Ocimum basilicum var. basilicum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · OQ706275.1 · 14–88 bp · −
psbA · OQ706275.1 · 385–1,443 bp · −
trnK-UUU · OQ706275.1 · 1,675–4,251 bp · −
matK · OQ706275.1 · 2,000–3,520 bp · −
rps16 · OQ706275.1 · 4,789–5,915 bp · −
trnQ-UUG · OQ706275.1 · 6,829–6,900 bp · −
trnS-GCU · OQ706275.1 · 8,123–8,210 bp · −
atpA · OQ706275.1 · 10,070–11,593 bp · −
atpF · OQ706275.1 · 11,701–12,940 bp · −
atpH · OQ706275.1 · 13,229–13,474 bp · −
atpI · OQ706275.1 · 14,485–15,228 bp · −
rps2 · OQ706275.1 · 15,454–16,164 bp · −
rpoC2 · OQ706275.1 · 16,382–20,539 bp · −
rpoC1 · OQ706275.1 · 20,716–23,545 bp · −
rpoB · OQ706275.1 · 23,572–26,784 bp · −
psbM · OQ706275.1 · 29,323–29,427 bp · −
trnD-GUC · OQ706275.1 · 29,946–30,019 bp · −
trnY-GUA · OQ706275.1 · 30,136–30,219 bp · −
trnE-UUC · OQ706275.1 · 30,290–30,362 bp · −
trnS-UGA · OQ706275.1 · 34,981–35,073 bp · −
trnfM-CAU · OQ706275.1 · 36,071–36,144 bp · −
rps14 · OQ706275.1 · 36,289–36,591 bp · −
psaB · OQ706275.1 · 36,714–38,918 bp · −
psaA · OQ706275.1 · 38,944–41,196 bp · −
ycf3 · OQ706275.1 · 41,995–43,962 bp · −
rps4 · OQ706275.1 · 45,183–45,788 bp · −
trnT-UGU · OQ706275.1 · 46,177–46,249 bp · −
ndhJ · OQ706275.1 · 48,538–49,014 bp · −
ndhK · OQ706275.1 · 49,125–49,802 bp · −
ndhC · OQ706275.1 · 49,854–50,216 bp · −
trnV-UAC · OQ706275.1 · 51,142–51,793 bp · −
atpE · OQ706275.1 · 52,237–52,638 bp · −
atpB · OQ706275.1 · 52,635–54,131 bp · −
psbJ · OQ706275.1 · 63,922–64,044 bp · −
psbL · OQ706275.1 · 64,179–64,295 bp · −
psbF · OQ706275.1 · 64,319–64,438 bp · −
psbE · OQ706275.1 · 64,453–64,704 bp · −
trnW-CCA · OQ706275.1 · 66,086–66,159 bp · −
trnP-UGG · OQ706275.1 · 66,328–66,401 bp · −
rpl20 · OQ706275.1 · 68,156–68,542 bp · −
rps12 · OQ706275.1 · 69,278–69,391 bp · −
rps12 · OQ706275.1 · 96,678–97,471 bp · −
clpP · OQ706275.1 · 69,532–71,447 bp · −
psbN · OQ706275.1 · 73,786–73,917 bp · −
rpoA · OQ706275.1 · 77,312–78,319 bp · −
rps11 · OQ706275.1 · 78,389–78,805 bp · −
rpl36 · OQ706275.1 · 78,915–79,028 bp · −
infA · OQ706275.1 · 79,124–79,357 bp · −
rps8 · OQ706275.1 · 79,486–79,890 bp · −
rpl14 · OQ706275.1 · 80,061–80,429 bp · −
rpl16 · OQ706275.1 · 80,561–81,826 bp · −
rps3 · OQ706275.1 · 81,970–82,632 bp · −
rpl22 · OQ706275.1 · 82,617–83,090 bp · −
rps19 · OQ706275.1 · 83,172–83,450 bp · −
rpl2 · OQ706275.1 · 83,517–84,995 bp · −
rpl23 · OQ706275.1 · 85,014–85,295 bp · −
trnI-CAU · OQ706275.1 · 85,461–85,534 bp · −
trnL-CAA · OQ706275.1 · 93,044–93,124 bp · −
ndhB · OQ706275.1 · 93,696–95,903 bp · −
rps7 · OQ706275.1 · 96,157–96,624 bp · −
trnN-GUU · OQ706275.1 · 107,616–107,687 bp · −
ndhF · OQ706275.1 · 109,053–111,284 bp · −
ndhD · OQ706275.1 · 114,024–115,526 bp · −
psaC · OQ706275.1 · 115,644–115,889 bp · −
ndhE · OQ706275.1 · 116,150–116,455 bp · −
ndhG · OQ706275.1 · 116,664–117,194 bp · −
ndhI · OQ706275.1 · 117,557–118,063 bp · −
ndhA · OQ706275.1 · 118,144–120,241 bp · −
ndhH · OQ706275.1 · 120,243–121,424 bp · −
rps15 · OQ706275.1 · 121,539–121,811 bp · −
ycf1 · OQ706275.1 · 122,254–127,788 bp · −
trnR-ACG · OQ706275.1 · 128,774–128,847 bp · −
rrn5S · OQ706275.1 · 129,091–129,211 bp · −
rrn4.5S · OQ706275.1 · 129,467–129,569 bp · −
rrn23S · OQ706275.1 · 129,668–132,478 bp · −
trnA-UGC · OQ706275.1 · 132,643–133,521 bp · −
trnI-GAU · OQ706275.1 · 134,516–134,603 bp · −
rrn16S · OQ706275.1 · 134,901–136,391 bp · −
trnV-GAC · OQ706275.1 · 136,612–136,683 bp · −
ycf15 · OQ706275.1 · 143,028–143,225 bp · −
ycf2 · OQ706275.1 · 143,367–150,188 bp · −
psbK · OQ706275.1 · 7,281–7,460 bp · +
psbI · OQ706275.1 · 7,851–7,961 bp · +
trnG-UCC · OQ706275.1 · 8,949–9,708 bp · +
trnR-UCU · OQ706275.1 · 9,895–9,966 bp · +
trnC-GCA · OQ706275.1 · 28,013–28,083 bp · +
petN · OQ706275.1 · 28,246–28,335 bp · +
trnT-GGU · OQ706275.1 · 30,983–31,054 bp · +
psbD · OQ706275.1 · 32,315–33,376 bp · +
psbC · OQ706275.1 · 33,324–34,745 bp · +
psbZ · OQ706275.1 · 35,407–35,595 bp · +
trnG-GCC · OQ706275.1 · 35,840–35,910 bp · +
trnS-GGA · OQ706275.1 · 44,802–44,888 bp · +
trnL-UAA · OQ706275.1 · 46,949–47,508 bp · +
trnF-GAA · OQ706275.1 · 47,791–47,863 bp · +
trnM-CAU · OQ706275.1 · 51,974–52,046 bp · +
rbcL · OQ706275.1 · 54,916–56,349 bp · +
accD · OQ706275.1 · 56,973–58,523 bp · +
psaI · OQ706275.1 · 59,255–59,365 bp · +
ycf4 · OQ706275.1 · 59,815–60,369 bp · +
cemA · OQ706275.1 · 61,016–61,705 bp · +
petA · OQ706275.1 · 61,913–62,875 bp · +
petL · OQ706275.1 · 65,586–65,681 bp · +
petG · OQ706275.1 · 65,850–65,963 bp · +
psaJ · OQ706275.1 · 66,683–66,817 bp · +
rpl33 · OQ706275.1 · 67,261–67,461 bp · +
rps18 · OQ706275.1 · 67,622–67,927 bp · +
rps12 · OQ706275.1 · 138,346–139,139 bp · +
psbB · OQ706275.1 · 71,904–73,430 bp · +
psbT · OQ706275.1 · 73,619–73,720 bp · +
psbH · OQ706275.1 · 74,023–74,241 bp · +
petB · OQ706275.1 · 74,376–75,745 bp · +
petD · OQ706275.1 · 75,934–77,140 bp · +
ycf2 · OQ706275.1 · 85,629–92,450 bp · +
ycf15 · OQ706275.1 · 92,592–92,789 bp · +
trnV-GAC · OQ706275.1 · 99,134–99,205 bp · +
rrn16S · OQ706275.1 · 99,426–100,916 bp · +
trnI-GAU · OQ706275.1 · 101,214–101,301 bp · +
trnA-UGC · OQ706275.1 · 102,296–103,174 bp · +
rrn23S · OQ706275.1 · 103,339–106,149 bp · +
rrn4.5S · OQ706275.1 · 106,248–106,350 bp · +
rrn5S · OQ706275.1 · 106,606–106,726 bp · +
trnR-ACG · OQ706275.1 · 106,970–107,043 bp · +
ycf1 · OQ706275.1 · 108,029–109,159 bp · +
rpl32 · OQ706275.1 · 111,762–111,932 bp · +
trnL-UAG · OQ706275.1 · 112,659–112,738 bp · +
ccsA · OQ706275.1 · 112,828–113,799 bp · +
trnN-GUU · OQ706275.1 · 128,130–128,201 bp · +
rps7 · OQ706275.1 · 139,193–139,660 bp · +
ndhB · OQ706275.1 · 139,914–142,121 bp · +
trnL-CAA · OQ706275.1 · 142,693–142,773 bp · +
trnI-CAU · OQ706275.1 · 150,283–150,356 bp · +
rpl23 · OQ706275.1 · 150,522–150,803 bp · +
rpl2 · OQ706275.1 · 150,822–152,300 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Ocimum basilicum var. basilicum
ANNOTATED PLASTOME
OQ706275.1
152,407 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38102 76204 114305 152407 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 14 88 75 Locate
psbA gene − 385 1443 1059 Locate
trnK-UUU gene − 1675 4251 2577 Locate
matK gene − 2000 3520 1521 Locate
rps16 gene − 4789 5915 1127 Locate
trnQ-UUG gene − 6829 6900 72 Locate
psbK gene + 7281 7460 180 Locate
psbI gene + 7851 7961 111 Locate
trnS-GCU gene − 8123 8210 88 Locate
trnG-UCC gene + 8949 9708 760 Locate
trnR-UCU gene + 9895 9966 72 Locate
atpA gene − 10070 11593 1524 Locate
atpF gene − 11701 12940 1240 Locate
atpH gene − 13229 13474 246 Locate
atpI gene − 14485 15228 744 Locate
rps2 gene − 15454 16164 711 Locate
rpoC2 gene − 16382 20539 4158 Locate
rpoC1 gene − 20716 23545 2830 Locate
rpoB gene − 23572 26784 3213 Locate
trnC-GCA gene + 28013 28083 71 Locate
petN gene + 28246 28335 90 Locate
psbM gene − 29323 29427 105 Locate
trnD-GUC gene − 29946 30019 74 Locate
trnY-GUA gene − 30136 30219 84 Locate
trnE-UUC gene − 30290 30362 73 Locate
trnT-GGU gene + 30983 31054 72 Locate
psbD gene + 32315 33376 1062 Locate
psbC gene + 33324 34745 1422 Locate
trnS-UGA gene − 34981 35073 93 Locate
psbZ gene + 35407 35595 189 Locate
trnG-GCC gene + 35840 35910 71 Locate
trnfM-CAU gene − 36071 36144 74 Locate
rps14 gene − 36289 36591 303 Locate
psaB gene − 36714 38918 2205 Locate
psaA gene − 38944 41196 2253 Locate
ycf3 gene − 41995 43962 1968 Locate
trnS-GGA gene + 44802 44888 87 Locate
rps4 gene − 45183 45788 606 Locate
trnT-UGU gene − 46177 46249 73 Locate
trnL-UAA gene + 46949 47508 560 Locate
trnF-GAA gene + 47791 47863 73 Locate
ndhJ gene − 48538 49014 477 Locate
ndhK gene − 49125 49802 678 Locate
ndhC gene − 49854 50216 363 Locate
trnV-UAC gene − 51142 51793 652 Locate
trnM-CAU gene + 51974 52046 73 Locate
atpE gene − 52237 52638 402 Locate
atpB gene − 52635 54131 1497 Locate
rbcL gene + 54916 56349 1434 Locate
accD gene + 56973 58523 1551 Locate
psaI gene + 59255 59365 111 Locate
ycf4 gene + 59815 60369 555 Locate
cemA gene + 61016 61705 690 Locate
petA gene + 61913 62875 963 Locate
psbJ gene − 63922 64044 123 Locate
psbL gene − 64179 64295 117 Locate
psbF gene − 64319 64438 120 Locate
psbE gene − 64453 64704 252 Locate
petL gene + 65586 65681 96 Locate
petG gene + 65850 65963 114 Locate
trnW-CCA gene − 66086 66159 74 Locate
trnP-UGG gene − 66328 66401 74 Locate
psaJ gene + 66683 66817 135 Locate
rpl33 gene + 67261 67461 201 Locate
rps18 gene + 67622 67927 306 Locate
rpl20 gene − 68156 68542 387 Locate
rps12 gene − 69278 69391 114 Locate
clpP gene − 69532 71447 1916 Locate
psbB gene + 71904 73430 1527 Locate
psbT gene + 73619 73720 102 Locate
psbN gene − 73786 73917 132 Locate
psbH gene + 74023 74241 219 Locate
petB gene + 74376 75745 1370 Locate
petD gene + 75934 77140 1207 Locate
rpoA gene − 77312 78319 1008 Locate
rps11 gene − 78389 78805 417 Locate
rpl36 gene − 78915 79028 114 Locate
infA gene − 79124 79357 234 Locate
rps8 gene − 79486 79890 405 Locate
rpl14 gene − 80061 80429 369 Locate
rpl16 gene − 80561 81826 1266 Locate
rps3 gene − 81970 82632 663 Locate
rpl22 gene − 82617 83090 474 Locate
rps19 gene − 83172 83450 279 Locate
rpl2 gene − 83517 84995 1479 Locate
rpl23 gene − 85014 85295 282 Locate
trnI-CAU gene − 85461 85534 74 Locate
ycf2 gene + 85629 92450 6822 Locate
ycf15 gene + 92592 92789 198 Locate
trnL-CAA gene − 93044 93124 81 Locate
ndhB gene − 93696 95903 2208 Locate
rps7 gene − 96157 96624 468 Locate
rps12 gene − 96678 97471 794 Locate
trnV-GAC gene + 99134 99205 72 Locate
rrn16S gene + 99426 100916 1491 Locate
trnI-GAU gene + 101214 101301 88 Locate
trnA-UGC gene + 102296 103174 879 Locate
rrn23S gene + 103339 106149 2811 Locate
rrn4.5S gene + 106248 106350 103 Locate
rrn5S gene + 106606 106726 121 Locate
trnR-ACG gene + 106970 107043 74 Locate
trnN-GUU gene − 107616 107687 72 Locate
ycf1 gene + 108029 109159 1131 Locate
ndhF gene − 109053 111284 2232 Locate
rpl32 gene + 111762 111932 171 Locate
trnL-UAG gene + 112659 112738 80 Locate
ccsA gene + 112828 113799 972 Locate
ndhD gene − 114024 115526 1503 Locate
psaC gene − 115644 115889 246 Locate
ndhE gene − 116150 116455 306 Locate
ndhG gene − 116664 117194 531 Locate
ndhI gene − 117557 118063 507 Locate
ndhA gene − 118144 120241 2098 Locate
ndhH gene − 120243 121424 1182 Locate
rps15 gene − 121539 121811 273 Locate
ycf1 gene − 122254 127788 5535 Locate
trnN-GUU gene + 128130 128201 72 Locate
trnR-ACG gene − 128774 128847 74 Locate
rrn5S gene − 129091 129211 121 Locate
rrn4.5S gene − 129467 129569 103 Locate
rrn23S gene − 129668 132478 2811 Locate
trnA-UGC gene − 132643 133521 879 Locate
trnI-GAU gene − 134516 134603 88 Locate
rrn16S gene − 134901 136391 1491 Locate
trnV-GAC gene − 136612 136683 72 Locate
rps12 gene + 138346 139139 794 Locate
rps7 gene + 139193 139660 468 Locate
ndhB gene + 139914 142121 2208 Locate
trnL-CAA gene + 142693 142773 81 Locate
ycf15 gene − 143028 143225 198 Locate
ycf2 gene − 143367 150188 6822 Locate
trnI-CAU gene + 150283 150356 74 Locate
rpl23 gene + 150522 150803 282 Locate
rpl2 gene + 150822 152300 1479 Locate
Status Available
Accession OQ706275.1
Length 152,407 bp
GC content 37.8%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources