Coordinate-aware organelle record

Mentha sp Snogerup 10996 chloroplast genome

Available PX971241.1 152,131 bp 132 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-84 bp · − strandpsbA · gene · 407-1,465 bp · − strandtrnK-UUU · gene · 1,686-4,281 bp · − strandmatK · gene · 2,014-3,543 bp · − strandrps16 · gene · 4,808-5,949 bp · − strandtrnQ-UUG · gene · 6,924-6,995 bp · − strandpsbK · gene · 7,376-7,561 bp · + strandpsbI · gene · 7,956-8,066 bp · + strandtrnS-GCU · gene · 8,199-8,286 bp · − strandtrnG-UCC · gene · 8,983-9,738 bp · + strandtrnR-UCU · gene · 9,948-10,019 bp · + strandatpA · gene · 10,128-11,651 bp · − strandatpF · gene · 11,745-12,992 bp · − strandatpH · gene · 13,258-13,503 bp · − strandatpI · gene · 14,529-15,272 bp · − strandrps2 · gene · 15,495-16,205 bp · − strandrpoC2 · gene · 16,428-20,627 bp · − strandrpoC1 · gene · 20,788-23,599 bp · − strandrpoB · gene · 23,626-26,838 bp · − strandtrnC-GCA · gene · 27,984-28,054 bp · + strandpetN · gene · 28,215-28,304 bp · + strandpsbM · gene · 29,262-29,366 bp · − strandtrnD-GUC · gene · 29,885-29,958 bp · − strandtrnY-GUA · gene · 30,069-30,152 bp · − strandtrnE-UUC · gene · 30,235-30,307 bp · − strandtrnT-GGU · gene · 30,866-30,937 bp · + strandpsbD · gene · 32,284-33,345 bp · + strandpsbC · gene · 33,293-34,714 bp · + strandtrnS-UGA · gene · 34,972-35,064 bp · − strandpsbZ · gene · 35,409-35,597 bp · + strandtrnG-GCC · gene · 35,869-35,939 bp · + strandtrnM-CAU · gene · 36,100-36,173 bp · − strandrps14 · gene · 36,323-36,625 bp · − strandpsaB · gene · 36,758-38,962 bp · − strandpsaA · gene · 38,988-41,240 bp · − strandycf3 · gene · 42,019-43,961 bp · − strandtrnS-GGA · gene · 44,803-44,889 bp · + strandrps4 · gene · 45,177-45,782 bp · − strandtrnT-UGU · gene · 46,193-46,265 bp · − strandtrnL-UAA · gene · 46,933-47,507 bp · + strandtrnF-GAA · gene · 47,799-47,871 bp · + strandndhJ · gene · 48,516-48,992 bp · − strandndhK · gene · 49,103-49,780 bp · − strandndhC · gene · 49,832-50,194 bp · − strandtrnV-UAC · gene · 51,143-51,785 bp · − strandtrnM-CAU · gene · 51,966-52,038 bp · + strandatpE · gene · 52,249-52,650 bp · − strandatpB · gene · 52,647-54,137 bp · − strandrbcL · gene · 54,923-56,356 bp · + strandaccD · gene · 57,054-58,535 bp · + strandpsaI · gene · 59,000-59,110 bp · + strandycf4 · gene · 59,558-60,112 bp · + strandcemA · gene · 60,770-61,459 bp · + strandpetA · gene · 61,668-62,630 bp · + strandpsbJ · gene · 63,662-63,784 bp · − strandpsbL · gene · 63,919-64,035 bp · − strandpsbF · gene · 64,059-64,178 bp · − strandpsbE · gene · 64,193-64,444 bp · − strandpetL · gene · 65,322-65,417 bp · + strandpetG · gene · 65,588-65,701 bp · + strandtrnW-CCA · gene · 65,816-65,889 bp · − strandtrnP-UGG · gene · 66,070-66,143 bp · − strandpsaJ · gene · 66,428-66,562 bp · + strandrpl33 · gene · 67,017-67,220 bp · + strandrps18 · gene · 67,391-67,696 bp · + strandrpl20 · gene · 67,932-68,318 bp · − strandrps12 · gene · 69,141-97,312 bp · − strandrps12 · gene · 69,141-138,889 bp · + strandclpP · gene · 69,381-71,311 bp · − strandpsbB · gene · 71,763-73,289 bp · + strandpsbT · gene · 73,484-73,585 bp · + strandpsbN · gene · 73,654-73,785 bp · − strandpsbH · gene · 73,891-74,112 bp · + strandpetB · gene · 74,238-75,611 bp · + strandpetD · gene · 75,799-76,985 bp · + strandrpoA · gene · 77,168-78,175 bp · − strandrps11 · gene · 78,247-78,663 bp · − strandrpl36 · gene · 78,773-78,886 bp · − strandinfA · gene · 78,982-79,215 bp · − strandrps8 · gene · 79,340-79,744 bp · − strandrpl14 · gene · 79,929-80,297 bp · − strandrpl16 · gene · 80,429-81,712 bp · − strandrps3 · gene · 81,857-82,519 bp · − strandrpl22 · gene · 82,504-82,971 bp · − strandrps19 · gene · 83,041-83,190 bp · − strandrpl2 · gene · 83,380-84,867 bp · − strandrpl23 · gene · 84,886-85,167 bp · − strandtrnI-CAU · gene · 85,333-85,406 bp · − strandycf2 · gene · 85,495-92,289 bp · + strandycf15 · gene · 92,431-92,628 bp · + strandtrnL-CAA · gene · 92,884-92,964 bp · − strandndhB · gene · 93,525-95,732 bp · − strandrps7 · gene · 95,998-96,465 bp · − strandtrnV-GAC · gene · 98,955-99,026 bp · + strandrrn16S · gene · 99,253-100,743 bp · + strandtrnI-GAU · gene · 101,042-102,059 bp · + strandtrnA-UGC · gene · 102,129-103,006 bp · + strandrrn23S · gene · 103,172-105,982 bp · + strandrrn4.5S · gene · 106,081-106,183 bp · + strandrrn5S · gene · 106,452-106,572 bp · + strandtrnR-ACG · gene · 106,816-106,889 bp · + strandtrnN-GUU · gene · 107,414-107,485 bp · − strandndhF · gene · 108,839-111,070 bp · − strandrpl32 · gene · 111,544-111,714 bp · + strandtrnL-UAG · gene · 112,458-112,537 bp · + strandccsA · gene · 112,639-113,616 bp · + strandndhD · gene · 113,855-115,384 bp · − strandpsaC · gene · 115,477-115,722 bp · − strandndhE · gene · 115,964-116,269 bp · − strandndhG · gene · 116,494-117,024 bp · − strandndhI · gene · 117,405-117,911 bp · − strandndhA · gene · 117,987-120,080 bp · − strandndhH · gene · 120,082-121,263 bp · − strandrps15 · gene · 121,358-121,630 bp · − strandycf1 · gene · 122,044-127,593 bp · − strandtrnN-GUU · gene · 127,923-127,994 bp · + strandtrnR-ACG · gene · 128,519-128,592 bp · − strandrrn5S · gene · 128,836-128,956 bp · − strandrrn4.5S · gene · 129,225-129,327 bp · − strandrrn23S · gene · 129,426-132,236 bp · − strandtrnA-UGC · gene · 132,402-133,279 bp · − strandtrnI-GAU · gene · 133,349-134,366 bp · − strandrrn16S · gene · 134,665-136,155 bp · − strandtrnV-GAC · gene · 136,382-136,453 bp · − strandrps7 · gene · 138,943-139,410 bp · + strandndhB · gene · 139,676-141,883 bp · + strandtrnL-CAA · gene · 142,444-142,524 bp · + strandycf15 · gene · 142,780-142,977 bp · − strandycf2 · gene · 143,119-149,913 bp · − strandtrnI-CAU · gene · 150,002-150,075 bp · + strandrpl23 · gene · 150,241-150,522 bp · + strandrpl2 · gene · 150,541-152,028 bp · + strandMentha sp Snogerup 10996ANNOTATED PLASTOMEPX971241.1152,131 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PX971241.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

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132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108474
psbAgenephotosystem-ii−40614651059
trnK-UUUgenetranslation-rna−168542812596
matKgeneother−201335431530
rps16generibosomal-protein−480759491142
trnQ-UUGgenetranslation-rna−6923699572
psbKgenephotosystem-ii+73757561186
psbIgenephotosystem-ii+79558066111
trnS-GCUgenetranslation-rna−8198828688
trnG-UCCgenetranslation-rna+89829738756
trnR-UCUgenetranslation-rna+99471001972
atpAgeneatp-synthase−10127116511524
atpFgeneatp-synthase−11744129921248
atpHgeneatp-synthase−1325713503246
atpIgeneatp-synthase−1452815272744
rps2generibosomal-protein−1549416205711
rpoC2generna-polymerase−16427206274200
rpoC1generna-polymerase−20787235992812
rpoBgenerna-polymerase−23625268383213
trnC-GCAgenetranslation-rna+279832805471
petNgenecytochrome+282142830490
psbMgenephotosystem-ii−2926129366105
trnD-GUCgenetranslation-rna−298842995874
trnY-GUAgenetranslation-rna−300683015284
trnE-UUCgenetranslation-rna−302343030773
trnT-GGUgenetranslation-rna+308653093772
psbDgenephotosystem-ii+32283333451062
psbCgenephotosystem-ii+33292347141422
trnS-UGAgenetranslation-rna−349713506493
psbZgenephotosystem-ii+3540835597189
trnG-GCCgenetranslation-rna+358683593971
trnM-CAUgenetranslation-rna−360993617374
rps14generibosomal-protein−3632236625303
psaBgenephotosystem-i−36757389622205
psaAgenephotosystem-i−38987412402253
ycf3geneother−42018439611943
trnS-GGAgenetranslation-rna+448024488987
rps4generibosomal-protein−4517645782606
trnT-UGUgenetranslation-rna−461924626573
trnL-UAAgenetranslation-rna+4693247507575
trnF-GAAgenetranslation-rna+477984787173
ndhJgenenad-dehydrogenase−4851548992477
ndhKgenenad-dehydrogenase−4910249780678
ndhCgenenad-dehydrogenase−4983150194363
trnV-UACgenetranslation-rna−5114251785643
trnM-CAUgenetranslation-rna+519655203873
atpEgeneatp-synthase−5224852650402
atpBgeneatp-synthase−52646541371491
rbcLgeneother+54922563561434
accDgeneother+57053585351482
psaIgenephotosystem-i+5899959110111
ycf4geneother+5955760112555
cemAgeneother+6076961459690
petAgenecytochrome+6166762630963
psbJgenephotosystem-ii−6366163784123
psbLgenephotosystem-ii−6391864035117
psbFgenephotosystem-ii−6405864178120
psbEgenephotosystem-ii−6419264444252
petLgenecytochrome+653216541796
petGgenecytochrome+6558765701114
trnW-CCAgenetranslation-rna−658156588974
trnP-UGGgenetranslation-rna−660696614374
psaJgenephotosystem-i+6642766562135
rpl33generibosomal-protein+6701667220204
rps18generibosomal-protein+6739067696306
rpl20generibosomal-protein−6793168318387
rps12generibosomal-protein−691409731228172
rps12generibosomal-protein+6914013888969749
clpPgeneother−69380713111931
psbBgenephotosystem-ii+71762732891527
psbTgenephotosystem-ii+7348373585102
psbNgenephotosystem-ii−7365373785132
psbHgenephotosystem-ii+7389074112222
petBgenecytochrome+74237756111374
petDgenecytochrome+75798769851187
rpoAgenerna-polymerase−77167781751008
rps11generibosomal-protein−7824678663417
rpl36generibosomal-protein−7877278886114
infAgeneother−7898179215234
rps8generibosomal-protein−7933979744405
rpl14generibosomal-protein−7992880297369
rpl16generibosomal-protein−80428817121284
rps3generibosomal-protein−8185682519663
rpl22generibosomal-protein−8250382971468
rps19generibosomal-protein−8304083190150
rpl2generibosomal-protein−83379848671488
rpl23generibosomal-protein−8488585167282
trnI-CAUgenetranslation-rna−853328540674
ycf2geneother+85494922896795
ycf15geneother+9243092628198
trnL-CAAgenetranslation-rna−928839296481
ndhBgenenad-dehydrogenase−93524957322208
rps7generibosomal-protein−9599796465468
trnV-GACgenetranslation-rna+989549902672
rrn16Sgeneribosomal-rna+992521007431491
trnI-GAUgenetranslation-rna+1010411020591018
trnA-UGCgenetranslation-rna+102128103006878
rrn23Sgeneribosomal-rna+1031711059822811
rrn4.5Sgeneribosomal-rna+106080106183103
rrn5Sgeneribosomal-rna+106451106572121
trnR-ACGgenetranslation-rna+10681510688974
trnN-GUUgenetranslation-rna−10741310748572
ndhFgenenad-dehydrogenase−1088381110702232
rpl32generibosomal-protein+111543111714171
trnL-UAGgenetranslation-rna+11245711253780
ccsAgeneother+112638113616978
ndhDgenenad-dehydrogenase−1138541153841530
psaCgenephotosystem-i−115476115722246
ndhEgenenad-dehydrogenase−115963116269306
ndhGgenenad-dehydrogenase−116493117024531
ndhIgenenad-dehydrogenase−117404117911507
ndhAgenenad-dehydrogenase−1179861200802094
ndhHgenenad-dehydrogenase−1200811212631182
rps15generibosomal-protein−121357121630273
ycf1geneother−1220431275935550
trnN-GUUgenetranslation-rna+12792212799472
trnR-ACGgenetranslation-rna−12851812859274
rrn5Sgeneribosomal-rna−128835128956121
rrn4.5Sgeneribosomal-rna−129224129327103
rrn23Sgeneribosomal-rna−1294251322362811
trnA-UGCgenetranslation-rna−132401133279878
trnI-GAUgenetranslation-rna−1333481343661018
rrn16Sgeneribosomal-rna−1346641361551491
trnV-GACgenetranslation-rna−13638113645372
rps7generibosomal-protein+138942139410468
ndhBgenenad-dehydrogenase+1396751418832208
trnL-CAAgenetranslation-rna+14244314252481
ycf15geneother−142779142977198
ycf2geneother−1431181499136795
trnI-CAUgenetranslation-rna+15000115007574
rpl23generibosomal-protein+150240150522282
rpl2generibosomal-protein+1505401520281488

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