Mesosphaerum suaveolens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX969653.1 · 2–75 bp · −
psbA · PX969653.1 · 296–1,354 bp · −
trnK-UUU · PX969653.1 · 1,579–4,162 bp · −
matK · PX969653.1 · 1,900–3,420 bp · −
rps16 · PX969653.1 · 4,697–5,838 bp · −
trnQ-UUG · PX969653.1 · 6,819–6,890 bp · −
trnS-GCU · PX969653.1 · 8,130–8,217 bp · −
atpA · PX969653.1 · 10,144–11,667 bp · −
atpF · PX969653.1 · 11,764–13,006 bp · −
atpH · PX969653.1 · 13,290–13,535 bp · −
atpI · PX969653.1 · 14,494–15,237 bp · −
rps2 · PX969653.1 · 15,462–16,172 bp · −
rpoC2 · PX969653.1 · 16,387–20,568 bp · −
rpoC1 · PX969653.1 · 20,733–23,549 bp · −
rpoB · PX969653.1 · 23,576–26,788 bp · −
psbM · PX969653.1 · 29,324–29,428 bp · −
trnD-GUC · PX969653.1 · 29,943–30,016 bp · −
trnY-GUA · PX969653.1 · 30,127–30,210 bp · −
trnE-UUC · PX969653.1 · 30,288–30,360 bp · −
trnS-UGA · PX969653.1 · 35,057–35,149 bp · −
trnfM-CAU · PX969653.1 · 36,139–36,212 bp · −
rps14 · PX969653.1 · 36,357–36,659 bp · −
psaB · PX969653.1 · 36,782–38,986 bp · −
psaA · PX969653.1 · 39,012–41,264 bp · −
ycf3 · PX969653.1 · 42,046–44,007 bp · −
rps4 · PX969653.1 · 45,251–45,856 bp · −
trnT-UGU · PX969653.1 · 46,253–46,325 bp · −
ndhJ · PX969653.1 · 48,620–49,096 bp · −
ndhK · PX969653.1 · 49,207–49,884 bp · −
ndhC · PX969653.1 · 49,936–50,298 bp · −
trnV-UAC · PX969653.1 · 51,238–51,887 bp · −
atpE · PX969653.1 · 52,360–52,761 bp · −
atpB · PX969653.1 · 52,758–54,254 bp · −
psbJ · PX969653.1 · 64,064–64,186 bp · −
psbL · PX969653.1 · 64,321–64,437 bp · −
psbF · PX969653.1 · 64,461–64,580 bp · −
psbE · PX969653.1 · 64,595–64,846 bp · −
trnW-CCA · PX969653.1 · 66,282–66,355 bp · −
trnP-UGG · PX969653.1 · 66,523–66,596 bp · −
rpl20 · PX969653.1 · 68,391–68,777 bp · −
rps12 · PX969653.1 · 69,506–69,619 bp · −
rps12 · PX969653.1 · 96,892–97,690 bp · −
clpP · PX969653.1 · 69,746–71,654 bp · −
psbN · PX969653.1 · 74,001–74,132 bp · −
rpoA · PX969653.1 · 77,517–78,524 bp · −
rps11 · PX969653.1 · 78,595–79,011 bp · −
rpl36 · PX969653.1 · 79,121–79,234 bp · −
infA · PX969653.1 · 79,330–79,563 bp · −
rps8 · PX969653.1 · 79,692–80,096 bp · −
rpl14 · PX969653.1 · 80,268–80,636 bp · −
rpl16 · PX969653.1 · 80,769–82,034 bp · −
rps3 · PX969653.1 · 82,186–82,848 bp · −
rpl22 · PX969653.1 · 82,833–83,306 bp · −
rps19 · PX969653.1 · 83,371–83,520 bp · −
rpl2 · PX969653.1 · 83,718–85,196 bp · −
rpl23 · PX969653.1 · 85,215–85,496 bp · −
trnI-CAU · PX969653.1 · 85,662–85,735 bp · −
trnL-CAA · PX969653.1 · 93,246–93,326 bp · −
ndhB · PX969653.1 · 93,888–96,095 bp · −
rps7 · PX969653.1 · 96,371–96,838 bp · −
trnN-GUU · PX969653.1 · 107,854–107,925 bp · −
ndhF · PX969653.1 · 109,279–111,510 bp · −
ndhD · PX969653.1 · 114,181–115,710 bp · −
psaC · PX969653.1 · 115,801–116,046 bp · −
ndhE · PX969653.1 · 116,306–116,611 bp · −
ndhG · PX969653.1 · 116,825–117,355 bp · −
ndhI · PX969653.1 · 117,721–118,227 bp · −
ndhA · PX969653.1 · 118,303–120,399 bp · −
ndhH · PX969653.1 · 120,401–121,582 bp · −
rps15 · PX969653.1 · 121,709–121,981 bp · −
ycf1 · PX969653.1 · 122,399–127,885 bp · −
trnR-ACG · PX969653.1 · 128,880–128,953 bp · −
rrn5S · PX969653.1 · 129,197–129,317 bp · −
rrn4.5S · PX969653.1 · 129,573–129,675 bp · −
rrn23S · PX969653.1 · 129,774–132,584 bp · −
trnA-UGC · PX969653.1 · 132,756–133,634 bp · −
trnI-GAU · PX969653.1 · 133,699–134,717 bp · −
rrn16S · PX969653.1 · 135,015–136,505 bp · −
trnV-GAC · PX969653.1 · 136,732–136,803 bp · −
ycf15 · PX969653.1 · 143,162–143,359 bp · −
ycf2 · PX969653.1 · 143,501–149,812 bp · −
psbK · PX969653.1 · 7,283–7,462 bp · +
psbI · PX969653.1 · 7,860–7,970 bp · +
trnG-UCC · PX969653.1 · 9,033–9,776 bp · +
trnR-UCU · PX969653.1 · 9,969–10,040 bp · +
trnC-GCA · PX969653.1 · 28,002–28,072 bp · +
petN · PX969653.1 · 28,238–28,327 bp · +
trnT-GGU · PX969653.1 · 30,956–31,027 bp · +
psbD · PX969653.1 · 32,390–33,451 bp · +
psbC · PX969653.1 · 33,399–34,820 bp · +
psbZ · PX969653.1 · 35,475–35,663 bp · +
trnG-GCC · PX969653.1 · 35,897–35,967 bp · +
trnS-GGA · PX969653.1 · 44,876–44,962 bp · +
trnL-UAA · PX969653.1 · 47,026–47,574 bp · +
trnF-GAA · PX969653.1 · 47,879–47,951 bp · +
trnM-CAU · PX969653.1 · 52,068–52,140 bp · +
rbcL · PX969653.1 · 55,051–56,484 bp · +
accD · PX969653.1 · 57,183–58,655 bp · +
psaI · PX969653.1 · 59,432–59,542 bp · +
ycf4 · PX969653.1 · 59,987–60,541 bp · +
cemA · PX969653.1 · 61,194–61,883 bp · +
petA · PX969653.1 · 62,086–63,048 bp · +
petL · PX969653.1 · 65,773–65,868 bp · +
petG · PX969653.1 · 66,039–66,152 bp · +
psaJ · PX969653.1 · 66,882–67,016 bp · +
rpl33 · PX969653.1 · 67,479–67,679 bp · +
rps18 · PX969653.1 · 67,840–68,145 bp · +
rps12 · PX969653.1 · 138,462–139,260 bp · +
psbB · PX969653.1 · 72,127–73,653 bp · +
psbT · PX969653.1 · 73,834–73,935 bp · +
psbH · PX969653.1 · 74,238–74,456 bp · +
petB · PX969653.1 · 74,591–75,962 bp · +
petD · PX969653.1 · 76,151–77,340 bp · +
ycf2 · PX969653.1 · 86,340–92,651 bp · +
ycf15 · PX969653.1 · 92,793–92,990 bp · +
trnV-GAC · PX969653.1 · 99,349–99,420 bp · +
rrn16S · PX969653.1 · 99,647–101,137 bp · +
trnI-GAU · PX969653.1 · 101,435–102,453 bp · +
trnA-UGC · PX969653.1 · 102,518–103,396 bp · +
rrn23S · PX969653.1 · 103,568–106,378 bp · +
rrn4.5S · PX969653.1 · 106,477–106,579 bp · +
rrn5S · PX969653.1 · 106,835–106,955 bp · +
trnR-ACG · PX969653.1 · 107,199–107,272 bp · +
rpl32 · PX969653.1 · 111,997–112,167 bp · +
trnL-UAG · PX969653.1 · 112,813–112,892 bp · +
ccsA · PX969653.1 · 112,983–113,954 bp · +
trnN-GUU · PX969653.1 · 128,227–128,298 bp · +
rps7 · PX969653.1 · 139,314–139,781 bp · +
ndhB · PX969653.1 · 140,057–142,264 bp · +
trnL-CAA · PX969653.1 · 142,826–142,906 bp · +
trnI-CAU · PX969653.1 · 150,417–150,490 bp · +
rpl23 · PX969653.1 · 150,656–150,937 bp · +
rpl2 · PX969653.1 · 150,956–152,434 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Mesosphaerum suaveolens
ANNOTATED PLASTOME
PX969653.1
152,555 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38139 76278 114416 152555 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 296 1354 1059 Locate
trnK-UUU gene − 1579 4162 2584 Locate
matK gene − 1900 3420 1521 Locate
rps16 gene − 4697 5838 1142 Locate
trnQ-UUG gene − 6819 6890 72 Locate
psbK gene + 7283 7462 180 Locate
psbI gene + 7860 7970 111 Locate
trnS-GCU gene − 8130 8217 88 Locate
trnG-UCC gene + 9033 9776 744 Locate
trnR-UCU gene + 9969 10040 72 Locate
atpA gene − 10144 11667 1524 Locate
atpF gene − 11764 13006 1243 Locate
atpH gene − 13290 13535 246 Locate
atpI gene − 14494 15237 744 Locate
rps2 gene − 15462 16172 711 Locate
rpoC2 gene − 16387 20568 4182 Locate
rpoC1 gene − 20733 23549 2817 Locate
rpoB gene − 23576 26788 3213 Locate
trnC-GCA gene + 28002 28072 71 Locate
petN gene + 28238 28327 90 Locate
psbM gene − 29324 29428 105 Locate
trnD-GUC gene − 29943 30016 74 Locate
trnY-GUA gene − 30127 30210 84 Locate
trnE-UUC gene − 30288 30360 73 Locate
trnT-GGU gene + 30956 31027 72 Locate
psbD gene + 32390 33451 1062 Locate
psbC gene + 33399 34820 1422 Locate
trnS-UGA gene − 35057 35149 93 Locate
psbZ gene + 35475 35663 189 Locate
trnG-GCC gene + 35897 35967 71 Locate
trnfM-CAU gene − 36139 36212 74 Locate
rps14 gene − 36357 36659 303 Locate
psaB gene − 36782 38986 2205 Locate
psaA gene − 39012 41264 2253 Locate
ycf3 gene − 42046 44007 1962 Locate
trnS-GGA gene + 44876 44962 87 Locate
rps4 gene − 45251 45856 606 Locate
trnT-UGU gene − 46253 46325 73 Locate
trnL-UAA gene + 47026 47574 549 Locate
trnF-GAA gene + 47879 47951 73 Locate
ndhJ gene − 48620 49096 477 Locate
ndhK gene − 49207 49884 678 Locate
ndhC gene − 49936 50298 363 Locate
trnV-UAC gene − 51238 51887 650 Locate
trnM-CAU gene + 52068 52140 73 Locate
atpE gene − 52360 52761 402 Locate
atpB gene − 52758 54254 1497 Locate
rbcL gene + 55051 56484 1434 Locate
accD gene + 57183 58655 1473 Locate
psaI gene + 59432 59542 111 Locate
ycf4 gene + 59987 60541 555 Locate
cemA gene + 61194 61883 690 Locate
petA gene + 62086 63048 963 Locate
psbJ gene − 64064 64186 123 Locate
psbL gene − 64321 64437 117 Locate
psbF gene − 64461 64580 120 Locate
psbE gene − 64595 64846 252 Locate
petL gene + 65773 65868 96 Locate
petG gene + 66039 66152 114 Locate
trnW-CCA gene − 66282 66355 74 Locate
trnP-UGG gene − 66523 66596 74 Locate
psaJ gene + 66882 67016 135 Locate
rpl33 gene + 67479 67679 201 Locate
rps18 gene + 67840 68145 306 Locate
rpl20 gene − 68391 68777 387 Locate
rps12 gene − 69506 69619 114 Locate
clpP gene − 69746 71654 1909 Locate
psbB gene + 72127 73653 1527 Locate
psbT gene + 73834 73935 102 Locate
psbN gene − 74001 74132 132 Locate
psbH gene + 74238 74456 219 Locate
petB gene + 74591 75962 1372 Locate
petD gene + 76151 77340 1190 Locate
rpoA gene − 77517 78524 1008 Locate
rps11 gene − 78595 79011 417 Locate
rpl36 gene − 79121 79234 114 Locate
infA gene − 79330 79563 234 Locate
rps8 gene − 79692 80096 405 Locate
rpl14 gene − 80268 80636 369 Locate
rpl16 gene − 80769 82034 1266 Locate
rps3 gene − 82186 82848 663 Locate
rpl22 gene − 82833 83306 474 Locate
rps19 gene − 83371 83520 150 Locate
rpl2 gene − 83718 85196 1479 Locate
rpl23 gene − 85215 85496 282 Locate
trnI-CAU gene − 85662 85735 74 Locate
ycf2 gene + 86340 92651 6312 Locate
ycf15 gene + 92793 92990 198 Locate
trnL-CAA gene − 93246 93326 81 Locate
ndhB gene − 93888 96095 2208 Locate
rps7 gene − 96371 96838 468 Locate
rps12 gene − 96892 97690 799 Locate
trnV-GAC gene + 99349 99420 72 Locate
rrn16S gene + 99647 101137 1491 Locate
trnI-GAU gene + 101435 102453 1019 Locate
trnA-UGC gene + 102518 103396 879 Locate
rrn23S gene + 103568 106378 2811 Locate
rrn4.5S gene + 106477 106579 103 Locate
rrn5S gene + 106835 106955 121 Locate
trnR-ACG gene + 107199 107272 74 Locate
trnN-GUU gene − 107854 107925 72 Locate
ndhF gene − 109279 111510 2232 Locate
rpl32 gene + 111997 112167 171 Locate
trnL-UAG gene + 112813 112892 80 Locate
ccsA gene + 112983 113954 972 Locate
ndhD gene − 114181 115710 1530 Locate
psaC gene − 115801 116046 246 Locate
ndhE gene − 116306 116611 306 Locate
ndhG gene − 116825 117355 531 Locate
ndhI gene − 117721 118227 507 Locate
ndhA gene − 118303 120399 2097 Locate
ndhH gene − 120401 121582 1182 Locate
rps15 gene − 121709 121981 273 Locate
ycf1 gene − 122399 127885 5487 Locate
trnN-GUU gene + 128227 128298 72 Locate
trnR-ACG gene − 128880 128953 74 Locate
rrn5S gene − 129197 129317 121 Locate
rrn4.5S gene − 129573 129675 103 Locate
rrn23S gene − 129774 132584 2811 Locate
trnA-UGC gene − 132756 133634 879 Locate
trnI-GAU gene − 133699 134717 1019 Locate
rrn16S gene − 135015 136505 1491 Locate
trnV-GAC gene − 136732 136803 72 Locate
rps12 gene + 138462 139260 799 Locate
rps7 gene + 139314 139781 468 Locate
ndhB gene + 140057 142264 2208 Locate
trnL-CAA gene + 142826 142906 81 Locate
ycf15 gene − 143162 143359 198 Locate
ycf2 gene − 143501 149812 6312 Locate
trnI-CAU gene + 150417 150490 74 Locate
rpl23 gene + 150656 150937 282 Locate
rpl2 gene + 150956 152434 1479 Locate
Status Available
Accession PX969653.1
Length 152,555 bp
GC content 37.7%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources