GCCgenetranslation-rna+358203589171
trnM-CAUgenetranslation-rna−360543612874
rps14generibosomal-protein−3627736580303
psaBgenephotosystem-i−36707389122205
psaAgenephotosystem-i−38937411902253
ycf3geneother−41918438601942
trnS-GGAgenetranslation-rna+447184480587
rps4generibosomal-protein−4509245698606
trnT-UGUgenetranslation-rna−461384621173
trnL-UAAgenetranslation-rna+4687947460581
trnF-GAAgenetranslation-rna+477524782573
ndhJgenenad-dehydrogenase−4847248949477
ndhKgenenad-dehydrogenase−4905949737678
ndhCgenenad-dehydrogenase−4978850151363
trnV-UACgenetranslation-rna−5107751724647
trnM-CAUgenetranslation-rna+519045197773
atpEgeneatp-synthase−5218752589402
atpBgeneatp-synthase−52585540761491
rbcLgeneother+54853562871434
accDgeneother+57007584891482
psaIgenephotosystem-i+5895959070111
ycf4geneother+5951660071555
cemAgeneother+6072361413690
petAgenecytochrome+6162162584963
psbJgenephotosystem-ii−6361363736123
psbLgenephotosystem-ii−6387063987117
psbFgenephotosystem-ii−6401064130120
psbEgenephotosystem-ii−6414464396252
petLgenecytochrome+652736536996
petGgenecytochrome+6553965653114
trnW-CCAgenetranslation-rna−657676584174
trnP-UGGgenetranslation-rna−660146608874
psaJgenephotosystem-i+6636466499135
rpl33generibosomal-protein+6695367157204
rps18generibosomal-protein+6732167627306
rpl20generibosomal-protein−6786068247387
rps12generibosomal-protein−690639725528192
rps12generibosomal-protein+6906313882869765
clpPgeneother−69302712351933
psbBgenephotosystem-ii+71686732131527
psbTgenephotosystem-ii+7340173503102
psbNgenephotosystem-ii−7357173703132
psbHgenephotosystem-ii+7380874030222
petBgenecytochrome+74155755311376
petDgenecytochrome+75718769051187
rpoAgenerna-polymerase−77093781011008
rps11generibosomal-protein−7817378590417
rpl36generibosomal-protein−7869978813114
infAgeneother−7890879142234
rps8generibosomal-protein−7926679671405
rpl14generibosomal-protein−7985480223369
rpl16generibosomal-protein−80354816391285
rps3generibosomal-protein−8178382446663
rpl22generibosomal-protein−8243082898468
rps19generibosomal-protein−8297683255279
rpl2generibosomal-protein−83315848051490
rpl23generibosomal-protein−8482385105282
trnM-CAUgenetranslation-rna−852708534474
ycf2geneother+85432922276795
ycf15geneother+9236892566198
trnL-CAAgenetranslation-rna−928269290781
ndhBgenenad-dehydrogenase−93467956752208
rps7generibosomal-protein−9594096408468
trnV-GACgenetranslation-rna+988979896972
rrn16Sgeneribosomal-rna+991951006861491
trnI-GAUgenetranslation-rna+1009841020021018
trnA-UGCgenetranslation-rna+102071102949878
rrn23Sgeneribosomal-rna+1031141059252811
rrn4.5Sgeneribosomal-rna+106023106126103
rrn5Sgeneribosomal-rna+106386106507121
trnR-ACGgenetranslation-rna+10675010682474
trnN-GUUgenetranslation-rna−10734810742072
ycf1geneother+1077491133025553
rps15generibosomal-protein+113712113985273
ndhHgenenad-dehydrogenase+1140791152611182
ndhAgenenad-dehydrogenase+1152621173662104
ndhIgenenad-dehydrogenase+117441117948507
ndhGgenenad-dehydrogenase+118333118864531
ndhEgenenad-dehydrogenase+119088119394306
psaCgenephotosystem-i+119639119885246
ndhDgenenad-dehydrogenase+1199761215061530
ccsAgeneother−121740122718978
trnL-UAGgenetranslation-rna−12281912289980
rpl32generibosomal-protein−123641123812171
ndhFgenenad-dehydrogenase+1242841265162232
trnN-GUUgenetranslation-rna+12786912794172
trnR-ACGgenetranslation-rna−12846512853974
rrn5Sgeneribosomal-rna−128782128903121
rrn4.5Sgeneribosomal-rna−129163129266103
rrn23Sgeneribosomal-rna−1293641321752811
trnA-UGCgenetranslation-rna−132340133218878
trnI-GAUgenetranslation-rna−1332871343051018
rrn16Sgeneribosomal-rna−1346031360941491
trnV-GACgenetranslation-rna−13632013639272
rps7generibosomal-protein+138881139349468
ndhBgenenad-dehydrogenase+1396141418222208
trnL-CAAgenetranslation-rna+14238214246381
ycf15geneother−142723142921198
ycf2geneother−1430621498576795
trnI-CAUgenetranslation-rna+14994515001974
rpl23generibosomal-protein+150184150466282
rpl2generibosomal-protein+1504841519741490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources