Ocimum gratissimum chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_057196.1 · 14–87 bp · −
psbA · NC_057196.1 · 389–1,447 bp · −
trnK-UUU · NC_057196.1 · 1,678–4,255 bp · −
matK · NC_057196.1 · 2,004–3,524 bp · −
rps16 · NC_057196.1 · 4,791–5,924 bp · −
trnQ-UUG · NC_057196.1 · 6,838–6,909 bp · −
trnS-GCU · NC_057196.1 · 8,133–8,220 bp · −
atpA · NC_057196.1 · 10,086–11,609 bp · −
atpF · NC_057196.1 · 11,721–12,960 bp · −
atpH · NC_057196.1 · 13,266–13,511 bp · −
atpI · NC_057196.1 · 14,516–15,259 bp · −
rps2 · NC_057196.1 · 15,485–16,195 bp · −
rpoC2 · NC_057196.1 · 16,413–20,570 bp · −
rpoC1 · NC_057196.1 · 20,747–23,576 bp · −
rpoB · NC_057196.1 · 23,603–26,815 bp · −
psbM · NC_057196.1 · 29,352–29,456 bp · −
trnD-GUC · NC_057196.1 · 29,980–30,053 bp · −
trnY-GUA · NC_057196.1 · 30,170–30,253 bp · −
trnE-UUC · NC_057196.1 · 30,324–30,396 bp · −
trnS-UGA · NC_057196.1 · 35,020–35,112 bp · −
trnM-CAU · NC_057196.1 · 36,111–36,184 bp · −
rps14 · NC_057196.1 · 36,329–36,631 bp · −
psaB · NC_057196.1 · 36,754–38,958 bp · −
psaA · NC_057196.1 · 38,984–41,236 bp · −
ycf3 · NC_057196.1 · 42,047–44,015 bp · −
rps4 · NC_057196.1 · 45,233–45,838 bp · −
trnT-UGU · NC_057196.1 · 46,232–46,304 bp · −
ndhJ · NC_057196.1 · 48,593–49,069 bp · −
ndhK · NC_057196.1 · 49,183–49,860 bp · −
ndhC · NC_057196.1 · 49,912–50,274 bp · −
trnV-UAC · NC_057196.1 · 51,199–51,851 bp · −
atpE · NC_057196.1 · 52,295–52,696 bp · −
atpB · NC_057196.1 · 52,693–54,189 bp · −
psbJ · NC_057196.1 · 63,975–64,097 bp · −
psbL · NC_057196.1 · 64,232–64,348 bp · −
psbF · NC_057196.1 · 64,372–64,491 bp · −
psbE · NC_057196.1 · 64,506–64,757 bp · −
trnW-CCA · NC_057196.1 · 66,140–66,213 bp · −
trnP-UGG · NC_057196.1 · 66,382–66,455 bp · −
rpl20 · NC_057196.1 · 68,210–68,596 bp · −
rps12 · NC_057196.1 · 69,330–69,443 bp · −
rps12 · NC_057196.1 · 97,290–97,532 bp · −
clpP · NC_057196.1 · 69,584–71,500 bp · −
psbN · NC_057196.1 · 73,841–73,972 bp · −
rpoA · NC_057196.1 · 77,372–78,379 bp · −
rps11 · NC_057196.1 · 78,449–78,865 bp · −
rpl36 · NC_057196.1 · 78,975–79,088 bp · −
infA · NC_057196.1 · 79,184–79,417 bp · −
rps8 · NC_057196.1 · 79,547–79,951 bp · −
rpl14 · NC_057196.1 · 80,122–80,490 bp · −
rpl16 · NC_057196.1 · 80,622–81,887 bp · −
rps3 · NC_057196.1 · 82,031–82,693 bp · −
rpl22 · NC_057196.1 · 82,678–83,151 bp · −
rps19 · NC_057196.1 · 83,233–83,511 bp · −
rpl2 · NC_057196.1 · 83,578–85,056 bp · −
rpl23 · NC_057196.1 · 85,075–85,356 bp · −
trnI-CAU · NC_057196.1 · 85,522–85,595 bp · −
trnI-CAA · NC_057196.1 · 93,105–93,185 bp · −
ndhB · NC_057196.1 · 93,757–95,964 bp · −
rps7 · NC_057196.1 · 96,218–96,685 bp · −
rrn4.5S · NC_057196.1 · 106,309–106,573 bp · −
trnN-GUU · NC_057196.1 · 107,676–107,747 bp · −
ndhF · NC_057196.1 · 109,113–111,344 bp · −
ndhD · NC_057196.1 · 114,087–115,586 bp · −
psaC · NC_057196.1 · 115,707–115,952 bp · −
ndhE · NC_057196.1 · 116,213–116,518 bp · −
ndhG · NC_057196.1 · 116,727–117,257 bp · −
ndhI · NC_057196.1 · 117,620–118,126 bp · −
ndhA · NC_057196.1 · 118,207–120,304 bp · −
ndhH · NC_057196.1 · 120,306–121,487 bp · −
rps15 · NC_057196.1 · 121,602–121,874 bp · −
ycf1 · NC_057196.1 · 122,317–127,851 bp · −
trnR-ACG · NC_057196.1 · 128,836–128,909 bp · −
rrn5S · NC_057196.1 · 129,143–129,273 bp · −
rrn23S · NC_057196.1 · 129,730–132,540 bp · −
trnA-UGC · NC_057196.1 · 132,705–133,583 bp · −
trnI-GAU · NC_057196.1 · 133,648–134,665 bp · −
ycf68 · NC_057196.1 · 134,122–134,190 bp · −
rrn16S · NC_057196.1 · 134,963–136,453 bp · −
trnV-GAC · NC_057196.1 · 136,674–136,745 bp · −
ycf15 · NC_057196.1 · 143,090–143,287 bp · −
ycf2 · NC_057196.1 · 143,429–150,250 bp · −
psbK · NC_057196.1 · 7,290–7,469 bp · +
psbI · NC_057196.1 · 7,860–7,970 bp · +
trnR-UCU · NC_057196.1 · 9,911–9,982 bp · +
trnC-GCA · NC_057196.1 · 28,043–28,113 bp · +
petN · NC_057196.1 · 28,276–28,365 bp · +
trnT-GGU · NC_057196.1 · 31,017–31,088 bp · +
psbD · NC_057196.1 · 32,351–33,412 bp · +
psbC · NC_057196.1 · 33,360–34,781 bp · +
psbZ · NC_057196.1 · 35,446–35,634 bp · +
trnG-GCC · NC_057196.1 · 35,879–35,949 bp · +
trnS-GGA · NC_057196.1 · 44,852–44,938 bp · +
trnL-UAA · NC_057196.1 · 47,004–47,563 bp · +
trnF-GAA · NC_057196.1 · 47,846–47,918 bp · +
trnM-CAU · NC_057196.1 · 52,032–52,104 bp · +
rbcL · NC_057196.1 · 54,974–56,407 bp · +
accD · NC_057196.1 · 57,031–58,581 bp · +
psaI · NC_057196.1 · 59,308–59,418 bp · +
ycf4 · NC_057196.1 · 59,866–60,420 bp · +
cemA · NC_057196.1 · 61,069–61,758 bp · +
petA · NC_057196.1 · 61,966–62,928 bp · +
petL · NC_057196.1 · 65,640–65,735 bp · +
petG · NC_057196.1 · 65,904–66,017 bp · +
psaJ · NC_057196.1 · 66,737–66,871 bp · +
rpl33 · NC_057196.1 · 67,315–67,515 bp · +
rps18 · NC_057196.1 · 67,676–67,981 bp · +
psbB · NC_057196.1 · 71,957–73,483 bp · +
psbT · NC_057196.1 · 73,674–73,775 bp · +
psbH · NC_057196.1 · 74,078–74,296 bp · +
petB · NC_057196.1 · 74,431–75,805 bp · +
petD · NC_057196.1 · 75,994–77,200 bp · +
ycf2 · NC_057196.1 · 85,690–92,511 bp · +
ycf15 · NC_057196.1 · 92,653–92,850 bp · +
trnV-GAC · NC_057196.1 · 99,195–99,266 bp · +
rrn16S · NC_057196.1 · 99,487–100,977 bp · +
trnI-GAU · NC_057196.1 · 101,275–102,292 bp · +
ycf68 · NC_057196.1 · 101,750–101,818 bp · +
trnA-UGC · NC_057196.1 · 102,357–103,235 bp · +
rrn23S · NC_057196.1 · 103,400–106,210 bp · +
rrn5S · NC_057196.1 · 106,667–106,797 bp · +
trnR-ACG · NC_057196.1 · 107,031–107,104 bp · +
ycf1 · NC_057196.1 · 108,089–109,219 bp · +
rpl32 · NC_057196.1 · 111,823–111,993 bp · +
trnL-UAG · NC_057196.1 · 112,720–112,799 bp · +
ccsA · NC_057196.1 · 112,889–113,860 bp · +
trnN-GUU · NC_057196.1 · 128,193–128,264 bp · +
rrn4.5S · NC_057196.1 · 129,367–129,631 bp · +
rps7 · NC_057196.1 · 139,255–139,722 bp · +
ndhB · NC_057196.1 · 139,976–142,183 bp · +
trnL-CAA · NC_057196.1 · 142,755–142,835 bp · +
trnI-CAU · NC_057196.1 · 150,345–150,418 bp · +
rpl23 · NC_057196.1 · 150,584–150,865 bp · +
rpl2 · NC_057196.1 · 150,884–152,362 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Ocimum gratissimum
ANNOTATED PLASTOME
NC_057196.1
152,469 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38117 76234 114352 152469 bp
Forward strand 5′ → 3′
psbK psbI trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU ycf68 trnA-UGC rrn23S rrn5S trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rrn4.5S rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnI-CAA ndhB rps7 rps12 rrn4.5S trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn23S trnA-UGC trnI-GAU ycf68 rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 14 87 74 Locate
psbA gene − 389 1447 1059 Locate
trnK-UUU gene − 1678 4255 2578 Locate
matK gene − 2004 3524 1521 Locate
rps16 gene − 4791 5924 1134 Locate
trnQ-UUG gene − 6838 6909 72 Locate
psbK gene + 7290 7469 180 Locate
psbI gene + 7860 7970 111 Locate
trnS-GCU gene − 8133 8220 88 Locate
trnR-UCU gene + 9911 9982 72 Locate
atpA gene − 10086 11609 1524 Locate
atpF gene − 11721 12960 1240 Locate
atpH gene − 13266 13511 246 Locate
atpI gene − 14516 15259 744 Locate
rps2 gene − 15485 16195 711 Locate
rpoC2 gene − 16413 20570 4158 Locate
rpoC1 gene − 20747 23576 2830 Locate
rpoB gene − 23603 26815 3213 Locate
trnC-GCA gene + 28043 28113 71 Locate
petN gene + 28276 28365 90 Locate
psbM gene − 29352 29456 105 Locate
trnD-GUC gene − 29980 30053 74 Locate
trnY-GUA gene − 30170 30253 84 Locate
trnE-UUC gene − 30324 30396 73 Locate
trnT-GGU gene + 31017 31088 72 Locate
psbD gene + 32351 33412 1062 Locate
psbC gene + 33360 34781 1422 Locate
trnS-UGA gene − 35020 35112 93 Locate
psbZ gene + 35446 35634 189 Locate
trnG-GCC gene + 35879 35949 71 Locate
trnM-CAU gene − 36111 36184 74 Locate
rps14 gene − 36329 36631 303 Locate
psaB gene − 36754 38958 2205 Locate
psaA gene − 38984 41236 2253 Locate
ycf3 gene − 42047 44015 1969 Locate
trnS-GGA gene + 44852 44938 87 Locate
rps4 gene − 45233 45838 606 Locate
trnT-UGU gene − 46232 46304 73 Locate
trnL-UAA gene + 47004 47563 560 Locate
trnF-GAA gene + 47846 47918 73 Locate
ndhJ gene − 48593 49069 477 Locate
ndhK gene − 49183 49860 678 Locate
ndhC gene − 49912 50274 363 Locate
trnV-UAC gene − 51199 51851 653 Locate
trnM-CAU gene + 52032 52104 73 Locate
atpE gene − 52295 52696 402 Locate
atpB gene − 52693 54189 1497 Locate
rbcL gene + 54974 56407 1434 Locate
accD gene + 57031 58581 1551 Locate
psaI gene + 59308 59418 111 Locate
ycf4 gene + 59866 60420 555 Locate
cemA gene + 61069 61758 690 Locate
petA gene + 61966 62928 963 Locate
psbJ gene − 63975 64097 123 Locate
psbL gene − 64232 64348 117 Locate
psbF gene − 64372 64491 120 Locate
psbE gene − 64506 64757 252 Locate
petL gene + 65640 65735 96 Locate
petG gene + 65904 66017 114 Locate
trnW-CCA gene − 66140 66213 74 Locate
trnP-UGG gene − 66382 66455 74 Locate
psaJ gene + 66737 66871 135 Locate
rpl33 gene + 67315 67515 201 Locate
rps18 gene + 67676 67981 306 Locate
rpl20 gene − 68210 68596 387 Locate
rps12 gene − 69330 69443 114 Locate
clpP gene − 69584 71500 1917 Locate
psbB gene + 71957 73483 1527 Locate
psbT gene + 73674 73775 102 Locate
psbN gene − 73841 73972 132 Locate
psbH gene + 74078 74296 219 Locate
petB gene + 74431 75805 1375 Locate
petD gene + 75994 77200 1207 Locate
rpoA gene − 77372 78379 1008 Locate
rps11 gene − 78449 78865 417 Locate
rpl36 gene − 78975 79088 114 Locate
infA gene − 79184 79417 234 Locate
rps8 gene − 79547 79951 405 Locate
rpl14 gene − 80122 80490 369 Locate
rpl16 gene − 80622 81887 1266 Locate
rps3 gene − 82031 82693 663 Locate
rpl22 gene − 82678 83151 474 Locate
rps19 gene − 83233 83511 279 Locate
rpl2 gene − 83578 85056 1479 Locate
rpl23 gene − 85075 85356 282 Locate
trnI-CAU gene − 85522 85595 74 Locate
ycf2 gene + 85690 92511 6822 Locate
ycf15 gene + 92653 92850 198 Locate
trnI-CAA gene − 93105 93185 81 Locate
ndhB gene − 93757 95964 2208 Locate
rps7 gene − 96218 96685 468 Locate
rps12 gene − 97290 97532 243 Locate
trnV-GAC gene + 99195 99266 72 Locate
rrn16S gene + 99487 100977 1491 Locate
trnI-GAU gene + 101275 102292 1018 Locate
ycf68 gene + 101750 101818 69 Locate
trnA-UGC gene + 102357 103235 879 Locate
rrn23S gene + 103400 106210 2811 Locate
rrn4.5S gene − 106309 106573 265 Locate
rrn5S gene + 106667 106797 131 Locate
trnR-ACG gene + 107031 107104 74 Locate
trnN-GUU gene − 107676 107747 72 Locate
ycf1 gene + 108089 109219 1131 Locate
ndhF gene − 109113 111344 2232 Locate
rpl32 gene + 111823 111993 171 Locate
trnL-UAG gene + 112720 112799 80 Locate
ccsA gene + 112889 113860 972 Locate
ndhD gene − 114087 115586 1500 Locate
psaC gene − 115707 115952 246 Locate
ndhE gene − 116213 116518 306 Locate
ndhG gene − 116727 117257 531 Locate
ndhI gene − 117620 118126 507 Locate
ndhA gene − 118207 120304 2098 Locate
ndhH gene − 120306 121487 1182 Locate
rps15 gene − 121602 121874 273 Locate
ycf1 gene − 122317 127851 5535 Locate
trnN-GUU gene + 128193 128264 72 Locate
trnR-ACG gene − 128836 128909 74 Locate
rrn5S gene − 129143 129273 131 Locate
rrn4.5S gene + 129367 129631 265 Locate
rrn23S gene − 129730 132540 2811 Locate
trnA-UGC gene − 132705 133583 879 Locate
trnI-GAU gene − 133648 134665 1018 Locate
ycf68 gene − 134122 134190 69 Locate
rrn16S gene − 134963 136453 1491 Locate
trnV-GAC gene − 136674 136745 72 Locate
rps7 gene + 139255 139722 468 Locate
ndhB gene + 139976 142183 2208 Locate
trnL-CAA gene + 142755 142835 81 Locate
ycf15 gene − 143090 143287 198 Locate
ycf2 gene − 143429 150250 6822 Locate
trnI-CAU gene + 150345 150418 74 Locate
rpl23 gene + 150584 150865 282 Locate
rpl2 gene + 150884 152362 1479 Locate
Status Available
Accession NC_057196.1
Length 152,469 bp
GC content 37.8%
Annotated genes 133
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 17 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources