Coordinate-aware organelle record

Monarda didyma chloroplast genome

Available PX394257.1 151,812 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1654	4252	2598
matK	gene	other	−	1978	3508	1530
rps16	gene	ribosomal-protein	−	4776	5913	1137
trnQ-UUG	gene	translation-rna	−	6855	6927	72
psbK	gene	photosystem-ii	+	7307	7493	186
psbI	gene	photosystem-ii	+	7904	8015	111
trnS-GCU	gene	translation-rna	−	8169	8257	88
trnG-UCC	gene	translation-rna	+	8979	9736	757
trnR-UCU	gene	translation-rna	+	9922	9994	72
atpA	gene	atp-synthase	−	10102	11626	1524
atpF	gene	atp-synthase	−	11726	12984	1258
atpH	gene	atp-synthase	−	13256	13502	246
atpI	gene	atp-synthase	−	14525	15269	744
rps2	gene	ribosomal-protein	−	15488	16199	711
rpoC2	gene	rna-polymerase	−	16427	20627	4200
rpoC1	gene	rna-polymerase	−	20787	23599	2812
rpoB	gene	rna-polymerase	−	23625	26838	3213
trnC-GCA	gene	translation-rna	+	27987	28058	71
petN	gene	cytochrome	+	28218	28308	90
psbM	gene	photosystem-ii	−	29265	29370	105
trnD-GUC	gene	translation-rna	−	29888	29962	74
trnY-GUA	gene	translation-rna	−	30079	30163	84
trnE-UUC	gene	translation-rna	−	30238	30311	73
trnT-GGU	gene	translation-rna	+	30867	30939	72
psbD	gene	photosystem-ii	+	32289	33351	1062
psbC	gene	photosystem-ii	+	33298	34720	1422
trnS-UGA	gene	translation-rna	−	34972	35065	93
psbZ	gene	photosystem-ii	+	35404	35593	189
trnG-GCC	gene	translation-rna	+	35864	35935	71
trnM-CAU	gene	translation-rna	−	36098	36172	74
rps14	gene	ribosomal-protein	−	36321	36624	303
psaB	gene	photosystem-i	−	36746	38951	2205
psaA	gene	photosystem-i	−	38976	41229	2253
ycf3	gene	other	−	42017	43954	1937
trnS-GGA	gene	translation-rna	+	44639	44726	87
rps4	gene	ribosomal-protein	−	45007	45613	606
trnT-UGU	gene	translation-rna	−	45997	46070	73
trnL-UAA	gene	translation-rna	+	46742	47335	593
trnF-GAA	gene	translation-rna	+	47617	47690	73
ndhJ	gene	nad-dehydrogenase	−	48324	48801	477
ndhK	gene	nad-dehydrogenase	−	48911	49589	678
ndhC	gene	nad-dehydrogenase	−	49640	50003	363
trnV-UAC	gene	translation-rna	−	50955	51601	646
trnM-CAU	gene	translation-rna	+	51781	51854	73
atpE	gene	atp-synthase	−	52049	52451	402
atpB	gene	atp-synthase	−	52447	53938	1491
rbcL	gene	other	+	54729	56163	1434
accD	gene	other	+	56859	58341	1482
psaI	gene	photosystem-i	+	58822	58933	111
ycf4	gene	other	+	59378	59933	555
cemA	gene	other	+	60585	61275	690
petA	gene	cytochrome	+	61505	62468	963
psbJ	gene	photosystem-ii	−	63492	63615	123
psbL	gene	photosystem-ii	−	63749	63866	117
psbF	gene	photosystem-ii	−	63889	64009	120
psbE	gene	photosystem-ii	−	64023	64275	252
petL	gene	cytochrome	+	65151	65247	96
petG	gene	cytochrome	+	65417	65531	114
trnW-CCA	gene	translation-rna	−	65645	65719	74
trnP-UGG	gene	translation-rna	−	65892	65966	74
psaJ	gene	photosystem-i	+	66239	66374	135
rpl33	gene	ribosomal-protein	+	66827	67031	204
rps18	gene	ribosomal-protein	+	67200	67506	306
rpl20	gene	ribosomal-protein	−	67690	68077	387
rps12	gene	ribosomal-protein	−	68892	97044	28152
rps12	gene	ribosomal-protein	+	68892	138587	69695
clpP	gene	other	−	69129	71063	1934
psbB	gene	photosystem-ii	+	71514	73041	1527
psbT	gene	photosystem-ii	+	73231	73333	102
psbN	gene	photosystem-ii	−	73401	73533	132
psbH	gene	photosystem-ii	+	73638	73860	222
petB	gene	cytochrome	+	73981	75354	1373
petD	gene	cytochrome	+	75541	76720	1179
rpoA	gene	rna-polymerase	−	76911	77919	1008
rps11	gene	ribosomal-protein	−	77995	78412	417
rpl36	gene	ribosomal-protein	−	78522	78636	114
infA	gene	other	−	78731	78965	234
rps8	gene	ribosomal-protein	−	79088	79493	405
rpl14	gene	ribosomal-protein	−	79675	80044	369
rpl16	gene	ribosomal-protein	−	80175	81451	1276
rps3	gene	ribosomal-protein	−	81595	82258	663
rpl22	gene	ribosomal-protein	−	82242	82710	468
rps19	gene	ribosomal-protein	−	82789	83068	279
rpl2	gene	ribosomal-protein	−	83127	84617	1490
rpl23	gene	ribosomal-protein	−	84635	84917	282
trnI-CAU	gene	translation-rna	−	85082	85156	74
ycf2	gene	other	+	85244	92021	6777
ycf15	gene	other	+	92162	92360	198
trnL-CAA	gene	translation-rna	−	92615	92696	81
ndhB	gene	nad-dehydrogenase	−	93256	95464	2208
rps7	gene	ribosomal-protein	−	95729	96197	468
trnV-GAC	gene	translation-rna	+	98675	98747	72
rrn16S	gene	ribosomal-rna	+	98973	100464	1491
trnI-GAU	gene	translation-rna	+	100762	101782	1020
trnA-UGC	gene	translation-rna	+	101852	102730	878
rrn23S	gene	ribosomal-rna	+	102900	105711	2811
rrn4.5S	gene	ribosomal-rna	+	105809	105912	103
rrn5S	gene	ribosomal-rna	+	106172	106293	121
trnR-ACG	gene	translation-rna	+	106536	106610	74
trnN-GUU	gene	translation-rna	−	107134	107206	72
ndhF	gene	nad-dehydrogenase	−	108559	110791	2232
rpl32	gene	ribosomal-protein	+	111264	111435	171
trnL-UAG	gene	translation-rna	+	112159	112239	80
ccsA	gene	other	+	112339	113317	978
ndhD	gene	nad-dehydrogenase	−	113554	115084	1530
psaC	gene	photosystem-i	−	115176	115422	246
ndhE	gene	nad-dehydrogenase	−	115674	115980	306
ndhG	gene	nad-dehydrogenase	−	116203	116734	531
ndhI	gene	nad-dehydrogenase	−	117108	117615	507
ndhA	gene	nad-dehydrogenase	−	117690	119794	2104
ndhH	gene	nad-dehydrogenase	−	119795	120977	1182
rps15	gene	ribosomal-protein	−	121076	121349	273
ycf1	gene	other	−	121767	127302	5535
trnN-GUU	gene	translation-rna	+	127631	127703	72
trnR-ACG	gene	translation-rna	−	128227	128301	74
rrn5S	gene	ribosomal-rna	−	128544	128665	121
rrn4.5S	gene	ribosomal-rna	−	128925	129028	103
rrn23S	gene	ribosomal-rna	−	129126	131937	2811
trnA-UGC	gene	translation-rna	−	132107	132985	878
trnI-GAU	gene	translation-rna	−	133055	134075	1020
rrn16S	gene	ribosomal-rna	−	134373	135864	1491
trnV-GAC	gene	translation-rna	−	136090	136162	72
rps7	gene	ribosomal-protein	+	138640	139108	468
ndhB	gene	nad-dehydrogenase	+	139373	141581	2208
trnL-CAA	gene	translation-rna	+	142141	142222	81
ycf15	gene	other	−	142477	142675	198
ycf2	gene	other	−	142816	149593	6777
trnI-CAU	gene	translation-rna	+	149681	149755	74
rpl23	gene	ribosomal-protein	+	149920	150202	282
rpl2	gene	ribosomal-protein	+	150220	151710	1490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePX394257.1DNA · accDPX394257DNA · atpBPX394257DNA · matKPX394257DNA · ndhFPX394257DNA · psbAPX394257DNA · rbcLPX394257DNA · rps12PX394257DNA · ycf1PX394257